RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 MRPS26Q9BYN8 205 aaKnown RBP11.62□□□□□ -0.55
PRPF40A-202ENST00000410080 CLPBQ9H078 707 aa11.62□□□□□ -0.55
PRPF40A-202ENST00000410080 RUVBL2Q9Y230 463 aaKnown RBP11.62□□□□□ -0.55
PRPF40A-202ENST00000410080 CDHR2Q9BYE9 1310 aa11.62□□□□□ -0.55
PRPF40A-202ENST00000410080 CCDC189A1A4V9 331 aa11.62□□□□□ -0.55
PRPF40A-202ENST00000410080 GMFGO60234 142 aa11.62□□□□□ -0.55
PRPF40A-202ENST00000410080 LRRC8DQ7L1W4 858 aa11.62□□□□□ -0.55
PRPF40A-202ENST00000410080 SETD3Q86TU7 594 aaPredicted RBP11.62□□□□□ -0.55
PRPF40A-202ENST00000410080 IZUMO1Q8IYV9 350 aa11.62□□□□□ -0.55
PRPF40A-202ENST00000410080 ADGRE3Q9BY15 652 aa11.62□□□□□ -0.55
PRPF40A-202ENST00000410080 SMARCAL1Q9NZC9 954 aa11.62□□□□□ -0.55
PRPF40A-202ENST00000410080 MBD5Q9P267 1494 aa11.62□□□□□ -0.55
PRPF40A-202ENST00000410080 CYB561D2O14569 222 aa11.62□□□□□ -0.55
PRPF40A-202ENST00000410080 MSH4O15457 936 aa11.62□□□□□ -0.55
PRPF40A-202ENST00000410080 FDX1P10109 184 aa11.62□□□□□ -0.55
PRPF40A-202ENST00000410080 USP11P51784 963 aa11.62□□□□□ -0.55
PRPF40A-202ENST00000410080 ANKRD13AQ8IZ07 590 aa11.62□□□□□ -0.55
PRPF40A-202ENST00000410080 ST13P5Q8NFI4 369 aaPredicted RBP11.62□□□□□ -0.55
PRPF40A-202ENST00000410080 KIFC1Q9BW19 673 aa11.62□□□□□ -0.55
PRPF40A-202ENST00000410080 YIPF3Q9GZM5 350 aa11.62□□□□□ -0.55
PRPF40A-202ENST00000410080 RHBGQ9H310 441 aa11.62□□□□□ -0.55
PRPF40A-202ENST00000410080 ARHGEF40Q8TER5 1519 aa11.62□□□□□ -0.55
PRPF40A-202ENST00000410080 STK36Q9NRP7 1315 aa11.62□□□□□ -0.55
PRPF40A-202ENST00000410080 ESYT3A0FGR9 886 aa11.62□□□□□ -0.55
PRPF40A-202ENST00000410080 BMP10O95393 424 aa11.62□□□□□ -0.55
PRPF40A-202ENST00000410080 ALDH2P05091 517 aa11.62□□□□□ -0.55
PRPF40A-202ENST00000410080 GPD1P21695 349 aa11.62□□□□□ -0.55
PRPF40A-202ENST00000410080 GTF2H1P32780 548 aa11.62□□□□□ -0.55
PRPF40A-202ENST00000410080 MMRN1Q13201 1228 aa11.62□□□□□ -0.55
PRPF40A-202ENST00000410080 C9orf131Q5VYM1 1079 aa11.62□□□□□ -0.55
PRPF40A-202ENST00000410080 CES5AQ6NT32 575 aa11.62□□□□□ -0.55
PRPF40A-202ENST00000410080 R3HCC1LQ7Z5L2 792 aaKnown RBP11.62□□□□□ -0.55
PRPF40A-202ENST00000410080 SCFD2Q8WU76 684 aa11.62□□□□□ -0.55
PRPF40A-202ENST00000410080 THAP11Q96EK4 314 aa11.62□□□□□ -0.55
PRPF40A-202ENST00000410080 PRRG4Q9BZD6 226 aa11.62□□□□□ -0.55
PRPF40A-202ENST00000410080 RIC8BQ9NVN3 520 aa11.62□□□□□ -0.55
PRPF40A-202ENST00000410080 CHMP2BQ9UQN3 213 aa11.62□□□□□ -0.55
PRPF40A-202ENST00000410080 CAMSAP1Q5T5Y3 1602 aa11.62□□□□□ -0.55
PRPF40A-202ENST00000410080 LGALS16A8MUM7 142 aa11.62□□□□□ -0.55
PRPF40A-202ENST00000410080 SOAT2O75908 522 aa11.62□□□□□ -0.55
PRPF40A-202ENST00000410080 COX10Q12887 443 aa11.62□□□□□ -0.55
PRPF40A-202ENST00000410080 CDC42EP5Q6NZY7 148 aa11.62□□□□□ -0.55
PRPF40A-202ENST00000410080 MB21D2Q8IYB1 491 aaPredicted RBP11.62□□□□□ -0.55
PRPF40A-202ENST00000410080 TRMT2AQ8IZ69 625 aaKnown RBP11.62□□□□□ -0.55
PRPF40A-202ENST00000410080 OLFM1Q99784 485 aa11.62□□□□□ -0.55
PRPF40A-202ENST00000410080 IL1RAPL1Q9NZN1 696 aa11.62□□□□□ -0.55
PRPF40A-202ENST00000410080 TMCC3Q9ULS5 477 aa11.62□□□□□ -0.55
PRPF40A-202ENST00000410080 ZNF500O60304 480 aaPredicted RBP11.62□□□□□ -0.55
PRPF40A-202ENST00000410080 C21orf59P57076 290 aa11.62□□□□□ -0.55
PRPF40A-202ENST00000410080 RAB14P61106 215 aa11.62□□□□□ -0.55
PRPF40A-202ENST00000410080 SNAP47Q5SQN1 464 aa11.62□□□□□ -0.55
PRPF40A-202ENST00000410080 GPAT2Q6NUI2 795 aa11.62□□□□□ -0.55
PRPF40A-202ENST00000410080 DENND5BQ6ZUT9 1274 aa11.62□□□□□ -0.55
PRPF40A-202ENST00000410080 TRPC4APQ8TEL6 797 aa11.62□□□□□ -0.55
PRPF40A-202ENST00000410080 GPRASP2Q96D09 838 aa11.62□□□□□ -0.55
PRPF40A-202ENST00000410080 MTFMTQ96DP5 389 aaKnown RBP11.62□□□□□ -0.55
PRPF40A-202ENST00000410080 PGLYRP2Q96PD5 576 aa11.62□□□□□ -0.55
PRPF40A-202ENST00000410080 OSBPL5Q9H0X9 879 aaPredicted RBP11.62□□□□□ -0.55
PRPF40A-202ENST00000410080 DBR1Q9UK59 544 aaKnown RBP11.62□□□□□ -0.55
PRPF40A-202ENST00000410080 ATMINO43313 823 aaPredicted RBP11.61□□□□□ -0.55
PRPF40A-202ENST00000410080 DEAF1O75398 565 aaPredicted RBP11.61□□□□□ -0.55
PRPF40A-202ENST00000410080 POMCP01189 267 aa11.61□□□□□ -0.55
PRPF40A-202ENST00000410080 TGM2P21980 687 aa11.61□□□□□ -0.55
PRPF40A-202ENST00000410080 STX4Q12846 297 aa11.61□□□□□ -0.55
PRPF40A-202ENST00000410080 EZH2Q15910 746 aaKnown RBP11.61□□□□□ -0.55
PRPF40A-202ENST00000410080 E2F4Q16254 413 aa11.61□□□□□ -0.55
PRPF40A-202ENST00000410080 FAM83EQ2M2I3 478 aa11.61□□□□□ -0.55
PRPF40A-202ENST00000410080 XKR3Q5GH77 459 aa11.61□□□□□ -0.55
PRPF40A-202ENST00000410080 C1QTNF7Q9BXJ2 289 aa11.61□□□□□ -0.55
PRPF40A-202ENST00000410080 CLK2P49760 499 aaKnown RBP11.61□□□□□ -0.55
PRPF40A-202ENST00000410080 PSMC6P62333 389 aa11.61□□□□□ -0.55
PRPF40A-202ENST00000410080 STX3Q13277 289 aa11.61□□□□□ -0.55
PRPF40A-202ENST00000410080 PTK7Q13308 1070 aa11.61□□□□□ -0.55
PRPF40A-202ENST00000410080 PLD1Q13393 1074 aa11.61□□□□□ -0.55
PRPF40A-202ENST00000410080 SEPT1Q8WYJ6 367 aa11.61□□□□□ -0.55
PRPF40A-202ENST00000410080 OSBPL1AQ9BXW6 950 aa11.61□□□□□ -0.55
PRPF40A-202ENST00000410080 TRABDQ9H4I3 376 aa11.61□□□□□ -0.55
PRPF40A-202ENST00000410080 TAF1DQ9H5J8 278 aaPredicted RBP11.61□□□□□ -0.55
PRPF40A-202ENST00000410080 INTS13Q9NVM9 706 aa11.61□□□□□ -0.55
PRPF40A-202ENST00000410080 ALKBH4Q9NXW9 302 aa11.61□□□□□ -0.55
PRPF40A-202ENST00000410080 TRIM17Q9Y577 477 aa11.61□□□□□ -0.55
PRPF40A-202ENST00000410080 ZNF682O95780 498 aa11.61□□□□□ -0.55
PRPF40A-202ENST00000410080 SLC25A27O95847 323 aa11.61□□□□□ -0.55
PRPF40A-202ENST00000410080 CCDC130P13994 396 aa11.61□□□□□ -0.55
PRPF40A-202ENST00000410080 HSPA9P38646 679 aaKnown RBP11.61□□□□□ -0.55
PRPF40A-202ENST00000410080 LONRF1Q17RB8 773 aa11.61□□□□□ -0.55
PRPF40A-202ENST00000410080 RDM1Q8NG50 284 aa11.61□□□□□ -0.55
PRPF40A-202ENST00000410080 GMCL1Q96IK5 515 aa11.61□□□□□ -0.55
PRPF40A-202ENST00000410080 AMHP03971 560 aa11.61□□□□□ -0.55
PRPF40A-202ENST00000410080 TAF6P49848 677 aa11.61□□□□□ -0.55
PRPF40A-202ENST00000410080 INAQ16352 499 aa11.61□□□□□ -0.55
PRPF40A-202ENST00000410080 PPM1LQ5SGD2 360 aa11.61□□□□□ -0.55
PRPF40A-202ENST00000410080 MROH9Q5TGP6 573 aa11.61□□□□□ -0.55
PRPF40A-202ENST00000410080 LINC00523Q86TU6 105 aa11.61□□□□□ -0.55
PRPF40A-202ENST00000410080 DEFB129Q9H1M3 183 aa11.61□□□□□ -0.55
PRPF40A-202ENST00000410080 ETNK1Q9HBU6 452 aa11.61□□□□□ -0.55
PRPF40A-202ENST00000410080 PRKAG3Q9UGI9 489 aa11.61□□□□□ -0.55
PRPF40A-202ENST00000410080 DAGLAQ9Y4D2 1042 aa11.61□□□□□ -0.55
PRPF40A-202ENST00000410080 C16orf96A6NNT2 1141 aa11.61□□□□□ -0.55
PRPF40A-202ENST00000410080 HBP1O60381 514 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms