RNA–Protein interactions for RNA: ENST00000409860.1

C4orf48-202, Transcript of chromosome 4 open reading frame 48, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C4orf48, Length 477 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf48-202ENST00000409860 SYT11Q9BT88 431 aa21.75■■□□□ 1.07
C4orf48-202ENST00000409860 ADAM7Q9H2U9 754 aa21.75■■□□□ 1.07
C4orf48-202ENST00000409860 FBXO44Q9H4M3 255 aa21.75■■□□□ 1.07
C4orf48-202ENST00000409860 ASAH2Q9NR71 780 aa21.75■■□□□ 1.07
C4orf48-202ENST00000409860 ST7Q9NRC1 585 aa21.75■■□□□ 1.07
C4orf48-202ENST00000409860 UXTQ9UBK9 157 aaPredicted RBP21.75■■□□□ 1.07
C4orf48-202ENST00000409860 CD207Q9UJ71 328 aa21.75■■□□□ 1.07
C4orf48-202ENST00000409860 PTPRDP23468 1912 aa21.74■■□□□ 1.07
C4orf48-202ENST00000409860 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.74■■□□□ 1.07
C4orf48-202ENST00000409860 CYP1A1P04798 512 aaPredicted RBP21.74■■□□□ 1.07
C4orf48-202ENST00000409860 KCNA5P22460 613 aa21.74■■□□□ 1.07
C4orf48-202ENST00000409860 KIF11P52732 1056 aa21.74■■□□□ 1.07
C4orf48-202ENST00000409860 SNX16P57768 344 aa21.74■■□□□ 1.07
C4orf48-202ENST00000409860 NOMO3P69849 1222 aa21.74■■□□□ 1.07
C4orf48-202ENST00000409860 CDK17Q00537 523 aa21.74■■□□□ 1.07
C4orf48-202ENST00000409860 IFRD2Q12894 506 aaPredicted RBP21.74■■□□□ 1.07
C4orf48-202ENST00000409860 CLEC16AQ2KHT3 1053 aa21.74■■□□□ 1.07
C4orf48-202ENST00000409860 NAA35Q5VZE5 725 aa21.74■■□□□ 1.07
C4orf48-202ENST00000409860 GPRIN1Q7Z2K8 1008 aa21.74■■□□□ 1.07
C4orf48-202ENST00000409860 SIX6OS1Q8N1H7 587 aa21.74■■□□□ 1.07
C4orf48-202ENST00000409860 WDTC1Q8N5D0 677 aa21.74■■□□□ 1.07
C4orf48-202ENST00000409860 TRMT2BQ96GJ1 504 aaKnown RBP21.74■■□□□ 1.07
C4orf48-202ENST00000409860 PCDHB18PQ96TA0 734 aa21.74■■□□□ 1.07
C4orf48-202ENST00000409860 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP21.74■■□□□ 1.07
C4orf48-202ENST00000409860 TTLL2Q9BWV7 592 aa21.74■■□□□ 1.07
C4orf48-202ENST00000409860 DEF6Q9H4E7 631 aa21.74■■□□□ 1.07
C4orf48-202ENST00000409860 CYLDQ9NQC7 956 aa21.74■■□□□ 1.07
C4orf48-202ENST00000409860 ARHGAP20Q9P2F6 1191 aa21.74■■□□□ 1.07
C4orf48-202ENST00000409860 COG5Q9UP83 839 aa21.74■■□□□ 1.07
C4orf48-202ENST00000409860 MTCL1Q9Y4B5 1905 aaKnown RBP21.73■■□□□ 1.07
C4orf48-202ENST00000409860 SSU72P8A0A1W2PR75 194 aa21.73■■□□□ 1.07
C4orf48-202ENST00000409860 FGF19O95750 216 aa21.73■■□□□ 1.07
C4orf48-202ENST00000409860 PLEKP08567 350 aaPredicted RBP21.73■■□□□ 1.07
C4orf48-202ENST00000409860 HMGA1P17096 107 aaKnown RBP21.73■■□□□ 1.07
C4orf48-202ENST00000409860 YWHAQP27348 245 aa21.73■■□□□ 1.07
C4orf48-202ENST00000409860 TKTL1P51854 596 aa21.73■■□□□ 1.07
C4orf48-202ENST00000409860 ADIGQ0VDE8 80 aa21.73■■□□□ 1.07
C4orf48-202ENST00000409860 CLUL1Q15846 466 aa21.73■■□□□ 1.07
C4orf48-202ENST00000409860 RAB41Q5JT25 222 aa21.73■■□□□ 1.07
C4orf48-202ENST00000409860 ATAT1Q5SQI0 421 aa21.73■■□□□ 1.07
C4orf48-202ENST00000409860 CYP4A22Q5TCH4 519 aa21.73■■□□□ 1.07
C4orf48-202ENST00000409860 PPP1R2P3Q6NXS1 205 aa21.73■■□□□ 1.07
C4orf48-202ENST00000409860 GRASPQ7Z6J2 395 aaPredicted RBP21.73■■□□□ 1.07
C4orf48-202ENST00000409860 SCAMP5Q8TAC9 235 aa21.73■■□□□ 1.07
C4orf48-202ENST00000409860 PPP1R13BQ96KQ4 1090 aa21.73■■□□□ 1.07
C4orf48-202ENST00000409860 MYRFLQ96LU7 910 aa21.73■■□□□ 1.07
C4orf48-202ENST00000409860 RIPOR3Q96MK2 946 aa21.73■■□□□ 1.07
C4orf48-202ENST00000409860 SLC4A5Q9BY07 1137 aa21.73■■□□□ 1.07
C4orf48-202ENST00000409860 S1PR5Q9H228 398 aa21.73■■□□□ 1.07
C4orf48-202ENST00000409860 SYNCQ9H7C4 482 aa21.73■■□□□ 1.07
C4orf48-202ENST00000409860 DNMT3BQ9UBC3 853 aaKnown RBP21.73■■□□□ 1.07
C4orf48-202ENST00000409860 CYTH4Q9UIA0 394 aa21.73■■□□□ 1.07
C4orf48-202ENST00000409860 SZT2Q5T011 3432 aa21.73■■□□□ 1.07
C4orf48-202ENST00000409860 H3BQ06 376 aaPredicted RBP21.72■■□□□ 1.07
C4orf48-202ENST00000409860 RHOP08100 348 aa21.72■■□□□ 1.07
C4orf48-202ENST00000409860 LCP1P13796 627 aa21.72■■□□□ 1.07
C4orf48-202ENST00000409860 EIF4A3P38919 411 aaKnown RBP21.72■■□□□ 1.07
C4orf48-202ENST00000409860 MTHFRP42898 656 aa21.72■■□□□ 1.07
C4orf48-202ENST00000409860 NSFP46459 744 aaKnown RBP21.72■■□□□ 1.07
C4orf48-202ENST00000409860 RPL34P49207 117 aaKnown RBP21.72■■□□□ 1.07
C4orf48-202ENST00000409860 USP46P62068 366 aa21.72■■□□□ 1.07
C4orf48-202ENST00000409860 MAPK8IP2Q13387 824 aaPredicted RBP21.72■■□□□ 1.07
C4orf48-202ENST00000409860 PABPC1LQ4VXU2 614 aaKnown RBP21.72■■□□□ 1.07
C4orf48-202ENST00000409860 PDZD4Q76G19 769 aaPredicted RBP21.72■■□□□ 1.07
C4orf48-202ENST00000409860 SMRP1Q8NCR6 262 aa21.72■■□□□ 1.07
C4orf48-202ENST00000409860 CPA5Q8WXQ8 436 aa21.72■■□□□ 1.07
C4orf48-202ENST00000409860 FBXO32Q969P5 355 aa21.72■■□□□ 1.07
C4orf48-202ENST00000409860 SLITRK1Q96PX8 696 aa21.72■■□□□ 1.07
C4orf48-202ENST00000409860 GCNAQ96QF7 691 aa21.72■■□□□ 1.07
C4orf48-202ENST00000409860 MIS12Q9H081 205 aa21.72■■□□□ 1.07
C4orf48-202ENST00000409860 HCFC1R1Q9NWW0 138 aa21.72■■□□□ 1.07
C4orf48-202ENST00000409860 IL37Q9NZH6 218 aa21.72■■□□□ 1.07
C4orf48-202ENST00000409860 DDX3XO00571 662 aaKnown RBP eCLIP21.71■■□□□ 1.073e-9■■■■■ 68
C4orf48-202ENST00000409860 FBXO21O94952 628 aa21.71■■□□□ 1.07
C4orf48-202ENST00000409860 MYL4P12829 197 aa21.71■■□□□ 1.07
C4orf48-202ENST00000409860 UNGP13051 313 aaPredicted RBP21.71■■□□□ 1.07
C4orf48-202ENST00000409860 CDC25CP30307 473 aa21.71■■□□□ 1.07
C4orf48-202ENST00000409860 EPHA5P54756 1037 aa21.71■■□□□ 1.07
C4orf48-202ENST00000409860 CENPCQ03188 943 aa21.71■■□□□ 1.07
C4orf48-202ENST00000409860 TMEM110Q86TL2 294 aa21.71■■□□□ 1.07
C4orf48-202ENST00000409860 ERICH1Q86X53 443 aa21.71■■□□□ 1.07
C4orf48-202ENST00000409860 TMC8Q8IU68 726 aa21.71■■□□□ 1.07
C4orf48-202ENST00000409860 HS6ST3Q8IZP7 471 aa21.71■■□□□ 1.07
C4orf48-202ENST00000409860 OLIG1Q8TAK6 271 aa21.71■■□□□ 1.07
C4orf48-202ENST00000409860 CCDC42Q96M95 316 aa21.71■■□□□ 1.07
C4orf48-202ENST00000409860 CPXM1Q96SM3 734 aa21.71■■□□□ 1.07
C4orf48-202ENST00000409860 ULBP1Q9BZM6 244 aa21.71■■□□□ 1.07
C4orf48-202ENST00000409860 ZNF334Q9HCZ1 680 aaPredicted RBP21.71■■□□□ 1.07
C4orf48-202ENST00000409860 CNGB3Q9NQW8 809 aa21.71■■□□□ 1.07
C4orf48-202ENST00000409860 ADAMTS1Q9UHI8 967 aa21.71■■□□□ 1.07
C4orf48-202ENST00000409860 SCML2Q9UQR0 700 aa21.71■■□□□ 1.07
C4orf48-202ENST00000409860 USP3Q9Y6I4 520 aa21.71■■□□□ 1.07
C4orf48-202ENST00000409860 FAM92AA1XBS5 289 aa21.7■■□□□ 1.06
C4orf48-202ENST00000409860 E5RJQ4 531 aa21.7■■□□□ 1.06
C4orf48-202ENST00000409860 ZNF197O14709 1029 aa21.7■■□□□ 1.06
C4orf48-202ENST00000409860 AKR1B10O60218 316 aa21.7■■□□□ 1.06
C4orf48-202ENST00000409860 ZBED1O96006 694 aa21.7■■□□□ 1.06
C4orf48-202ENST00000409860 TAF10Q12962 218 aa21.7■■□□□ 1.06
C4orf48-202ENST00000409860 SMAD4Q13485 552 aaKnown RBP21.7■■□□□ 1.06
C4orf48-202ENST00000409860 PTPN20Q4JDL3 420 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms