RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 SLC9A3R1O14745 358 aaPredicted RBP17.84■□□□□ 0.45
CHMP3-203ENST00000409225 ATP2C2O75185 946 aa17.84■□□□□ 0.45
CHMP3-203ENST00000409225 ADH1CP00326 375 aa17.84■□□□□ 0.45
CHMP3-203ENST00000409225 FTH1P19P0C7X4 201 aa17.84■□□□□ 0.45
CHMP3-203ENST00000409225 ADH5P11766 374 aa17.84■□□□□ 0.45
CHMP3-203ENST00000409225 PFKLP17858 780 aa17.84■□□□□ 0.45
CHMP3-203ENST00000409225 PLCG1P19174 1290 aa17.84■□□□□ 0.45
CHMP3-203ENST00000409225 PCSK1P29120 753 aa17.84■□□□□ 0.45
CHMP3-203ENST00000409225 ABCD1P33897 745 aa17.84■□□□□ 0.45
CHMP3-203ENST00000409225 MAGEA11P43364 429 aa17.84■□□□□ 0.45
CHMP3-203ENST00000409225 TNFRSF4P43489 277 aa17.84■□□□□ 0.45
CHMP3-203ENST00000409225 POU5F1Q01860 360 aaKnown RBP17.84■□□□□ 0.45
CHMP3-203ENST00000409225 ZNF33AQ06730 810 aa17.84■□□□□ 0.45
CHMP3-203ENST00000409225 SLC36A4Q6YBV0 504 aa17.84■□□□□ 0.45
CHMP3-203ENST00000409225 HNRNPLLQ8WVV9 542 aaKnown RBP17.84■□□□□ 0.45
CHMP3-203ENST00000409225 MYLPFQ96A32 169 aa17.84■□□□□ 0.45
CHMP3-203ENST00000409225 FAM213AQ9BRX8 229 aa17.84■□□□□ 0.45
CHMP3-203ENST00000409225 RNF38Q9H0F5 515 aa17.84■□□□□ 0.45
CHMP3-203ENST00000409225 DNAAF2Q9NVR5 837 aaKnown RBP17.84■□□□□ 0.45
CHMP3-203ENST00000409225 CALCOCO1Q9P1Z2 691 aa17.84■□□□□ 0.45
CHMP3-203ENST00000409225 CFAP97Q9P2B7 532 aa17.84■□□□□ 0.45
CHMP3-203ENST00000409225 MAGEC2Q9UBF1 373 aaPredicted RBP17.84■□□□□ 0.45
CHMP3-203ENST00000409225 IGSF10Q6WRI0 2623 aa17.83■□□□□ 0.44
CHMP3-203ENST00000409225 LOC400499M0QZD8 3231 aa17.83■□□□□ 0.44
CHMP3-203ENST00000409225 CEP192Q8TEP8 1941 aa17.83■□□□□ 0.44
CHMP3-203ENST00000409225 A0A0A0MRY4 1105 aa17.83■□□□□ 0.44
CHMP3-203ENST00000409225 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.83■□□□□ 0.44
CHMP3-203ENST00000409225 ABL1P00519 1130 aa17.83■□□□□ 0.44
CHMP3-203ENST00000409225 SYPP08247 313 aa17.83■□□□□ 0.44
CHMP3-203ENST00000409225 KRT19P08727 400 aa17.83■□□□□ 0.44
CHMP3-203ENST00000409225 GABRG2P18507 467 aa17.83■□□□□ 0.44
CHMP3-203ENST00000409225 BDNFP23560 247 aa17.83■□□□□ 0.44
CHMP3-203ENST00000409225 ADSSP30520 456 aa17.83■□□□□ 0.44
CHMP3-203ENST00000409225 GRIK1P39086 918 aa17.83■□□□□ 0.44
CHMP3-203ENST00000409225 LHX1P48742 406 aa17.83■□□□□ 0.44
CHMP3-203ENST00000409225 PSMC1P62191 440 aaKnown RBP17.83■□□□□ 0.44
CHMP3-203ENST00000409225 SLC7A9P82251 487 aa17.83■□□□□ 0.44
CHMP3-203ENST00000409225 MCTP1Q6DN14 999 aa17.83■□□□□ 0.44
CHMP3-203ENST00000409225 C4orf50Q6ZRC1 276 aa17.83■□□□□ 0.44
CHMP3-203ENST00000409225 DENND5BQ6ZUT9 1274 aa17.83■□□□□ 0.44
CHMP3-203ENST00000409225 CSGALNACT2Q8N6G5 542 aa17.83■□□□□ 0.44
CHMP3-203ENST00000409225 TOP6BLQ8N6T0 577 aa17.83■□□□□ 0.44
CHMP3-203ENST00000409225 LRRC52Q8N7C0 313 aa17.83■□□□□ 0.44
CHMP3-203ENST00000409225 SPRYD3Q8NCJ5 442 aa17.83■□□□□ 0.44
CHMP3-203ENST00000409225 ZSWIM2Q8NEG5 633 aa17.83■□□□□ 0.44
CHMP3-203ENST00000409225 MDM1Q8TC05 714 aa17.83■□□□□ 0.44
CHMP3-203ENST00000409225 ADAMTS14Q8WXS8 1223 aa17.83■□□□□ 0.44
CHMP3-203ENST00000409225 CALML4Q96GE6 196 aa17.83■□□□□ 0.44
CHMP3-203ENST00000409225 SPATA17Q96L03 361 aa17.83■□□□□ 0.44
CHMP3-203ENST00000409225 BLOC1S4Q9NUP1 217 aa17.83■□□□□ 0.44
CHMP3-203ENST00000409225 TBC1D3BA6NDS4 549 aa17.82■□□□□ 0.44
CHMP3-203ENST00000409225 ZNF840PA6NDX5 716 aa17.82■□□□□ 0.44
CHMP3-203ENST00000409225 EIF4E1BA6NMX2 242 aaKnown RBP17.82■□□□□ 0.44
CHMP3-203ENST00000409225 GABRDO14764 452 aa17.82■□□□□ 0.44
CHMP3-203ENST00000409225 ANXA13P27216 316 aa17.82■□□□□ 0.44
CHMP3-203ENST00000409225 WASP42768 502 aa17.82■□□□□ 0.44
CHMP3-203ENST00000409225 POSTNQ15063 836 aa17.82■□□□□ 0.44
CHMP3-203ENST00000409225 RILPL1Q5EBL4 403 aa17.82■□□□□ 0.44
CHMP3-203ENST00000409225 FAM171BQ6P995 826 aa17.82■□□□□ 0.44
CHMP3-203ENST00000409225 CCNI2Q6ZMN8 369 aaPredicted RBP17.82■□□□□ 0.44
CHMP3-203ENST00000409225 SLC41A1Q8IVJ1 513 aa17.82■□□□□ 0.44
CHMP3-203ENST00000409225 ZNF513Q8N8E2 541 aaPredicted RBP17.82■□□□□ 0.44
CHMP3-203ENST00000409225 NAT16Q8N8M0 369 aa17.82■□□□□ 0.44
CHMP3-203ENST00000409225 CACTINQ8WUQ7 758 aaKnown RBP17.82■□□□□ 0.44
CHMP3-203ENST00000409225 ERLEC1Q96DZ1 483 aa17.82■□□□□ 0.44
CHMP3-203ENST00000409225 SAAL1Q96ER3 474 aa17.82■□□□□ 0.44
CHMP3-203ENST00000409225 BBC3Q96PG8 261 aaPredicted RBP17.82■□□□□ 0.44
CHMP3-203ENST00000409225 SYT15Q9BQS2 421 aa17.82■□□□□ 0.44
CHMP3-203ENST00000409225 GDAP2Q9NXN4 497 aa17.82■□□□□ 0.44
CHMP3-203ENST00000409225 ITGA11Q9UKX5 1188 aa17.82■□□□□ 0.44
CHMP3-203ENST00000409225 CYP8B1Q9UNU6 501 aa17.82■□□□□ 0.44
CHMP3-203ENST00000409225 RAXQ9Y2V3 346 aa17.82■□□□□ 0.44
CHMP3-203ENST00000409225 MYOFQ9NZM1 2061 aa17.82■□□□□ 0.44
CHMP3-203ENST00000409225 IGHV1OR15-9A0A0B4J2B8 117 aa17.81■□□□□ 0.44
CHMP3-203ENST00000409225 LMO2P25791 158 aa17.81■□□□□ 0.44
CHMP3-203ENST00000409225 CYP27A1Q02318 531 aa17.81■□□□□ 0.44
CHMP3-203ENST00000409225 SOWAHAQ2M3V2 549 aa17.81■□□□□ 0.44
CHMP3-203ENST00000409225 PLEKHG6Q3KR16 790 aa17.81■□□□□ 0.44
CHMP3-203ENST00000409225 LY6G5CQ5SRR4 150 aa17.81■□□□□ 0.44
CHMP3-203ENST00000409225 VSTM1Q6UX27 236 aa17.81■□□□□ 0.44
CHMP3-203ENST00000409225 TRMT11Q7Z4G4 463 aaKnown RBP17.81■□□□□ 0.44
CHMP3-203ENST00000409225 NAXDQ8IW45 347 aa17.81■□□□□ 0.44
CHMP3-203ENST00000409225 BRSK2Q8IWQ3 736 aa17.81■□□□□ 0.44
CHMP3-203ENST00000409225 PHTF2Q8N3S3 785 aa17.81■□□□□ 0.44
CHMP3-203ENST00000409225 KIAA1958Q8N8K9 716 aa17.81■□□□□ 0.44
CHMP3-203ENST00000409225 TRIML1Q8N9V2 468 aa17.81■□□□□ 0.44
CHMP3-203ENST00000409225 CXorf38Q8TB03 319 aa17.81■□□□□ 0.44
CHMP3-203ENST00000409225 RAD54LQ92698 747 aa17.81■□□□□ 0.44
CHMP3-203ENST00000409225 LRIG1Q96JA1 1093 aa17.81■□□□□ 0.44
CHMP3-203ENST00000409225 HSPA12BQ96MM6 686 aa17.81■□□□□ 0.44
CHMP3-203ENST00000409225 CRTAC1Q9NQ79 661 aa17.81■□□□□ 0.44
CHMP3-203ENST00000409225 SETXQ7Z333 2677 aaKnown RBP17.81■□□□□ 0.44
CHMP3-203ENST00000409225 GJB3O75712 270 aa17.8■□□□□ 0.44
CHMP3-203ENST00000409225 OLFM2O95897 454 aa17.8■□□□□ 0.44
CHMP3-203ENST00000409225 MBL2P11226 248 aaPredicted RBP17.8■□□□□ 0.44
CHMP3-203ENST00000409225 HOXB2P14652 356 aa17.8■□□□□ 0.44
CHMP3-203ENST00000409225 UBA7P41226 1012 aa17.8■□□□□ 0.44
CHMP3-203ENST00000409225 RBP5P82980 135 aa17.8■□□□□ 0.44
CHMP3-203ENST00000409225 SLC14A1Q13336 389 aa17.8■□□□□ 0.44
CHMP3-203ENST00000409225 C10orf76Q5T2E6 689 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms