RNA–Protein interactions for RNA: ENST00000409033.7

ATG9A-203, Transcript of autophagy related 9A, humanhuman

TSL 1 (best)

Gene ATG9A, Length 3,701 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-203ENST00000409033 AVILO75366 819 aa13.09□□□□□ -0.31
ATG9A-203ENST00000409033 HMGCRP04035 888 aa13.09□□□□□ -0.31
ATG9A-203ENST00000409033 WSCD1Q658N2 575 aa13.09□□□□□ -0.31
ATG9A-203ENST00000409033 IQSEC1Q6DN90 963 aa13.09□□□□□ -0.31
ATG9A-203ENST00000409033 UNC45BQ8IWX7 931 aa13.09□□□□□ -0.31
ATG9A-203ENST00000409033 CCDC197Q8NCU1 140 aa13.09□□□□□ -0.31
ATG9A-203ENST00000409033 TTC17Q96AE7 1141 aa13.09□□□□□ -0.31
ATG9A-203ENST00000409033 MAGEB5Q9BZ81 275 aa13.09□□□□□ -0.31
ATG9A-203ENST00000409033 TXNDC16Q9P2K2 825 aa13.09□□□□□ -0.31
ATG9A-203ENST00000409033 WDR35Q9P2L0 1181 aa13.09□□□□□ -0.31
ATG9A-203ENST00000409033 ITGA11Q9UKX5 1188 aa13.09□□□□□ -0.31
ATG9A-203ENST00000409033 UBQLN1Q9UMX0 589 aaKnown RBP13.09□□□□□ -0.31
ATG9A-203ENST00000409033 hCG_1818297A0A087WSY0 165 aa13.09□□□□□ -0.31
ATG9A-203ENST00000409033 MEIS3P2A8K0S8 358 aa13.09□□□□□ -0.31
ATG9A-203ENST00000409033 CPP00450 1065 aa13.09□□□□□ -0.31
ATG9A-203ENST00000409033 KDELR1P24390 212 aa13.09□□□□□ -0.31
ATG9A-203ENST00000409033 CPT1AP50416 773 aa13.09□□□□□ -0.31
ATG9A-203ENST00000409033 TAP1Q03518 808 aa13.09□□□□□ -0.31
ATG9A-203ENST00000409033 TFDP2Q14188 446 aa13.09□□□□□ -0.31
ATG9A-203ENST00000409033 XYLT1Q86Y38 959 aa13.09□□□□□ -0.31
ATG9A-203ENST00000409033 HACE1Q8IYU2 909 aa13.09□□□□□ -0.31
ATG9A-203ENST00000409033 SHCBP1Q8NEM2 672 aa13.09□□□□□ -0.31
ATG9A-203ENST00000409033 SLC7A14Q8TBB6 771 aa13.09□□□□□ -0.31
ATG9A-203ENST00000409033 ZNF560Q96MR9 790 aa13.09□□□□□ -0.31
ATG9A-203ENST00000409033 IGF2BP3O00425 579 aaKnown RBP eCLIP13.09□□□□□ -0.317e-7■□□□□ 9
ATG9A-203ENST00000409033 APOL1O14791 398 aa13.09□□□□□ -0.31
ATG9A-203ENST00000409033 PMM2O15305 246 aa13.09□□□□□ -0.31
ATG9A-203ENST00000409033 SRGAP2BP0DMP2 458 aa13.09□□□□□ -0.31
ATG9A-203ENST00000409033 SCNN1GP51170 649 aa13.09□□□□□ -0.31
ATG9A-203ENST00000409033 SNX16P57768 344 aa13.09□□□□□ -0.31
ATG9A-203ENST00000409033 EFTUD2Q15029 972 aaKnown RBP eCLIP13.09□□□□□ -0.316e-7■■■□□ 16.7
ATG9A-203ENST00000409033 QPCTQ16769 361 aa13.09□□□□□ -0.31
ATG9A-203ENST00000409033 LDLRAD1Q5T700 205 aa13.09□□□□□ -0.31
ATG9A-203ENST00000409033 CHADLQ6NUI6 762 aa13.09□□□□□ -0.31
ATG9A-203ENST00000409033 TMEM40Q8WWA1 233 aa13.09□□□□□ -0.31
ATG9A-203ENST00000409033 L3MBTL3Q96JM7 780 aaPredicted RBP13.09□□□□□ -0.31
ATG9A-203ENST00000409033 TGS1Q96RS0 853 aaKnown RBP13.09□□□□□ -0.31
ATG9A-203ENST00000409033 SLC13A1Q9BZW2 595 aa13.09□□□□□ -0.31
ATG9A-203ENST00000409033 C12orf65Q9H3J6 166 aaKnown RBP13.09□□□□□ -0.31
ATG9A-203ENST00000409033 WHRNQ9P202 907 aa13.09□□□□□ -0.31
ATG9A-203ENST00000409033 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.09□□□□□ -0.31
ATG9A-203ENST00000409033 CCDC195A0A1B0GUA6 201 aa13.08□□□□□ -0.32
ATG9A-203ENST00000409033 SIGLEC16A6NMB1 481 aa13.08□□□□□ -0.32
ATG9A-203ENST00000409033 PHBP35232 272 aa13.08□□□□□ -0.32
ATG9A-203ENST00000409033 SNX17Q15036 470 aa13.08□□□□□ -0.32
ATG9A-203ENST00000409033 TRMT10CQ7L0Y3 403 aaKnown RBP13.08□□□□□ -0.32
ATG9A-203ENST00000409033 FBXO36Q8NEA4 188 aa13.08□□□□□ -0.32
ATG9A-203ENST00000409033 USP33Q8TEY7 942 aa13.08□□□□□ -0.32
ATG9A-203ENST00000409033 LBHD1Q9BQE6 289 aaPredicted RBP13.08□□□□□ -0.32
ATG9A-203ENST00000409033 CNPY3Q9BT09 278 aa13.08□□□□□ -0.32
ATG9A-203ENST00000409033 ZNF518BQ9C0D4 1074 aa13.08□□□□□ -0.32
ATG9A-203ENST00000409033 CNOT10Q9H9A5 744 aaKnown RBP13.08□□□□□ -0.32
ATG9A-203ENST00000409033 ZFYVE28Q9HCC9 887 aa13.08□□□□□ -0.32
ATG9A-203ENST00000409033 DCTN4Q9UJW0 460 aa13.08□□□□□ -0.32
ATG9A-203ENST00000409033 NAALADL1Q9UQQ1 740 aa13.08□□□□□ -0.32
ATG9A-203ENST00000409033 M0QYT0 321 aa13.08□□□□□ -0.32
ATG9A-203ENST00000409033 GNAT1P11488 350 aa13.08□□□□□ -0.32
ATG9A-203ENST00000409033 RGS2P41220 211 aa13.08□□□□□ -0.32
ATG9A-203ENST00000409033 POU5F1Q01860 360 aaKnown RBP13.08□□□□□ -0.32
ATG9A-203ENST00000409033 ZNF252P-AS1Q0IIN9 211 aa13.08□□□□□ -0.32
ATG9A-203ENST00000409033 AUHQ13825 339 aaKnown RBP13.08□□□□□ -0.32
ATG9A-203ENST00000409033 DCAF4L1Q3SXM0 396 aa13.08□□□□□ -0.32
ATG9A-203ENST00000409033 AGBL2Q5U5Z8 902 aa13.08□□□□□ -0.32
ATG9A-203ENST00000409033 GTF3C2Q8WUA4 911 aaPredicted RBP13.08□□□□□ -0.32
ATG9A-203ENST00000409033 ART4Q93070 314 aa13.08□□□□□ -0.32
ATG9A-203ENST00000409033 DOCK1Q14185 1865 aa13.08□□□□□ -0.32
ATG9A-203ENST00000409033 A0A087WUV0 522 aaPredicted RBP13.08□□□□□ -0.32
ATG9A-203ENST00000409033 SMIM28A0A1B0GU29 152 aa13.08□□□□□ -0.32
ATG9A-203ENST00000409033 MTA2O94776 668 aa13.08□□□□□ -0.32
ATG9A-203ENST00000409033 AMPD1P23109 780 aa13.08□□□□□ -0.32
ATG9A-203ENST00000409033 HADHBP55084 474 aaKnown RBP13.08□□□□□ -0.32
ATG9A-203ENST00000409033 PTK6Q13882 451 aa13.08□□□□□ -0.32
ATG9A-203ENST00000409033 ANKRD22Q5VYY1 191 aa13.08□□□□□ -0.32
ATG9A-203ENST00000409033 VSIG1Q86XK7 387 aa13.08□□□□□ -0.32
ATG9A-203ENST00000409033 DNAAF3Q8N9W5 541 aa13.08□□□□□ -0.32
ATG9A-203ENST00000409033 FERMT1Q9BQL6 677 aa13.08□□□□□ -0.32
ATG9A-203ENST00000409033 TRABDQ9H4I3 376 aa13.08□□□□□ -0.32
ATG9A-203ENST00000409033 KRT82Q9NSB4 513 aa13.08□□□□□ -0.32
ATG9A-203ENST00000409033 DOCK3Q8IZD9 2030 aa13.07□□□□□ -0.32
ATG9A-203ENST00000409033 AGTP01019 485 aa13.07□□□□□ -0.32
ATG9A-203ENST00000409033 CRADDP78560 199 aa13.07□□□□□ -0.32
ATG9A-203ENST00000409033 DNAJC3Q13217 504 aa13.07□□□□□ -0.32
ATG9A-203ENST00000409033 HEATR6Q6AI08 1181 aaKnown RBP13.07□□□□□ -0.32
ATG9A-203ENST00000409033 TTC13Q8NBP0 860 aa13.07□□□□□ -0.32
ATG9A-203ENST00000409033 APOL2Q9BQE5 337 aa13.07□□□□□ -0.32
ATG9A-203ENST00000409033 TMPRSS4Q9NRS4 437 aa13.07□□□□□ -0.32
ATG9A-203ENST00000409033 CDY2AQ9Y6F7 541 aa13.07□□□□□ -0.32
ATG9A-203ENST00000409033 NRCAMQ92823 1304 aa13.07□□□□□ -0.32
ATG9A-203ENST00000409033 A6NNZ2 444 aa13.07□□□□□ -0.32
ATG9A-203ENST00000409033 CDH16O75309 829 aa13.07□□□□□ -0.32
ATG9A-203ENST00000409033 NCAM1P13591 858 aa13.07□□□□□ -0.32
ATG9A-203ENST00000409033 DARSP14868 501 aaKnown RBP13.07□□□□□ -0.32
ATG9A-203ENST00000409033 TFE3P19532 575 aaPredicted RBP13.07□□□□□ -0.32
ATG9A-203ENST00000409033 RBL1P28749 1068 aa13.07□□□□□ -0.32
ATG9A-203ENST00000409033 CNGA2Q16280 664 aa13.07□□□□□ -0.32
ATG9A-203ENST00000409033 TUBB8Q3ZCM7 444 aa13.07□□□□□ -0.32
ATG9A-203ENST00000409033 STKLD1Q8NE28 680 aa13.07□□□□□ -0.32
ATG9A-203ENST00000409033 LRRC8CQ8TDW0 803 aa13.07□□□□□ -0.32
ATG9A-203ENST00000409033 SEC16BQ96JE7 1060 aa13.07□□□□□ -0.32
ATG9A-203ENST00000409033 MS4A4AQ96JQ5 239 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms