RNA–Protein interactions for RNA: ENST00000406881.3

PCDH11X-207, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,156 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-207ENST00000406881 RECQL4O94761 1208 aa4.93□□□□□ -1.62
PCDH11X-207ENST00000406881 HAUS5O94927 633 aa4.93□□□□□ -1.62
PCDH11X-207ENST00000406881 TTC4O95801 387 aa4.93□□□□□ -1.62
PCDH11X-207ENST00000406881 ACO1P21399 889 aaKnown RBP4.93□□□□□ -1.62
PCDH11X-207ENST00000406881 CNTFP26441 200 aa4.93□□□□□ -1.62
PCDH11X-207ENST00000406881 NNMTP40261 264 aa4.93□□□□□ -1.62
PCDH11X-207ENST00000406881 GEMP55040 296 aa4.93□□□□□ -1.62
PCDH11X-207ENST00000406881 HADHBP55084 474 aaKnown RBP4.93□□□□□ -1.62
PCDH11X-207ENST00000406881 DGKZQ13574 1117 aa4.93□□□□□ -1.62
PCDH11X-207ENST00000406881 LONRF1Q17RB8 773 aa4.93□□□□□ -1.62
PCDH11X-207ENST00000406881 FAM133BQ5BKY9 247 aaKnown RBP4.93□□□□□ -1.62
PCDH11X-207ENST00000406881 ERMARDQ5T6L9 678 aa4.93□□□□□ -1.62
PCDH11X-207ENST00000406881 TTC39BQ5VTQ0 682 aaPredicted RBP4.93□□□□□ -1.62
PCDH11X-207ENST00000406881 RNF219Q5W0B1 726 aaPredicted RBP4.93□□□□□ -1.62
PCDH11X-207ENST00000406881 ZNF280DQ6N043 979 aa4.93□□□□□ -1.62
PCDH11X-207ENST00000406881 FAM47EQ6ZV65 393 aa4.93□□□□□ -1.62
PCDH11X-207ENST00000406881 ACAD11Q709F0 780 aa4.93□□□□□ -1.62
PCDH11X-207ENST00000406881 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.93□□□□□ -1.62
PCDH11X-207ENST00000406881 NLGN2Q8NFZ4 835 aa4.93□□□□□ -1.62
PCDH11X-207ENST00000406881 RIN2Q8WYP3 895 aaPredicted RBP4.93□□□□□ -1.62
PCDH11X-207ENST00000406881 SHISA4Q96DD7 197 aa4.93□□□□□ -1.62
PCDH11X-207ENST00000406881 ELOVL4Q9GZR5 314 aa4.93□□□□□ -1.62
PCDH11X-207ENST00000406881 WWP1Q9H0M0 922 aa4.93□□□□□ -1.62
PCDH11X-207ENST00000406881 Q9H521 79 aa4.93□□□□□ -1.62
PCDH11X-207ENST00000406881 KIF9Q9HAQ2 790 aa4.93□□□□□ -1.62
PCDH11X-207ENST00000406881 STARD7Q9NQZ5 370 aa4.93□□□□□ -1.62
PCDH11X-207ENST00000406881 CHST12Q9NRB3 414 aa4.93□□□□□ -1.62
PCDH11X-207ENST00000406881 AAASQ9NRG9 546 aa4.93□□□□□ -1.62
PCDH11X-207ENST00000406881 CHMP2BQ9UQN3 213 aa4.93□□□□□ -1.62
PCDH11X-207ENST00000406881 ZNF536O15090 1300 aa4.93□□□□□ -1.62
PCDH11X-207ENST00000406881 ITGB4P16144 1822 aa4.93□□□□□ -1.62
PCDH11X-207ENST00000406881 BTBD19C9JJ37 291 aa4.93□□□□□ -1.62
PCDH11X-207ENST00000406881 ADAMTS3O15072 1205 aa4.93□□□□□ -1.62
PCDH11X-207ENST00000406881 MEFVO15553 781 aaPredicted RBP4.93□□□□□ -1.62
PCDH11X-207ENST00000406881 DHX15O43143 795 aaKnown RBP4.93□□□□□ -1.62
PCDH11X-207ENST00000406881 C4BPAP04003 597 aaKnown RBP4.93□□□□□ -1.62
PCDH11X-207ENST00000406881 CYBBP04839 570 aa4.93□□□□□ -1.62
PCDH11X-207ENST00000406881 TSHRP16473 764 aa4.93□□□□□ -1.62
PCDH11X-207ENST00000406881 DNAJB2P25686 324 aa4.93□□□□□ -1.62
PCDH11X-207ENST00000406881 EPHB2P29323 1055 aa4.93□□□□□ -1.62
PCDH11X-207ENST00000406881 RPL9P32969 192 aaKnown RBP4.93□□□□□ -1.62
PCDH11X-207ENST00000406881 CYP2C18P33260 490 aa4.93□□□□□ -1.62
PCDH11X-207ENST00000406881 YWHAZP63104 245 aaKnown RBP4.93□□□□□ -1.62
PCDH11X-207ENST00000406881 MRPS6P82932 125 aaKnown RBP4.93□□□□□ -1.62
PCDH11X-207ENST00000406881 PTK7Q13308 1070 aa4.93□□□□□ -1.62
PCDH11X-207ENST00000406881 MAMLD1Q13495 774 aa4.93□□□□□ -1.62
PCDH11X-207ENST00000406881 PTGISQ16647 500 aa4.93□□□□□ -1.62
PCDH11X-207ENST00000406881 HP1BP3Q5SSJ5 553 aaPredicted RBP4.93□□□□□ -1.62
PCDH11X-207ENST00000406881 SPRYD7Q5W111 196 aa4.93□□□□□ -1.62
PCDH11X-207ENST00000406881 HIBCHQ6NVY1 386 aaPredicted RBP4.93□□□□□ -1.62
PCDH11X-207ENST00000406881 PDCD7Q8N8D1 485 aaKnown RBP4.93□□□□□ -1.62
PCDH11X-207ENST00000406881 OR2W6PQ8NHA6 318 aa4.93□□□□□ -1.62
PCDH11X-207ENST00000406881 ATG4AQ8WYN0 398 aa4.93□□□□□ -1.62
PCDH11X-207ENST00000406881 MAML1Q92585 1016 aa4.93□□□□□ -1.62
PCDH11X-207ENST00000406881 ATP6V1E2Q96A05 226 aa4.93□□□□□ -1.62
PCDH11X-207ENST00000406881 CDK5RAP1Q96SZ6 601 aaKnown RBP4.93□□□□□ -1.62
PCDH11X-207ENST00000406881 MRPL9Q9BYD2 267 aaKnown RBP4.93□□□□□ -1.62
PCDH11X-207ENST00000406881 LRRC19Q9H756 370 aa4.93□□□□□ -1.62
PCDH11X-207ENST00000406881 MRPL40Q9NQ50 206 aaKnown RBP4.93□□□□□ -1.62
PCDH11X-207ENST00000406881 DDX43Q9NXZ2 648 aaKnown RBP4.93□□□□□ -1.62
PCDH11X-207ENST00000406881 EPS15L1Q9UBC2 864 aa4.93□□□□□ -1.62
PCDH11X-207ENST00000406881 PPARGC1AQ9UBK2 798 aaKnown RBP4.93□□□□□ -1.62
PCDH11X-207ENST00000406881 AAR2Q9Y312 384 aaKnown RBP4.93□□□□□ -1.62
PCDH11X-207ENST00000406881 USP15Q9Y4E8 981 aaPredicted RBP4.93□□□□□ -1.62
PCDH11X-207ENST00000406881 USH1CQ9Y6N9 552 aa4.93□□□□□ -1.62
PCDH11X-207ENST00000406881 CNTNAP2Q9UHC6 1331 aa4.93□□□□□ -1.62
PCDH11X-207ENST00000406881 TMEM120BA0PK00 339 aa4.93□□□□□ -1.62
PCDH11X-207ENST00000406881 APOC4-APOC2K7ER74 178 aa4.93□□□□□ -1.62
PCDH11X-207ENST00000406881 PDE2AO00408 941 aaPredicted RBP4.93□□□□□ -1.62
PCDH11X-207ENST00000406881 FSCN2O14926 492 aa4.93□□□□□ -1.62
PCDH11X-207ENST00000406881 SH3BP5O60239 455 aa4.93□□□□□ -1.62
PCDH11X-207ENST00000406881 LUC7L3O95232 432 aaKnown RBP4.93□□□□□ -1.62
PCDH11X-207ENST00000406881 APOC2P02655 101 aa4.93□□□□□ -1.62
PCDH11X-207ENST00000406881 TPD52P55327 224 aaPredicted RBP4.93□□□□□ -1.62
PCDH11X-207ENST00000406881 RCN2Q14257 317 aa4.93□□□□□ -1.62
PCDH11X-207ENST00000406881 TRADDQ15628 312 aa4.93□□□□□ -1.62
PCDH11X-207ENST00000406881 HSDL1Q3SXM5 330 aa4.93□□□□□ -1.62
PCDH11X-207ENST00000406881 MGAT5BQ3V5L5 792 aa4.93□□□□□ -1.62
PCDH11X-207ENST00000406881 EEF1DP3Q658K8 133 aa4.93□□□□□ -1.62
PCDH11X-207ENST00000406881 MFSD7Q6UXD7 560 aa4.93□□□□□ -1.62
PCDH11X-207ENST00000406881 MOB2Q70IA6 237 aa4.93□□□□□ -1.62
PCDH11X-207ENST00000406881 TMC3Q7Z5M5 1100 aa4.93□□□□□ -1.62
PCDH11X-207ENST00000406881 TBC1D1Q86TI0 1168 aaPredicted RBP4.93□□□□□ -1.62
PCDH11X-207ENST00000406881 LRRC6Q86X45 466 aa4.93□□□□□ -1.62
PCDH11X-207ENST00000406881 ZC3H3Q8IXZ2 948 aaKnown RBP4.93□□□□□ -1.62
PCDH11X-207ENST00000406881 RASGEF1CQ8N431 466 aa4.93□□□□□ -1.62
PCDH11X-207ENST00000406881 LZTR1Q8N653 840 aa4.93□□□□□ -1.62
PCDH11X-207ENST00000406881 EMC1Q8N766 993 aa4.93□□□□□ -1.62
PCDH11X-207ENST00000406881 OR5B17Q8NGF7 314 aa4.93□□□□□ -1.62
PCDH11X-207ENST00000406881 HELQQ8TDG4 1101 aa4.93□□□□□ -1.62
PCDH11X-207ENST00000406881 MICAL1Q8TDZ2 1067 aa4.93□□□□□ -1.62
PCDH11X-207ENST00000406881 BSNDQ8WZ55 320 aa4.93□□□□□ -1.62
PCDH11X-207ENST00000406881 C18orf25Q96B23 403 aaPredicted RBP4.93□□□□□ -1.62
PCDH11X-207ENST00000406881 SMARCD1Q96GM5 515 aa4.93□□□□□ -1.62
PCDH11X-207ENST00000406881 KREMEN1Q96MU8 473 aa4.93□□□□□ -1.62
PCDH11X-207ENST00000406881 CDC42EP4Q9H3Q1 356 aaKnown RBP4.93□□□□□ -1.62
PCDH11X-207ENST00000406881 FBXO44Q9H4M3 255 aa4.93□□□□□ -1.62
PCDH11X-207ENST00000406881 XPNPEP1Q9NQW7 623 aa4.93□□□□□ -1.62
PCDH11X-207ENST00000406881 KRT82Q9NSB4 513 aa4.93□□□□□ -1.62
PCDH11X-207ENST00000406881 ZFP69BQ9UJL9 534 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms