RNA–Protein interactions for RNA: ENST00000404008.6

USP42-202, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 1,380 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-202ENST00000404008 WDR6Q9NNW5 1121 aaKnown RBP30.98■■■□□ 2.55
USP42-202ENST00000404008 EHD2Q9NZN4 543 aa30.98■■■□□ 2.55
USP42-202ENST00000404008 MAGED2Q9UNF1 606 aaPredicted RBP30.98■■■□□ 2.55
USP42-202ENST00000404008 CLUHO75153 1309 aa30.97■■■□□ 2.55
USP42-202ENST00000404008 RTN3O95197 1032 aaPredicted RBP30.97■■■□□ 2.55
USP42-202ENST00000404008 MMEP08473 750 aa30.97■■■□□ 2.55
USP42-202ENST00000404008 TPM1P09493 284 aa30.97■■■□□ 2.55
USP42-202ENST00000404008 CBX2Q14781 532 aaPredicted RBP30.97■■■□□ 2.55
USP42-202ENST00000404008 PASD1Q8IV76 773 aa30.97■■■□□ 2.55
USP42-202ENST00000404008 LEMD2Q8NC56 503 aa30.97■■■□□ 2.55
USP42-202ENST00000404008 SCAMP5Q8TAC9 235 aa30.97■■■□□ 2.55
USP42-202ENST00000404008 IL37Q9NZH6 218 aa30.97■■■□□ 2.55
USP42-202ENST00000404008 CHRNB2P17787 502 aa30.96■■■□□ 2.55
USP42-202ENST00000404008 PRKCIP41743 596 aa30.96■■■□□ 2.55
USP42-202ENST00000404008 RAB41Q5JT25 222 aa30.96■■■□□ 2.55
USP42-202ENST00000404008 PDZD4Q76G19 769 aaPredicted RBP30.96■■■□□ 2.55
USP42-202ENST00000404008 POMKQ9H5K3 350 aa30.96■■■□□ 2.55
USP42-202ENST00000404008 COMMD8Q9NX08 183 aa30.96■■■□□ 2.55
USP42-202ENST00000404008 UXTQ9UBK9 157 aaPredicted RBP30.96■■■□□ 2.55
USP42-202ENST00000404008 CDC25BP30305 580 aa30.95■■■□□ 2.55
USP42-202ENST00000404008 FMO1Q01740 532 aa30.95■■■□□ 2.55
USP42-202ENST00000404008 SLC5A9Q2M3M2 681 aa30.95■■■□□ 2.55
USP42-202ENST00000404008 PUS10Q3MIT2 529 aaKnown RBP30.95■■■□□ 2.55
USP42-202ENST00000404008 PRSS36Q5K4E3 855 aa30.95■■■□□ 2.55
USP42-202ENST00000404008 CYP4A22Q5TCH4 519 aa30.95■■■□□ 2.55
USP42-202ENST00000404008 PTCRAQ6ISU1 281 aaPredicted RBP30.95■■■□□ 2.55
USP42-202ENST00000404008 PMF1Q6P1K2 205 aa30.95■■■□□ 2.55
USP42-202ENST00000404008 WDTC1Q8N5D0 677 aa30.95■■■□□ 2.55
USP42-202ENST00000404008 KCTD13Q8WZ19 329 aa30.95■■■□□ 2.55
USP42-202ENST00000404008 PDCL3Q9H2J4 239 aa30.95■■■□□ 2.55
USP42-202ENST00000404008 IL21Q9HBE4 155 aa30.95■■■□□ 2.55
USP42-202ENST00000404008 CYTH4Q9UIA0 394 aa30.95■■■□□ 2.55
USP42-202ENST00000404008 MFAP3LO75121 409 aa30.94■■■□□ 2.54
USP42-202ENST00000404008 MYL4P12829 197 aa30.94■■■□□ 2.54
USP42-202ENST00000404008 CCR2P41597 374 aa30.94■■■□□ 2.54
USP42-202ENST00000404008 KIF11P52732 1056 aa30.94■■■□□ 2.54
USP42-202ENST00000404008 IFRD2Q12894 506 aaPredicted RBP30.94■■■□□ 2.54
USP42-202ENST00000404008 ARID5BQ14865 1188 aa30.94■■■□□ 2.54
USP42-202ENST00000404008 DNAJC7Q99615 494 aa30.94■■■□□ 2.54
USP42-202ENST00000404008 ANAPC1Q9H1A4 1944 aa30.94■■■□□ 2.54
USP42-202ENST00000404008 FAM92AA1XBS5 289 aa30.93■■■□□ 2.54
USP42-202ENST00000404008 FGF19O95750 216 aa30.93■■■□□ 2.54
USP42-202ENST00000404008 YWHAQP27348 245 aa30.93■■■□□ 2.54
USP42-202ENST00000404008 CDH5P33151 784 aaPredicted RBP30.93■■■□□ 2.54
USP42-202ENST00000404008 SMAD2Q15796 467 aaKnown RBP30.93■■■□□ 2.54
USP42-202ENST00000404008 GAREM2Q75VX8 874 aa30.93■■■□□ 2.54
USP42-202ENST00000404008 STK32AQ8WU08 396 aa30.93■■■□□ 2.54
USP42-202ENST00000404008 AGPAT1Q99943 283 aa30.93■■■□□ 2.54
USP42-202ENST00000404008 SYT11Q9BT88 431 aa30.93■■■□□ 2.54
USP42-202ENST00000404008 FBXO44Q9H4M3 255 aa30.93■■■□□ 2.54
USP42-202ENST00000404008 CEP83Q9Y592 693 aa30.93■■■□□ 2.54
USP42-202ENST00000404008 NRG2O14511 850 aaPredicted RBP30.92■■■□□ 2.54
USP42-202ENST00000404008 LSM8O95777 96 aaKnown RBP30.92■■■□□ 2.54
USP42-202ENST00000404008 FSHRP23945 695 aa30.92■■■□□ 2.54
USP42-202ENST00000404008 GABRR2P28476 465 aa30.92■■■□□ 2.54
USP42-202ENST00000404008 HNRNPH3P31942 346 aaKnown RBP30.92■■■□□ 2.54
USP42-202ENST00000404008 RPL34P49207 117 aaKnown RBP30.92■■■□□ 2.54
USP42-202ENST00000404008 RGS7P49802 495 aa30.92■■■□□ 2.54
USP42-202ENST00000404008 AAK1Q2M2I8 961 aa30.92■■■□□ 2.54
USP42-202ENST00000404008 HGSNATQ68CP4 663 aa30.92■■■□□ 2.54
USP42-202ENST00000404008 TMEM150AQ86TG1 271 aa30.92■■■□□ 2.54
USP42-202ENST00000404008 C1orf131Q8NDD1 294 aaKnown RBP30.92■■■□□ 2.54
USP42-202ENST00000404008 TCEAL4Q96EI5 215 aa30.92■■■□□ 2.54
USP42-202ENST00000404008 HSFY1Q96LI6 401 aa30.92■■■□□ 2.54
USP42-202ENST00000404008 HAUS4Q9H6D7 363 aa30.92■■■□□ 2.54
USP42-202ENST00000404008 USP3Q9Y6I4 520 aa30.92■■■□□ 2.54
USP42-202ENST00000404008 ZNF197O14709 1029 aa30.92■■■□□ 2.54
USP42-202ENST00000404008 MOSPD3O75425 235 aa30.92■■■□□ 2.54
USP42-202ENST00000404008 GABBR2O75899 941 aa30.92■■■□□ 2.54
USP42-202ENST00000404008 F11P03951 625 aa30.92■■■□□ 2.54
USP42-202ENST00000404008 TKTL1P51854 596 aa30.92■■■□□ 2.54
USP42-202ENST00000404008 ADKP55263 362 aaKnown RBP30.92■■■□□ 2.54
USP42-202ENST00000404008 GOLGA8FQ08AF8 430 aa30.92■■■□□ 2.54
USP42-202ENST00000404008 GOLGA8DPQ0D2H9 430 aa30.92■■■□□ 2.54
USP42-202ENST00000404008 KLHL30Q0D2K2 578 aa30.92■■■□□ 2.54
USP42-202ENST00000404008 PDCLQ13371 301 aa30.92■■■□□ 2.54
USP42-202ENST00000404008 CNGA4Q8IV77 575 aa30.92■■■□□ 2.54
USP42-202ENST00000404008 TMEM35BQ8NCS4 154 aa30.92■■■□□ 2.54
USP42-202ENST00000404008 OR8K1Q8NGG5 319 aa30.92■■■□□ 2.54
USP42-202ENST00000404008 ITFG1Q8TB96 612 aa30.92■■■□□ 2.54
USP42-202ENST00000404008 SHKBP1Q8TBC3 707 aa30.92■■■□□ 2.54
USP42-202ENST00000404008 SLC4A5Q9BY07 1137 aa30.92■■■□□ 2.54
USP42-202ENST00000404008 LRRC4Q9HBW1 653 aa30.92■■■□□ 2.54
USP42-202ENST00000404008 ABHD10Q9NUJ1 306 aa30.92■■■□□ 2.54
USP42-202ENST00000404008 FAM50BQ9Y247 325 aa30.92■■■□□ 2.54
USP42-202ENST00000404008 MRPS23Q9Y3D9 190 aaKnown RBP30.92■■■□□ 2.54
USP42-202ENST00000404008 A0A1W2PRU2 124 aa30.91■■■□□ 2.54
USP42-202ENST00000404008 AKR1B15C9JRZ8 316 aaPredicted RBP30.91■■■□□ 2.54
USP42-202ENST00000404008 TADA3O75528 432 aa30.91■■■□□ 2.54
USP42-202ENST00000404008 SKILP12757 684 aa30.91■■■□□ 2.54
USP42-202ENST00000404008 CDC25CP30307 473 aa30.91■■■□□ 2.54
USP42-202ENST00000404008 ADIGQ0VDE8 80 aa30.91■■■□□ 2.54
USP42-202ENST00000404008 TAF10Q12962 218 aa30.91■■■□□ 2.54
USP42-202ENST00000404008 TRIM72Q6ZMU5 477 aa30.91■■■□□ 2.54
USP42-202ENST00000404008 ARHGAP30Q7Z6I6 1101 aaPredicted RBP30.91■■■□□ 2.54
USP42-202ENST00000404008 OLIG1Q8TAK6 271 aa30.91■■■□□ 2.54
USP42-202ENST00000404008 FBXO32Q969P5 355 aa30.91■■■□□ 2.54
USP42-202ENST00000404008 SLITRK1Q96PX8 696 aa30.91■■■□□ 2.54
USP42-202ENST00000404008 CYLDQ9NQC7 956 aa30.91■■■□□ 2.54
USP42-202ENST00000404008 SCML2Q9UQR0 700 aa30.91■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms