RNA–Protein interactions for RNA: ENST00000400053.8

PTPRM-202, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRM, Length 5,292 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-202ENST00000400053 HIST2H2AA3Q6FI13 130 aa9.19□□□□□ -0.94
PTPRM-202ENST00000400053 NAALADL1Q9UQQ1 740 aa9.19□□□□□ -0.94
PTPRM-202ENST00000400053 SNX13Q9Y5W8 968 aa9.19□□□□□ -0.94
PTPRM-202ENST00000400053 SPACA6W5XKT8 324 aa9.19□□□□□ -0.94
PTPRM-202ENST00000400053 DGAT1O75907 488 aa9.18□□□□□ -0.94
PTPRM-202ENST00000400053 SERPINB5P36952 375 aa9.18□□□□□ -0.94
PTPRM-202ENST00000400053 RFC5P40937 340 aa9.18□□□□□ -0.94
PTPRM-202ENST00000400053 KBTBD12Q3ZCT8 623 aa9.18□□□□□ -0.94
PTPRM-202ENST00000400053 FAM45BPQ6NSW5 357 aa9.18□□□□□ -0.94
PTPRM-202ENST00000400053 CCDC81Q6ZN84 652 aa9.18□□□□□ -0.94
PTPRM-202ENST00000400053 C3orf67Q6ZVT6 689 aa9.18□□□□□ -0.94
PTPRM-202ENST00000400053 GPR141Q7Z602 305 aa9.18□□□□□ -0.94
PTPRM-202ENST00000400053 SHCBP1Q8NEM2 672 aa9.18□□□□□ -0.94
PTPRM-202ENST00000400053 PTPRN2Q92932 1015 aa9.18□□□□□ -0.94
PTPRM-202ENST00000400053 KLHL25Q9H0H3 589 aa9.18□□□□□ -0.94
PTPRM-202ENST00000400053 ACAD9Q9H845 621 aa9.18□□□□□ -0.94
PTPRM-202ENST00000400053 CACNA2D2Q9NY47 1150 aa9.18□□□□□ -0.94
PTPRM-202ENST00000400053 SLC39A10Q9ULF5 831 aa9.18□□□□□ -0.94
PTPRM-202ENST00000400053 ABT1Q9ULW3 272 aaKnown RBP9.18□□□□□ -0.94
PTPRM-202ENST00000400053 KANSL1LA0AUZ9 987 aa9.18□□□□□ -0.94
PTPRM-202ENST00000400053 MYO1GB0I1T2 1018 aa9.18□□□□□ -0.94
PTPRM-202ENST00000400053 DFFAO00273 331 aa9.18□□□□□ -0.94
PTPRM-202ENST00000400053 NBNO60934 754 aa9.18□□□□□ -0.94
PTPRM-202ENST00000400053 CBX6O95503 412 aa9.18□□□□□ -0.94
PTPRM-202ENST00000400053 PSMC3P17980 439 aa9.18□□□□□ -0.94
PTPRM-202ENST00000400053 TFE3P19532 575 aaPredicted RBP9.18□□□□□ -0.94
PTPRM-202ENST00000400053 CALB2P22676 271 aa9.18□□□□□ -0.94
PTPRM-202ENST00000400053 NPEPPSP55786 919 aa9.18□□□□□ -0.94
PTPRM-202ENST00000400053 TPI1P60174 286 aa9.18□□□□□ -0.94
PTPRM-202ENST00000400053 GJC2Q5T442 439 aaPredicted RBP9.18□□□□□ -0.94
PTPRM-202ENST00000400053 MFSD14CQ5VZR4 134 aa9.18□□□□□ -0.94
PTPRM-202ENST00000400053 IL31Q6EBC2 164 aa9.18□□□□□ -0.94
PTPRM-202ENST00000400053 ISLR2Q6UXK2 745 aa9.18□□□□□ -0.94
PTPRM-202ENST00000400053 LRP10Q7Z4F1 713 aa9.18□□□□□ -0.94
PTPRM-202ENST00000400053 ADCK2Q7Z695 626 aa9.18□□□□□ -0.94
PTPRM-202ENST00000400053 FEZF2Q8TBJ5 459 aa9.18□□□□□ -0.94
PTPRM-202ENST00000400053 TMEM143Q96AN5 459 aa9.18□□□□□ -0.94
PTPRM-202ENST00000400053 DEPDC7Q96QD5 511 aa9.18□□□□□ -0.94
PTPRM-202ENST00000400053 TMEM120AQ9BXJ8 343 aa9.18□□□□□ -0.94
PTPRM-202ENST00000400053 PLEKHA5Q9HAU0 1116 aa9.18□□□□□ -0.94
PTPRM-202ENST00000400053 LATS2Q9NRM7 1088 aa9.18□□□□□ -0.94
PTPRM-202ENST00000400053 ARHGEF38Q9NXL2 777 aa9.18□□□□□ -0.94
PTPRM-202ENST00000400053 POLLQ9UGP5 575 aa9.18□□□□□ -0.94
PTPRM-202ENST00000400053 RIC1Q4ADV7 1423 aa9.18□□□□□ -0.94
PTPRM-202ENST00000400053 ZC3H4Q9UPT8 1303 aaKnown RBP9.18□□□□□ -0.94
PTPRM-202ENST00000400053 TMEM191CA6NGB0 347 aa9.18□□□□□ -0.94
PTPRM-202ENST00000400053 POLRMTO00411 1230 aaKnown RBP9.18□□□□□ -0.94
PTPRM-202ENST00000400053 MSH4O15457 936 aa9.18□□□□□ -0.94
PTPRM-202ENST00000400053 SNRPFP62306 86 aaKnown RBP9.18□□□□□ -0.94
PTPRM-202ENST00000400053 ARHGEF7Q14155 803 aa9.18□□□□□ -0.94
PTPRM-202ENST00000400053 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.18□□□□□ -0.94
PTPRM-202ENST00000400053 RNF149Q8NC42 400 aa9.18□□□□□ -0.94
PTPRM-202ENST00000400053 FBXO36Q8NEA4 188 aa9.18□□□□□ -0.94
PTPRM-202ENST00000400053 ZNF669Q96BR6 464 aaPredicted RBP9.18□□□□□ -0.94
PTPRM-202ENST00000400053 MIEF2Q96C03 454 aa9.18□□□□□ -0.94
PTPRM-202ENST00000400053 WNK4Q96J92 1243 aa9.18□□□□□ -0.94
PTPRM-202ENST00000400053 MXRA8Q9BRK3 442 aa9.18□□□□□ -0.94
PTPRM-202ENST00000400053 VPS33BQ9H267 617 aa9.18□□□□□ -0.94
PTPRM-202ENST00000400053 RPRD1BQ9NQG5 326 aaKnown RBP9.18□□□□□ -0.94
PTPRM-202ENST00000400053 IMPAD1Q9NX62 359 aa9.18□□□□□ -0.94
PTPRM-202ENST00000400053 LRCH1Q9Y2L9 728 aa9.18□□□□□ -0.94
PTPRM-202ENST00000400053 AP4S1Q9Y587 144 aa9.18□□□□□ -0.94
PTPRM-202ENST00000400053 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.18□□□□□ -0.94
PTPRM-202ENST00000400053 SPATA31A6Q5VVP1 1343 aa9.18□□□□□ -0.94
PTPRM-202ENST00000400053 PDE2AO00408 941 aaPredicted RBP9.18□□□□□ -0.94
PTPRM-202ENST00000400053 MED24O75448 989 aa9.18□□□□□ -0.94
PTPRM-202ENST00000400053 AP1G2O75843 785 aa9.18□□□□□ -0.94
PTPRM-202ENST00000400053 SGPL1O95470 568 aa9.18□□□□□ -0.94
PTPRM-202ENST00000400053 ALBP02768 609 aa9.18□□□□□ -0.94
PTPRM-202ENST00000400053 ELF3P78545 371 aaPredicted RBP9.18□□□□□ -0.94
PTPRM-202ENST00000400053 PHKG1Q16816 387 aa9.18□□□□□ -0.94
PTPRM-202ENST00000400053 C11orf88Q6PI97 169 aa9.18□□□□□ -0.94
PTPRM-202ENST00000400053 TMC3Q7Z5M5 1100 aa9.18□□□□□ -0.94
PTPRM-202ENST00000400053 FGD2Q7Z6J4 655 aa9.18□□□□□ -0.94
PTPRM-202ENST00000400053 ZNF467Q7Z7K2 595 aaPredicted RBP9.18□□□□□ -0.94
PTPRM-202ENST00000400053 CREG2Q8IUH2 290 aa9.18□□□□□ -0.94
PTPRM-202ENST00000400053 SLC4A9Q96Q91 983 aa9.18□□□□□ -0.94
PTPRM-202ENST00000400053 ADAM30Q9UKF2 790 aa9.18□□□□□ -0.94
PTPRM-202ENST00000400053 PKP3Q9Y446 797 aa9.18□□□□□ -0.94
PTPRM-202ENST00000400053 ALDH1A2O94788 518 aa9.18□□□□□ -0.94
PTPRM-202ENST00000400053 CSPG5O95196 566 aa9.18□□□□□ -0.94
PTPRM-202ENST00000400053 IL1R1P14778 569 aa9.18□□□□□ -0.94
PTPRM-202ENST00000400053 BGNP21810 368 aa9.18□□□□□ -0.94
PTPRM-202ENST00000400053 BMP6P22004 513 aa9.18□□□□□ -0.94
PTPRM-202ENST00000400053 AKT1P31749 480 aa9.18□□□□□ -0.94
PTPRM-202ENST00000400053 SLC20A2Q08357 652 aa9.18□□□□□ -0.94
PTPRM-202ENST00000400053 PTK6Q13882 451 aa9.18□□□□□ -0.94
PTPRM-202ENST00000400053 TTMPQ5BVD1 217 aa9.18□□□□□ -0.94
PTPRM-202ENST00000400053 GPAT2Q6NUI2 795 aa9.18□□□□□ -0.94
PTPRM-202ENST00000400053 HEATR4Q86WZ0 1026 aa9.18□□□□□ -0.94
PTPRM-202ENST00000400053 TERB1Q8NA31 727 aa9.18□□□□□ -0.94
PTPRM-202ENST00000400053 USP13Q92995 863 aaPredicted RBP9.18□□□□□ -0.94
PTPRM-202ENST00000400053 ELMO2Q96JJ3 720 aa9.18□□□□□ -0.94
PTPRM-202ENST00000400053 MED15Q96RN5 788 aa9.18□□□□□ -0.94
PTPRM-202ENST00000400053 USE1Q9NZ43 259 aa9.18□□□□□ -0.94
PTPRM-202ENST00000400053 LINC00854A0A1B0GVQ3 168 aa9.17□□□□□ -0.94
PTPRM-202ENST00000400053 STRNO43815 780 aa9.17□□□□□ -0.94
PTPRM-202ENST00000400053 CHRNA5P30532 468 aa9.17□□□□□ -0.94
PTPRM-202ENST00000400053 TTLL9Q3SXZ7 439 aa9.17□□□□□ -0.94
PTPRM-202ENST00000400053 KCTD21Q4G0X4 260 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms