RNA–Protein interactions for RNA: ENST00000399292.7

SMIM11A-201, Transcript of small integral membrane protein 11A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM11A, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-201ENST00000399292 CSH2P0DML3 217 aa12.57□□□□□ -0.4
SMIM11A-201ENST00000399292 GDI1P31150 447 aa12.57□□□□□ -0.4
SMIM11A-201ENST00000399292 PNOCQ13519 176 aa12.57□□□□□ -0.4
SMIM11A-201ENST00000399292 NCOA4Q13772 614 aa12.57□□□□□ -0.4
SMIM11A-201ENST00000399292 GRM2Q14416 872 aa12.57□□□□□ -0.4
SMIM11A-201ENST00000399292 MAPRE1Q15691 268 aaKnown RBP12.57□□□□□ -0.4
SMIM11A-201ENST00000399292 MLF2Q15773 248 aaPredicted RBP12.57□□□□□ -0.4
SMIM11A-201ENST00000399292 NFIL3Q16649 462 aa12.57□□□□□ -0.4
SMIM11A-201ENST00000399292 DDR2Q16832 855 aa12.57□□□□□ -0.4
SMIM11A-201ENST00000399292 CFAP221Q4G0U5 840 aa12.57□□□□□ -0.4
SMIM11A-201ENST00000399292 TDRD10Q5VZ19 366 aaKnown RBP12.57□□□□□ -0.4
SMIM11A-201ENST00000399292 VITQ6UXI7 678 aa12.57□□□□□ -0.4
SMIM11A-201ENST00000399292 ARID3BQ8IVW6 561 aaPredicted RBP12.57□□□□□ -0.4
SMIM11A-201ENST00000399292 SCN4BQ8IWT1 228 aa12.57□□□□□ -0.4
SMIM11A-201ENST00000399292 ENGASEQ8NFI3 743 aa12.57□□□□□ -0.4
SMIM11A-201ENST00000399292 OR6B3Q8NGW1 331 aa12.57□□□□□ -0.4
SMIM11A-201ENST00000399292 ATOH1Q92858 354 aaPredicted RBP12.57□□□□□ -0.4
SMIM11A-201ENST00000399292 PKMYT1Q99640 499 aa12.57□□□□□ -0.4
SMIM11A-201ENST00000399292 SYT15Q9BQS2 421 aa12.57□□□□□ -0.4
SMIM11A-201ENST00000399292 MRPL45Q9BRJ2 306 aaKnown RBP12.57□□□□□ -0.4
SMIM11A-201ENST00000399292 TASP1Q9H6P5 420 aa12.57□□□□□ -0.4
SMIM11A-201ENST00000399292 RMND1Q9NWS8 449 aa12.57□□□□□ -0.4
SMIM11A-201ENST00000399292 HOOK1Q9UJC3 728 aaKnown RBP12.57□□□□□ -0.4
SMIM11A-201ENST00000399292 USP34Q70CQ2 3546 aa12.57□□□□□ -0.4
SMIM11A-201ENST00000399292 KANSL1LA0AUZ9 987 aa12.56□□□□□ -0.4
SMIM11A-201ENST00000399292 IKBKBO14920 756 aa12.56□□□□□ -0.4
SMIM11A-201ENST00000399292 ZNF263O14978 683 aa12.56□□□□□ -0.4
SMIM11A-201ENST00000399292 MAPK13O15264 365 aa12.56□□□□□ -0.4
SMIM11A-201ENST00000399292 HCRTO43612 131 aa12.56□□□□□ -0.4
SMIM11A-201ENST00000399292 CLSTN1O94985 981 aa12.56□□□□□ -0.4
SMIM11A-201ENST00000399292 SMC2O95347 1197 aa12.56□□□□□ -0.4
SMIM11A-201ENST00000399292 DCNP07585 359 aaKnown RBP12.56□□□□□ -0.4
SMIM11A-201ENST00000399292 HMGA1P17096 107 aaKnown RBP12.56□□□□□ -0.4
SMIM11A-201ENST00000399292 NR2F2P24468 414 aa12.56□□□□□ -0.4
SMIM11A-201ENST00000399292 WEE1P30291 646 aa12.56□□□□□ -0.4
SMIM11A-201ENST00000399292 MAGEA11P43364 429 aa12.56□□□□□ -0.4
SMIM11A-201ENST00000399292 GPR15P49685 360 aa12.56□□□□□ -0.4
SMIM11A-201ENST00000399292 PSMC1P62191 440 aaKnown RBP12.56□□□□□ -0.4
SMIM11A-201ENST00000399292 DLG4P78352 724 aa12.56□□□□□ -0.4
SMIM11A-201ENST00000399292 FAM160A1Q05DH4 1040 aa12.56□□□□□ -0.4
SMIM11A-201ENST00000399292 ADAM9Q13443 819 aa12.56□□□□□ -0.4
SMIM11A-201ENST00000399292 SGSM1Q2NKQ1 1148 aa12.56□□□□□ -0.4
SMIM11A-201ENST00000399292 STXBP5Q5T5C0 1151 aa12.56□□□□□ -0.4
SMIM11A-201ENST00000399292 SDHAF4Q5VUM1 108 aa12.56□□□□□ -0.4
SMIM11A-201ENST00000399292 YAF2Q8IY57 180 aa12.56□□□□□ -0.4
SMIM11A-201ENST00000399292 CCDC105Q8IYK2 499 aa12.56□□□□□ -0.4
SMIM11A-201ENST00000399292 DTWD2Q8NBA8 298 aa12.56□□□□□ -0.4
SMIM11A-201ENST00000399292 MYCBPAPQ8TBZ2 947 aa12.56□□□□□ -0.4
SMIM11A-201ENST00000399292 DNASE1L2Q92874 299 aa12.56□□□□□ -0.4
SMIM11A-201ENST00000399292 SCARF2Q96GP6 870 aaPredicted RBP12.56□□□□□ -0.4
SMIM11A-201ENST00000399292 TIGD1Q96MW7 591 aa12.56□□□□□ -0.4
SMIM11A-201ENST00000399292 GSDMAQ96QA5 445 aa12.56□□□□□ -0.4
SMIM11A-201ENST00000399292 NELL2Q99435 816 aa12.56□□□□□ -0.4
SMIM11A-201ENST00000399292 MKNK1Q9BUB5 465 aa12.56□□□□□ -0.4
SMIM11A-201ENST00000399292 DDX23Q9BUQ8 820 aaKnown RBP12.56□□□□□ -0.4
SMIM11A-201ENST00000399292 FOXQ1Q9C009 403 aa12.56□□□□□ -0.4
SMIM11A-201ENST00000399292 XYLT2Q9H1B5 865 aa12.56□□□□□ -0.4
SMIM11A-201ENST00000399292 VRTNQ9H8Y1 702 aa12.56□□□□□ -0.4
SMIM11A-201ENST00000399292 ZMYM5Q9UJ78 669 aa12.56□□□□□ -0.4
SMIM11A-201ENST00000399292 MAGED2Q9UNF1 606 aaPredicted RBP12.56□□□□□ -0.4
SMIM11A-201ENST00000399292 MYO15AQ9UKN7 3530 aa12.55□□□□□ -0.4
SMIM11A-201ENST00000399292 FAM170BA6NMN3 283 aa12.55□□□□□ -0.4
SMIM11A-201ENST00000399292 SLC38A8A6NNN8 435 aa12.55□□□□□ -0.4
SMIM11A-201ENST00000399292 A8MXQ7 604 aa12.55□□□□□ -0.4
SMIM11A-201ENST00000399292 AKAP3O75969 853 aa12.55□□□□□ -0.4
SMIM11A-201ENST00000399292 F11P03951 625 aa12.55□□□□□ -0.4
SMIM11A-201ENST00000399292 KRT13P13646 458 aa12.55□□□□□ -0.4
SMIM11A-201ENST00000399292 P4HA1P13674 534 aa12.55□□□□□ -0.4
SMIM11A-201ENST00000399292 PTPN1P18031 435 aaKnown RBP12.55□□□□□ -0.4
SMIM11A-201ENST00000399292 CD72P21854 359 aa12.55□□□□□ -0.4
SMIM11A-201ENST00000399292 BDNFP23560 247 aa12.55□□□□□ -0.4
SMIM11A-201ENST00000399292 DDX6P26196 483 aaKnown RBP eCLIP12.55□□□□□ -0.4
SMIM11A-201ENST00000399292 PSMC2P35998 433 aaKnown RBP12.55□□□□□ -0.4
SMIM11A-201ENST00000399292 GRIK1P39086 918 aa12.55□□□□□ -0.4
SMIM11A-201ENST00000399292 VAMP7P51809 220 aa12.55□□□□□ -0.4
SMIM11A-201ENST00000399292 NLRP12P59046 1061 aa12.55□□□□□ -0.4
SMIM11A-201ENST00000399292 CYP4F8P98187 520 aa12.55□□□□□ -0.4
SMIM11A-201ENST00000399292 CYP27A1Q02318 531 aa12.55□□□□□ -0.4
SMIM11A-201ENST00000399292 UBXN2BQ14CS0 331 aa12.55□□□□□ -0.4
SMIM11A-201ENST00000399292 CCDC142Q17RM4 750 aa12.55□□□□□ -0.4
SMIM11A-201ENST00000399292 ZNF699Q32M78 642 aa12.55□□□□□ -0.4
SMIM11A-201ENST00000399292 ZACNQ401N2 412 aa12.55□□□□□ -0.4
SMIM11A-201ENST00000399292 ZNF667Q5HYK9 610 aa12.55□□□□□ -0.4
SMIM11A-201ENST00000399292 VSTM1Q6UX27 236 aa12.55□□□□□ -0.4
SMIM11A-201ENST00000399292 ZNF852Q6ZMS4 543 aa12.55□□□□□ -0.4
SMIM11A-201ENST00000399292 INTS8Q75QN2 995 aaKnown RBP12.55□□□□□ -0.4
SMIM11A-201ENST00000399292 PJA1Q8NG27 643 aa12.55□□□□□ -0.4
SMIM11A-201ENST00000399292 MRPS31Q92665 395 aaKnown RBP12.55□□□□□ -0.4
SMIM11A-201ENST00000399292 MYRFLQ96LU7 910 aa12.55□□□□□ -0.4
SMIM11A-201ENST00000399292 SLC46A2Q9BY10 475 aa12.55□□□□□ -0.4
SMIM11A-201ENST00000399292 CRTAC1Q9NQ79 661 aa12.55□□□□□ -0.4
SMIM11A-201ENST00000399292 TRPV5Q9NQA5 729 aa12.55□□□□□ -0.4
SMIM11A-201ENST00000399292 HEBP1Q9NRV9 189 aa12.55□□□□□ -0.4
SMIM11A-201ENST00000399292 OBP2AQ9NY56 170 aa12.55□□□□□ -0.4
SMIM11A-201ENST00000399292 UXTQ9UBK9 157 aaPredicted RBP12.55□□□□□ -0.4
SMIM11A-201ENST00000399292 DMDP11532 3685 aa12.54□□□□□ -0.4
SMIM11A-201ENST00000399292 MAN2B1O00754 1011 aa12.54□□□□□ -0.4
SMIM11A-201ENST00000399292 NCAM2O15394 837 aa12.54□□□□□ -0.4
SMIM11A-201ENST00000399292 NOL4O94818 638 aa12.54□□□□□ -0.4
SMIM11A-201ENST00000399292 VNN1O95497 513 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms