RNA–Protein interactions for RNA: ENST00000399126.1

COL25A1-201, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-201ENST00000399126 OSBPL8Q9BZF1 889 aa15.89■□□□□ 0.13
COL25A1-201ENST00000399126 HPCAL4Q9UM19 191 aa15.89■□□□□ 0.13
COL25A1-201ENST00000399126 IVLP07476 585 aa15.89■□□□□ 0.13
COL25A1-201ENST00000399126 HSPA6P17066 643 aa15.89■□□□□ 0.13
COL25A1-201ENST00000399126 COILP38432 576 aaPredicted RBP15.89■□□□□ 0.13
COL25A1-201ENST00000399126 BRCC3P46736 316 aa15.89■□□□□ 0.13
COL25A1-201ENST00000399126 CYP1B1Q16678 543 aa15.89■□□□□ 0.13
COL25A1-201ENST00000399126 FUKQ8N0W3 1084 aa15.89■□□□□ 0.13
COL25A1-201ENST00000399126 EXD1Q8NHP7 514 aa15.89■□□□□ 0.13
COL25A1-201ENST00000399126 RXFP2Q8WXD0 754 aa15.89■□□□□ 0.13
COL25A1-201ENST00000399126 NDRG1Q92597 394 aaKnown RBP15.89■□□□□ 0.13
COL25A1-201ENST00000399126 CFAP57Q96MR6 1250 aa15.89■□□□□ 0.13
COL25A1-201ENST00000399126 DEFB118Q96PH6 123 aa15.89■□□□□ 0.13
COL25A1-201ENST00000399126 SLITRK1Q96PX8 696 aa15.89■□□□□ 0.13
COL25A1-201ENST00000399126 DDX43Q9NXZ2 648 aaKnown RBP15.89■□□□□ 0.13
COL25A1-201ENST00000399126 MTUS1Q9ULD2 1270 aa15.89■□□□□ 0.13
COL25A1-201ENST00000399126 PHF24Q9UPV7 400 aa15.89■□□□□ 0.13
COL25A1-201ENST00000399126 KBTBD13C9JR72 458 aa15.88■□□□□ 0.13
COL25A1-201ENST00000399126 GABRDO14764 452 aa15.88■□□□□ 0.13
COL25A1-201ENST00000399126 POLR3GO15318 223 aaPredicted RBP15.88■□□□□ 0.13
COL25A1-201ENST00000399126 LCP1P13796 627 aa15.88■□□□□ 0.13
COL25A1-201ENST00000399126 CHRNA3P32297 505 aa15.88■□□□□ 0.13
COL25A1-201ENST00000399126 RAB27AP51159 221 aa15.88■□□□□ 0.13
COL25A1-201ENST00000399126 ZC3H12AQ5D1E8 599 aaKnown RBP15.88■□□□□ 0.13
COL25A1-201ENST00000399126 PAQR9Q6ZVX9 377 aa15.88■□□□□ 0.13
COL25A1-201ENST00000399126 TMEM110Q86TL2 294 aa15.88■□□□□ 0.13
COL25A1-201ENST00000399126 ANKRD52Q8NB46 1076 aa15.88■□□□□ 0.13
COL25A1-201ENST00000399126 PLVAPQ9BX97 442 aa15.88■□□□□ 0.13
COL25A1-201ENST00000399126 CRTAC1Q9NQ79 661 aa15.88■□□□□ 0.13
COL25A1-201ENST00000399126 LRRD1A4D1F6 860 aa15.88■□□□□ 0.13
COL25A1-201ENST00000399126 C2CD4BA6NLJ0 364 aa15.88■□□□□ 0.13
COL25A1-201ENST00000399126 B3GAT3O94766 335 aa15.88■□□□□ 0.13
COL25A1-201ENST00000399126 CD48P09326 243 aa15.88■□□□□ 0.13
COL25A1-201ENST00000399126 TFE3P19532 575 aaPredicted RBP15.88■□□□□ 0.13
COL25A1-201ENST00000399126 ATP11AP98196 1134 aa15.88■□□□□ 0.13
COL25A1-201ENST00000399126 MDH1BQ5I0G3 518 aa15.88■□□□□ 0.13
COL25A1-201ENST00000399126 CD300LGQ6UXG3 332 aa15.88■□□□□ 0.13
COL25A1-201ENST00000399126 DSTYKQ6XUX3 929 aa15.88■□□□□ 0.13
COL25A1-201ENST00000399126 CCDC105Q8IYK2 499 aa15.88■□□□□ 0.13
COL25A1-201ENST00000399126 FNIP1Q8TF40 1166 aa15.88■□□□□ 0.13
COL25A1-201ENST00000399126 PEBP4Q96S96 227 aa15.88■□□□□ 0.13
COL25A1-201ENST00000399126 PCYOX1Q9UHG3 505 aa15.88■□□□□ 0.13
COL25A1-201ENST00000399126 SNX24Q9Y343 169 aa15.88■□□□□ 0.13
COL25A1-201ENST00000399126 SCN5AQ14524 2016 aa15.87■□□□□ 0.13
COL25A1-201ENST00000399126 PDGFRAP16234 1089 aa15.87■□□□□ 0.13
COL25A1-201ENST00000399126 PTPN1P18031 435 aaKnown RBP15.87■□□□□ 0.13
COL25A1-201ENST00000399126 NAT1P18440 290 aa15.87■□□□□ 0.13
COL25A1-201ENST00000399126 MIPP30301 263 aa15.87■□□□□ 0.13
COL25A1-201ENST00000399126 BST2Q10589 180 aaKnown RBP15.87■□□□□ 0.13
COL25A1-201ENST00000399126 GPNMBQ14956 572 aa15.87■□□□□ 0.13
COL25A1-201ENST00000399126 CLUL1Q15846 466 aa15.87■□□□□ 0.13
COL25A1-201ENST00000399126 RIN2Q8WYP3 895 aaPredicted RBP15.87■□□□□ 0.13
COL25A1-201ENST00000399126 ADAM33Q9BZ11 813 aa15.87■□□□□ 0.13
COL25A1-201ENST00000399126 UBXN6Q9BZV1 441 aa15.87■□□□□ 0.13
COL25A1-201ENST00000399126 SAGE1Q9NXZ1 904 aa15.87■□□□□ 0.13
COL25A1-201ENST00000399126 UTP11Q9Y3A2 253 aaKnown RBP15.87■□□□□ 0.13
COL25A1-201ENST00000399126 TSC2P49815 1807 aa15.87■□□□□ 0.13
COL25A1-201ENST00000399126 CPP00450 1065 aa15.87■□□□□ 0.13
COL25A1-201ENST00000399126 BCAT1P54687 386 aa15.87■□□□□ 0.13
COL25A1-201ENST00000399126 DUPD1Q68J44 220 aa15.87■□□□□ 0.13
COL25A1-201ENST00000399126 EMBQ6PCB8 327 aa15.87■□□□□ 0.13
COL25A1-201ENST00000399126 SPOCD1Q6ZMY3 1216 aa15.87■□□□□ 0.13
COL25A1-201ENST00000399126 C12orf50Q8NA57 414 aaPredicted RBP15.87■□□□□ 0.13
COL25A1-201ENST00000399126 SEC14L1Q92503 715 aa15.87■□□□□ 0.13
COL25A1-201ENST00000399126 HAUS1Q96CS2 278 aa15.87■□□□□ 0.13
COL25A1-201ENST00000399126 TNIP3Q96KP6 325 aa15.87■□□□□ 0.13
COL25A1-201ENST00000399126 FAM210AQ96ND0 272 aa15.87■□□□□ 0.13
COL25A1-201ENST00000399126 ERP44Q9BS26 406 aa15.87■□□□□ 0.13
COL25A1-201ENST00000399126 LRRC19Q9H756 370 aa15.87■□□□□ 0.13
COL25A1-201ENST00000399126 TMEM30AQ9NV96 361 aa15.87■□□□□ 0.13
COL25A1-201ENST00000399126 PSD3Q9NYI0 1048 aa15.87■□□□□ 0.13
COL25A1-201ENST00000399126 MYBPHLA2RUH7 354 aa15.86■□□□□ 0.13
COL25A1-201ENST00000399126 C9IYK1 514 aa15.86■□□□□ 0.13
COL25A1-201ENST00000399126 NBNO60934 754 aa15.86■□□□□ 0.13
COL25A1-201ENST00000399126 GPD1P21695 349 aa15.86■□□□□ 0.13
COL25A1-201ENST00000399126 ZNF143P52747 638 aaPredicted RBP15.86■□□□□ 0.13
COL25A1-201ENST00000399126 DHX34Q14147 1143 aaKnown RBP15.86■□□□□ 0.13
COL25A1-201ENST00000399126 CLLU1OSQ5K130 101 aa15.86■□□□□ 0.13
COL25A1-201ENST00000399126 MFSD4BQ5TF39 518 aa15.86■□□□□ 0.13
COL25A1-201ENST00000399126 LRRC38Q5VT99 294 aa15.86■□□□□ 0.13
COL25A1-201ENST00000399126 PRUNE1Q86TP1 453 aa15.86■□□□□ 0.13
COL25A1-201ENST00000399126 ZNF280BQ86YH2 543 aa15.86■□□□□ 0.13
COL25A1-201ENST00000399126 CAVIN3Q969G5 261 aa15.86■□□□□ 0.13
COL25A1-201ENST00000399126 RHOBTB2Q9BYZ6 727 aa15.86■□□□□ 0.13
COL25A1-201ENST00000399126 DCLK3Q9C098 648 aa15.86■□□□□ 0.13
COL25A1-201ENST00000399126 RGS18Q9NS28 235 aa15.86■□□□□ 0.13
COL25A1-201ENST00000399126 C3orf70A6NLC5 250 aaPredicted RBP15.86■□□□□ 0.13
COL25A1-201ENST00000399126 CACNA2D1P54289 1103 aa15.86■□□□□ 0.13
COL25A1-201ENST00000399126 SLC6A3Q01959 620 aa15.86■□□□□ 0.13
COL25A1-201ENST00000399126 ARHGEF6Q15052 776 aa15.86■□□□□ 0.13
COL25A1-201ENST00000399126 TRIP13Q15645 432 aaPredicted RBP15.86■□□□□ 0.13
COL25A1-201ENST00000399126 CCDC14Q49A88 953 aa15.86■□□□□ 0.13
COL25A1-201ENST00000399126 LRRC8DQ7L1W4 858 aa15.86■□□□□ 0.13
COL25A1-201ENST00000399126 PIGZQ86VD9 579 aa15.86■□□□□ 0.13
COL25A1-201ENST00000399126 FAM126BQ8IXS8 530 aa15.86■□□□□ 0.13
COL25A1-201ENST00000399126 RTP3Q9BQQ7 232 aa15.86■□□□□ 0.13
COL25A1-201ENST00000399126 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.86■□□□□ 0.13
COL25A1-201ENST00000399126 SETSIPP0DME0 302 aa15.85■□□□□ 0.13
COL25A1-201ENST00000399126 RPL21P46778 160 aaKnown RBP15.85■□□□□ 0.13
COL25A1-201ENST00000399126 CDK7P50613 346 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms