RNA–Protein interactions for RNA: ENST00000399120.5

HLCS-202, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,466 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-202ENST00000399120 DNAJC3Q13217 504 aa12.02□□□□□ -0.49
HLCS-202ENST00000399120 GPAT2Q6NUI2 795 aa12.02□□□□□ -0.49
HLCS-202ENST00000399120 SYNE4Q8N205 404 aa12.02□□□□□ -0.49
HLCS-202ENST00000399120 FEZF2Q8TBJ5 459 aa12.02□□□□□ -0.49
HLCS-202ENST00000399120 MAGED4Q96JG8 741 aa12.02□□□□□ -0.49
HLCS-202ENST00000399120 NOD2Q9HC29 1040 aa12.02□□□□□ -0.49
HLCS-202ENST00000399120 DCP1AQ9NPI6 582 aaPredicted RBP12.02□□□□□ -0.49
HLCS-202ENST00000399120 PTPRTO14522 1441 aa12.02□□□□□ -0.49
HLCS-202ENST00000399120 PSTPIP1O43586 416 aa12.02□□□□□ -0.49
HLCS-202ENST00000399120 PDE9AO76083 593 aa12.02□□□□□ -0.49
HLCS-202ENST00000399120 C6orf222P0C671 652 aaPredicted RBP12.02□□□□□ -0.49
HLCS-202ENST00000399120 UCHL3P15374 230 aa12.02□□□□□ -0.49
HLCS-202ENST00000399120 TNNI3P19429 210 aa12.02□□□□□ -0.49
HLCS-202ENST00000399120 ZNF284Q2VY69 593 aa12.02□□□□□ -0.49
HLCS-202ENST00000399120 PEG10Q86TG7 708 aaKnown RBP12.02□□□□□ -0.49
HLCS-202ENST00000399120 CAMKK1Q8N5S9 505 aa12.02□□□□□ -0.49
HLCS-202ENST00000399120 ENKURQ8TC29 256 aa12.02□□□□□ -0.49
HLCS-202ENST00000399120 UTP15Q8TED0 518 aaKnown RBP12.02□□□□□ -0.49
HLCS-202ENST00000399120 TRPC4APQ8TEL6 797 aa12.02□□□□□ -0.49
HLCS-202ENST00000399120 NACC2Q96BF6 587 aa12.02□□□□□ -0.49
HLCS-202ENST00000399120 RMND5BQ96G75 393 aaPredicted RBP12.02□□□□□ -0.49
HLCS-202ENST00000399120 S100A13Q99584 98 aa12.02□□□□□ -0.49
HLCS-202ENST00000399120 EMILIN2Q9BXX0 1053 aa12.02□□□□□ -0.49
HLCS-202ENST00000399120 COMMD8Q9NX08 183 aa12.02□□□□□ -0.49
HLCS-202ENST00000399120 RAD54BQ9Y620 910 aa12.02□□□□□ -0.49
HLCS-202ENST00000399120 S100A9P06702 114 aaKnown RBP12.02□□□□□ -0.49
HLCS-202ENST00000399120 EPHB2P29323 1055 aa12.02□□□□□ -0.49
HLCS-202ENST00000399120 VAC14Q08AM6 782 aa12.02□□□□□ -0.49
HLCS-202ENST00000399120 PDIA5Q14554 519 aa12.02□□□□□ -0.49
HLCS-202ENST00000399120 NAA30Q147X3 362 aaPredicted RBP12.02□□□□□ -0.49
HLCS-202ENST00000399120 ATF7IP2Q5U623 682 aa12.02□□□□□ -0.49
HLCS-202ENST00000399120 RIN2Q8WYP3 895 aaPredicted RBP12.02□□□□□ -0.49
HLCS-202ENST00000399120 PPP1R10Q96QC0 940 aaKnown RBP12.02□□□□□ -0.49
HLCS-202ENST00000399120 KCTD14Q9BQ13 255 aaPredicted RBP12.02□□□□□ -0.49
HLCS-202ENST00000399120 UBE2OQ9C0C9 1292 aaKnown RBP12.02□□□□□ -0.49
HLCS-202ENST00000399120 WDCPQ9H6R7 721 aa12.02□□□□□ -0.49
HLCS-202ENST00000399120 MIEF1Q9NQG6 463 aa12.02□□□□□ -0.49
HLCS-202ENST00000399120 HEY2Q9UBP5 337 aa12.02□□□□□ -0.49
HLCS-202ENST00000399120 AAR2Q9Y312 384 aaKnown RBP12.02□□□□□ -0.49
HLCS-202ENST00000399120 PCDHB2Q9Y5E7 798 aa12.02□□□□□ -0.49
HLCS-202ENST00000399120 ZNF24P17028 368 aa12.01□□□□□ -0.49
HLCS-202ENST00000399120 GTF2H1P32780 548 aa12.01□□□□□ -0.49
HLCS-202ENST00000399120 TMEM62Q0P6H9 643 aa12.01□□□□□ -0.49
HLCS-202ENST00000399120 CDC73Q6P1J9 531 aa12.01□□□□□ -0.49
HLCS-202ENST00000399120 TMEM26Q6ZUK4 368 aa12.01□□□□□ -0.49
HLCS-202ENST00000399120 SCUBE1Q8IWY4 988 aa12.01□□□□□ -0.49
HLCS-202ENST00000399120 FAM120BQ96EK7 910 aaKnown RBP12.01□□□□□ -0.49
HLCS-202ENST00000399120 RBM12Q9NTZ6 932 aaKnown RBP12.01□□□□□ -0.49
HLCS-202ENST00000399120 RNF181Q9P0P0 153 aa12.01□□□□□ -0.49
HLCS-202ENST00000399120 COQ6Q9Y2Z9 468 aa12.01□□□□□ -0.49
HLCS-202ENST00000399120 TTLL13PA6NNM8 815 aa12.01□□□□□ -0.49
HLCS-202ENST00000399120 HLA-DRAP01903 254 aa12.01□□□□□ -0.49
HLCS-202ENST00000399120 DMPKQ09013 629 aa12.01□□□□□ -0.49
HLCS-202ENST00000399120 MIEF2Q96C03 454 aa12.01□□□□□ -0.49
HLCS-202ENST00000399120 ZNF624Q9P2J8 865 aaPredicted RBP12.01□□□□□ -0.49
HLCS-202ENST00000399120 SF3B1O75533 1304 aaKnown RBP eCLIP12.01□□□□□ -0.492e-6■■■■■ 101.7
HLCS-202ENST00000399120 ATP10BO94823 1461 aa12.01□□□□□ -0.49
HLCS-202ENST00000399120 MED26O95402 600 aa12.01□□□□□ -0.49
HLCS-202ENST00000399120 PABPC1P11940 636 aaKnown RBP12.01□□□□□ -0.49
HLCS-202ENST00000399120 RFC5P40937 340 aa12.01□□□□□ -0.49
HLCS-202ENST00000399120 OVGP1Q12889 678 aa12.01□□□□□ -0.49
HLCS-202ENST00000399120 EMC2Q15006 297 aa12.01□□□□□ -0.49
HLCS-202ENST00000399120 NECAB2Q7Z6G3 386 aa12.01□□□□□ -0.49
HLCS-202ENST00000399120 ZNF677Q86XU0 584 aa12.01□□□□□ -0.49
HLCS-202ENST00000399120 KRT73Q86Y46 540 aa12.01□□□□□ -0.49
HLCS-202ENST00000399120 SVOPQ8N4V2 548 aa12.01□□□□□ -0.49
HLCS-202ENST00000399120 MDM1Q8TC05 714 aa12.01□□□□□ -0.49
HLCS-202ENST00000399120 BHMTQ93088 406 aa12.01□□□□□ -0.49
HLCS-202ENST00000399120 KLHL4Q9C0H6 718 aa12.01□□□□□ -0.49
HLCS-202ENST00000399120 PHTF1Q9UMS5 762 aa12.01□□□□□ -0.49
HLCS-202ENST00000399120 SNX8Q9Y5X2 465 aa12.01□□□□□ -0.49
HLCS-202ENST00000399120 ERBB3P21860 1342 aa12.01□□□□□ -0.49
HLCS-202ENST00000399120 PARNO95453 639 aaKnown RBP12.01□□□□□ -0.49
HLCS-202ENST00000399120 SRGNP10124 158 aa12.01□□□□□ -0.49
HLCS-202ENST00000399120 GRK4P32298 578 aa12.01□□□□□ -0.49
HLCS-202ENST00000399120 CASP12Q6UXS9 341 aa12.01□□□□□ -0.49
HLCS-202ENST00000399120 ZIM3Q96PE6 472 aa12.01□□□□□ -0.49
HLCS-202ENST00000399120 CHP1Q99653 195 aa12.01□□□□□ -0.49
HLCS-202ENST00000399120 ERP44Q9BS26 406 aa12.01□□□□□ -0.49
HLCS-202ENST00000399120 CEP44Q9C0F1 390 aa12.01□□□□□ -0.49
HLCS-202ENST00000399120 CLPBQ9H078 707 aa12.01□□□□□ -0.49
HLCS-202ENST00000399120 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.01□□□□□ -0.49
HLCS-202ENST00000399120 GPRC5DQ9NZD1 345 aa12.01□□□□□ -0.49
HLCS-202ENST00000399120 F5H5T6 163 aa12.01□□□□□ -0.49
HLCS-202ENST00000399120 PSMD14O00487 310 aa12.01□□□□□ -0.49
HLCS-202ENST00000399120 BMP10O95393 424 aa12.01□□□□□ -0.49
HLCS-202ENST00000399120 ECDO95905 644 aaPredicted RBP12.01□□□□□ -0.49
HLCS-202ENST00000399120 PAICSP22234 425 aaKnown RBP12.01□□□□□ -0.49
HLCS-202ENST00000399120 AKAP5P24588 427 aa12.01□□□□□ -0.49
HLCS-202ENST00000399120 RALGDSQ12967 914 aa12.01□□□□□ -0.49
HLCS-202ENST00000399120 SEL1L3Q68CR1 1132 aa12.01□□□□□ -0.49
HLCS-202ENST00000399120 CLEC4GQ6UXB4 293 aa12.01□□□□□ -0.49
HLCS-202ENST00000399120 DENND5BQ6ZUT9 1274 aa12.01□□□□□ -0.49
HLCS-202ENST00000399120 UBASH3BQ8TF42 649 aa12.01□□□□□ -0.49
HLCS-202ENST00000399120 ABI2Q9NYB9 513 aaPredicted RBP12.01□□□□□ -0.49
HLCS-202ENST00000399120 MAP10Q9P2G4 905 aa12.01□□□□□ -0.49
HLCS-202ENST00000399120 MAST1Q9Y2H9 1570 aa12□□□□□ -0.49
HLCS-202ENST00000399120 IQCA1LA6NCM1 817 aa12□□□□□ -0.49
HLCS-202ENST00000399120 ZCCHC18P0CG32 403 aa12□□□□□ -0.49
HLCS-202ENST00000399120 COILP38432 576 aaPredicted RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms