RNA–Protein interactions for RNA: ENST00000398339.5

TCF4-203, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-203ENST00000398339 TDRD10Q5VZ19 366 aaKnown RBP8.63□□□□□ -1.03
TCF4-203ENST00000398339 RNF168Q8IYW5 571 aaPredicted RBP8.63□□□□□ -1.03
TCF4-203ENST00000398339 RBM15BQ8NDT2 890 aaKnown RBP8.63□□□□□ -1.03
TCF4-203ENST00000398339 DTNBP1Q96EV8 351 aa8.63□□□□□ -1.03
TCF4-203ENST00000398339 FNBP1Q96RU3 617 aa8.63□□□□□ -1.03
TCF4-203ENST00000398339 CYTH2Q99418 400 aa8.63□□□□□ -1.03
TCF4-203ENST00000398339 SPATA16Q9BXB7 569 aa8.63□□□□□ -1.03
TCF4-203ENST00000398339 C10orf88Q9H8K7 445 aa8.63□□□□□ -1.03
TCF4-203ENST00000398339 ANKEF1Q9NU02 776 aa8.63□□□□□ -1.03
TCF4-203ENST00000398339 NDE1Q9NXR1 346 aa8.63□□□□□ -1.03
TCF4-203ENST00000398339 DDX56Q9NY93 547 aaKnown RBP8.63□□□□□ -1.03
TCF4-203ENST00000398339 KCNK4Q9NYG8 393 aa8.63□□□□□ -1.03
TCF4-203ENST00000398339 COL20A1Q9P218 1284 aa8.63□□□□□ -1.03
TCF4-203ENST00000398339 DNAJB4Q9UDY4 337 aa8.63□□□□□ -1.03
TCF4-203ENST00000398339 TMX2Q9Y320 296 aa8.63□□□□□ -1.03
TCF4-203ENST00000398339 UBIAD1Q9Y5Z9 338 aa8.63□□□□□ -1.03
TCF4-203ENST00000398339 SLC4A7Q9Y6M7 1214 aa8.63□□□□□ -1.03
TCF4-203ENST00000398339 TCRBV7S3A2A0A539 114 aa8.62□□□□□ -1.03
TCF4-203ENST00000398339 HNRNPDLO14979 420 aaKnown RBP8.62□□□□□ -1.03
TCF4-203ENST00000398339 CREB3O43889 395 aa8.62□□□□□ -1.03
TCF4-203ENST00000398339 TMEM63AO94886 807 aa8.62□□□□□ -1.03
TCF4-203ENST00000398339 C4BPAP04003 597 aaKnown RBP8.62□□□□□ -1.03
TCF4-203ENST00000398339 MMP8P22894 467 aa8.62□□□□□ -1.03
TCF4-203ENST00000398339 HOXD10P28358 340 aa8.62□□□□□ -1.03
TCF4-203ENST00000398339 RPL22P35268 128 aaKnown RBP8.62□□□□□ -1.03
TCF4-203ENST00000398339 CDK7P50613 346 aa8.62□□□□□ -1.03
TCF4-203ENST00000398339 CLDN10P78369 228 aa8.62□□□□□ -1.03
TCF4-203ENST00000398339 OGDHQ02218 1023 aa8.62□□□□□ -1.03
TCF4-203ENST00000398339 FAAP100Q0VG06 881 aa8.62□□□□□ -1.03
TCF4-203ENST00000398339 HSF5Q4G112 596 aaPredicted RBP8.62□□□□□ -1.03
TCF4-203ENST00000398339 RASIP1Q5U651 963 aa8.62□□□□□ -1.03
TCF4-203ENST00000398339 ULK2Q8IYT8 1036 aa8.62□□□□□ -1.03
TCF4-203ENST00000398339 SMC1BQ8NDV3 1235 aa8.62□□□□□ -1.03
TCF4-203ENST00000398339 NTPCRQ9BSD7 190 aaKnown RBP8.62□□□□□ -1.03
TCF4-203ENST00000398339 DEFB129Q9H1M3 183 aa8.62□□□□□ -1.03
TCF4-203ENST00000398339 APOBEC3GQ9HC16 384 aaKnown RBP8.62□□□□□ -1.03
TCF4-203ENST00000398339 GPAMQ9HCL2 828 aa8.62□□□□□ -1.03
TCF4-203ENST00000398339 IL1RAPL1Q9NZN1 696 aa8.62□□□□□ -1.03
TCF4-203ENST00000398339 TCRBV5S1A1TA0A578 114 aa8.62□□□□□ -1.03
TCF4-203ENST00000398339 SPECC1L-ADORA2AF8WAN1 911 aa8.62□□□□□ -1.03
TCF4-203ENST00000398339 VNN1O95497 513 aa8.62□□□□□ -1.03
TCF4-203ENST00000398339 WNT7BP56706 349 aa8.62□□□□□ -1.03
TCF4-203ENST00000398339 OTUD4Q01804 1114 aaKnown RBP8.62□□□□□ -1.03
TCF4-203ENST00000398339 CDC16Q13042 620 aa8.62□□□□□ -1.03
TCF4-203ENST00000398339 MTM1Q13496 603 aa8.62□□□□□ -1.03
TCF4-203ENST00000398339 PSMD6Q15008 389 aa8.62□□□□□ -1.03
TCF4-203ENST00000398339 DNAL1Q4LDG9 190 aa8.62□□□□□ -1.03
TCF4-203ENST00000398339 LIN52Q52LA3 116 aa8.62□□□□□ -1.03
TCF4-203ENST00000398339 GJC2Q5T442 439 aaPredicted RBP8.62□□□□□ -1.03
TCF4-203ENST00000398339 PDIK1LQ8N165 341 aa8.62□□□□□ -1.03
TCF4-203ENST00000398339 MYO1HQ8N1T3 1032 aa8.62□□□□□ -1.03
TCF4-203ENST00000398339 TAB3Q8N5C8 712 aaPredicted RBP8.62□□□□□ -1.03
TCF4-203ENST00000398339 ANKK1Q8NFD2 765 aa8.62□□□□□ -1.03
TCF4-203ENST00000398339 ACTL9Q8TC94 416 aa8.62□□□□□ -1.03
TCF4-203ENST00000398339 SLC44A1Q8WWI5 657 aa8.62□□□□□ -1.03
TCF4-203ENST00000398339 PPP2R3CQ969Q6 453 aa8.62□□□□□ -1.03
TCF4-203ENST00000398339 CLPTM1LQ96KA5 538 aa8.62□□□□□ -1.03
TCF4-203ENST00000398339 MCEEQ96PE7 176 aa8.62□□□□□ -1.03
TCF4-203ENST00000398339 VCX3BQ9H321 246 aa8.62□□□□□ -1.03
TCF4-203ENST00000398339 VCX3AQ9NNX9 186 aa8.62□□□□□ -1.03
TCF4-203ENST00000398339 TBC1D22BQ9NU19 505 aa8.62□□□□□ -1.03
TCF4-203ENST00000398339 STK32BQ9NY57 414 aa8.62□□□□□ -1.03
TCF4-203ENST00000398339 SAE1Q9UBE0 346 aaPredicted RBP8.62□□□□□ -1.03
TCF4-203ENST00000398339 PPARGC1AQ9UBK2 798 aaKnown RBP8.62□□□□□ -1.03
TCF4-203ENST00000398339 TUBGCP4Q9UGJ1 667 aa8.62□□□□□ -1.03
TCF4-203ENST00000398339 SLC7A8Q9UHI5 535 aa8.62□□□□□ -1.03
TCF4-203ENST00000398339 TAGLN3Q9UI15 199 aa8.62□□□□□ -1.03
TCF4-203ENST00000398339 XPO7Q9UIA9 1087 aaKnown RBP8.62□□□□□ -1.03
TCF4-203ENST00000398339 CNTN6Q9UQ52 1028 aa8.62□□□□□ -1.03
TCF4-203ENST00000398339 CHMP2BQ9UQN3 213 aa8.62□□□□□ -1.03
TCF4-203ENST00000398339 TBC1D30Q9Y2I9 924 aa8.62□□□□□ -1.03
TCF4-203ENST00000398339 C3orf70A6NLC5 250 aaPredicted RBP8.61□□□□□ -1.03
TCF4-203ENST00000398339 BUD23O43709 281 aaKnown RBP8.61□□□□□ -1.03
TCF4-203ENST00000398339 EXTL3O43909 919 aa8.61□□□□□ -1.03
TCF4-203ENST00000398339 BAG2O95816 211 aa8.61□□□□□ -1.03
TCF4-203ENST00000398339 CALB1P05937 261 aa8.61□□□□□ -1.03
TCF4-203ENST00000398339 TNNI1P19237 187 aa8.61□□□□□ -1.03
TCF4-203ENST00000398339 HOXD11P31277 338 aaPredicted RBP8.61□□□□□ -1.03
TCF4-203ENST00000398339 SOX10P56693 466 aa8.61□□□□□ -1.03
TCF4-203ENST00000398339 DYNLT1P63172 113 aa8.61□□□□□ -1.03
TCF4-203ENST00000398339 ZNF200P98182 395 aaPredicted RBP8.61□□□□□ -1.03
TCF4-203ENST00000398339 MTMR1Q13613 665 aa8.61□□□□□ -1.03
TCF4-203ENST00000398339 HNRNPDQ14103 355 aaKnown RBP8.61□□□□□ -1.03
TCF4-203ENST00000398339 MDH1BQ5I0G3 518 aa8.61□□□□□ -1.03
TCF4-203ENST00000398339 DPY19L2Q6NUT2 758 aa8.61□□□□□ -1.03
TCF4-203ENST00000398339 DNAJC24Q6P3W2 148 aa8.61□□□□□ -1.03
TCF4-203ENST00000398339 IGDCC3Q8IVU1 814 aa8.61□□□□□ -1.03
TCF4-203ENST00000398339 C7orf26Q96N11 449 aa8.61□□□□□ -1.03
TCF4-203ENST00000398339 TTC1Q99614 292 aa8.61□□□□□ -1.03
TCF4-203ENST00000398339 CENPKQ9BS16 269 aa8.61□□□□□ -1.03
TCF4-203ENST00000398339 THTPAQ9BU02 230 aa8.61□□□□□ -1.03
TCF4-203ENST00000398339 FRMD8P1Q9BZ68 369 aaPredicted RBP8.61□□□□□ -1.03
TCF4-203ENST00000398339 DBNDD1Q9H9R9 158 aa8.61□□□□□ -1.03
TCF4-203ENST00000398339 PPM1HQ9ULR3 514 aa8.61□□□□□ -1.03
TCF4-203ENST00000398339 IKBKGQ9Y6K9 419 aa8.61□□□□□ -1.03
TCF4-203ENST00000398339 TCRBV9S1A1TA0A576 114 aa8.61□□□□□ -1.03
TCF4-203ENST00000398339 I3L4J1 428 aa8.61□□□□□ -1.03
TCF4-203ENST00000398339 COPEO14579 308 aa8.61□□□□□ -1.03
TCF4-203ENST00000398339 RNASEH1O60930 286 aaKnown RBP8.61□□□□□ -1.03
TCF4-203ENST00000398339 ENTPD3O75355 529 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms