RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 B3GNTL1Q67FW5 361 aaPredicted RBP3.31□□□□□ -1.88
CD47-203ENST00000398258 FCRL6Q6DN72 434 aa3.31□□□□□ -1.88
CD47-203ENST00000398258 TLDC1Q6P9B6 456 aa3.31□□□□□ -1.88
CD47-203ENST00000398258 FOXR2Q6PJQ5 311 aa3.31□□□□□ -1.88
CD47-203ENST00000398258 USP17L6PQ6QN14 398 aa3.31□□□□□ -1.88
CD47-203ENST00000398258 UNC13DQ70J99 1090 aa3.31□□□□□ -1.88
CD47-203ENST00000398258 MYLK4Q86YV6 388 aaPredicted RBP3.31□□□□□ -1.88
CD47-203ENST00000398258 LIX1LQ8IVB5 337 aa3.31□□□□□ -1.88
CD47-203ENST00000398258 TMEM132CQ8N3T6 1108 aa3.31□□□□□ -1.88
CD47-203ENST00000398258 SLC15A4Q8N697 577 aa3.31□□□□□ -1.88
CD47-203ENST00000398258 SLC17A8Q8NDX2 589 aa3.31□□□□□ -1.88
CD47-203ENST00000398258 NSUN7Q8NE18 718 aaKnown RBP3.31□□□□□ -1.88
CD47-203ENST00000398258 IPCEF1Q8WWN9 437 aaPredicted RBP3.31□□□□□ -1.88
CD47-203ENST00000398258 SPSB4Q96A44 273 aa3.31□□□□□ -1.88
CD47-203ENST00000398258 LRIG1Q96JA1 1093 aa3.31□□□□□ -1.88
CD47-203ENST00000398258 MOGAT1Q96PD6 335 aa3.31□□□□□ -1.88
CD47-203ENST00000398258 PNKPQ96T60 521 aa3.31□□□□□ -1.88
CD47-203ENST00000398258 HEPHQ9BQS7 1158 aa3.31□□□□□ -1.88
CD47-203ENST00000398258 IMPG2Q9BZV3 1241 aa3.31□□□□□ -1.88
CD47-203ENST00000398258 AGO4Q9HCK5 861 aaKnown RBP3.31□□□□□ -1.88
CD47-203ENST00000398258 NECTIN3Q9NQS3 549 aa3.31□□□□□ -1.88
CD47-203ENST00000398258 TM7SF3Q9NS93 570 aa3.31□□□□□ -1.88
CD47-203ENST00000398258 MRPS18AQ9NVS2 196 aaKnown RBP3.31□□□□□ -1.88
CD47-203ENST00000398258 RNF181Q9P0P0 153 aa3.31□□□□□ -1.88
CD47-203ENST00000398258 CTTNBP2NLQ9P2B4 639 aa3.31□□□□□ -1.88
CD47-203ENST00000398258 DKK4Q9UBT3 224 aa3.31□□□□□ -1.88
CD47-203ENST00000398258 ZNF580Q9UK33 172 aa3.31□□□□□ -1.88
CD47-203ENST00000398258 MTO1Q9Y2Z2 717 aaKnown RBP3.31□□□□□ -1.88
CD47-203ENST00000398258 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.31□□□□□ -1.88
CD47-203ENST00000398258 NOX1Q9Y5S8 564 aa3.31□□□□□ -1.88
CD47-203ENST00000398258 CCDC195A0A1B0GUA6 201 aa3.3□□□□□ -1.88
CD47-203ENST00000398258 LOC102723971A0A1B0GUV8 181 aa3.3□□□□□ -1.88
CD47-203ENST00000398258 A0A1W2PS29 197 aa3.3□□□□□ -1.88
CD47-203ENST00000398258 TMEM233B4DJY2 109 aa3.3□□□□□ -1.88
CD47-203ENST00000398258 M0QYG6 137 aa3.3□□□□□ -1.88
CD47-203ENST00000398258 FFAR2O15552 330 aa3.3□□□□□ -1.88
CD47-203ENST00000398258 NTN1O95631 604 aa3.3□□□□□ -1.88
CD47-203ENST00000398258 FGAP02671 866 aa3.3□□□□□ -1.88
CD47-203ENST00000398258 ATXN1LP0C7T5 689 aaKnown RBP3.3□□□□□ -1.88
CD47-203ENST00000398258 MYL4P12829 197 aa3.3□□□□□ -1.88
CD47-203ENST00000398258 BTF3P20290 206 aaKnown RBP3.3□□□□□ -1.88
CD47-203ENST00000398258 IL1R2P27930 398 aa3.3□□□□□ -1.88
CD47-203ENST00000398258 ITPKBP27987 946 aa3.3□□□□□ -1.88
CD47-203ENST00000398258 TECP42680 631 aa3.3□□□□□ -1.88
CD47-203ENST00000398258 CARSP49589 748 aaKnown RBP3.3□□□□□ -1.88
CD47-203ENST00000398258 COPAP53621 1224 aa3.3□□□□□ -1.88
CD47-203ENST00000398258 ZNF844Q08AG5 666 aa3.3□□□□□ -1.88
CD47-203ENST00000398258 FOXO1Q12778 655 aa3.3□□□□□ -1.88
CD47-203ENST00000398258 BOP1Q14137 746 aaKnown RBP3.3□□□□□ -1.88
CD47-203ENST00000398258 ZRSR2Q15696 482 aaKnown RBP3.3□□□□□ -1.88
CD47-203ENST00000398258 SPDYE7PQ495Y7 208 aa3.3□□□□□ -1.88
CD47-203ENST00000398258 PGBD2Q6P3X8 592 aa3.3□□□□□ -1.88
CD47-203ENST00000398258 RNF44Q7L0R7 432 aa3.3□□□□□ -1.88
CD47-203ENST00000398258 SKAP1Q86WV1 359 aa3.3□□□□□ -1.88
CD47-203ENST00000398258 KRT73Q86Y46 540 aa3.3□□□□□ -1.88
CD47-203ENST00000398258 YAF2Q8IY57 180 aa3.3□□□□□ -1.88
CD47-203ENST00000398258 SYTL1Q8IYJ3 562 aa3.3□□□□□ -1.88
CD47-203ENST00000398258 CCDC33Q8N5R6 958 aa3.3□□□□□ -1.88
CD47-203ENST00000398258 FAM46DQ8NEK8 389 aa3.3□□□□□ -1.88
CD47-203ENST00000398258 VPS37AQ8NEZ2 397 aa3.3□□□□□ -1.88
CD47-203ENST00000398258 NACC2Q96BF6 587 aa3.3□□□□□ -1.88
CD47-203ENST00000398258 NELL2Q99435 816 aa3.3□□□□□ -1.88
CD47-203ENST00000398258 ISCA1Q9BUE6 129 aa3.3□□□□□ -1.88
CD47-203ENST00000398258 FAM83DQ9H4H8 585 aa3.3□□□□□ -1.88
CD47-203ENST00000398258 TMEM74BQ9NUR3 256 aa3.3□□□□□ -1.88
CD47-203ENST00000398258 KCNE5Q9UJ90 142 aa3.3□□□□□ -1.88
CD47-203ENST00000398258 CDC23Q9UJX2 597 aa3.3□□□□□ -1.88
CD47-203ENST00000398258 PCDHGB2Q9Y5G2 931 aa3.3□□□□□ -1.88
CD47-203ENST00000398258 MANSC4A6NHS7 340 aaPredicted RBP3.29□□□□□ -1.88
CD47-203ENST00000398258 MYO1CO00159 1063 aa3.29□□□□□ -1.88
CD47-203ENST00000398258 POLRMTO00411 1230 aaKnown RBP3.29□□□□□ -1.88
CD47-203ENST00000398258 PIP5K1CO60331 668 aa3.29□□□□□ -1.88
CD47-203ENST00000398258 SUN1O94901 812 aa3.29□□□□□ -1.88
CD47-203ENST00000398258 IGKV2-30P06310 120 aa3.29□□□□□ -1.88
CD47-203ENST00000398258 KCNA2P16389 499 aa3.29□□□□□ -1.88
CD47-203ENST00000398258 ACVR2AP27037 513 aa3.29□□□□□ -1.88
CD47-203ENST00000398258 PDIA3P30101 505 aaKnown RBP3.29□□□□□ -1.88
CD47-203ENST00000398258 HALP42357 657 aa3.29□□□□□ -1.88
CD47-203ENST00000398258 GRK6P43250 576 aa3.29□□□□□ -1.88
CD47-203ENST00000398258 ALDH9A1P49189 494 aa3.29□□□□□ -1.88
CD47-203ENST00000398258 ANXA11P50995 505 aaKnown RBP3.29□□□□□ -1.88
CD47-203ENST00000398258 MC2RQ01718 297 aa3.29□□□□□ -1.88
CD47-203ENST00000398258 ICA1Q05084 483 aa3.29□□□□□ -1.88
CD47-203ENST00000398258 GALNT1Q10472 559 aaPredicted RBP3.29□□□□□ -1.88
CD47-203ENST00000398258 RAPGEF1Q13905 1077 aa3.29□□□□□ -1.88
CD47-203ENST00000398258 IQCB1Q15051 598 aa3.29□□□□□ -1.88
CD47-203ENST00000398258 PUM3Q15397 648 aaKnown RBP3.29□□□□□ -1.88
CD47-203ENST00000398258 CYP2A13Q16696 494 aa3.29□□□□□ -1.88
CD47-203ENST00000398258 GEN1Q17RS7 908 aa3.29□□□□□ -1.88
CD47-203ENST00000398258 ARMC6Q6NXE6 501 aa3.29□□□□□ -1.88
CD47-203ENST00000398258 TAPT1Q6NXT6 567 aa3.29□□□□□ -1.88
CD47-203ENST00000398258 TAF2Q6P1X5 1199 aa3.29□□□□□ -1.88
CD47-203ENST00000398258 KIAA0408Q6ZU52 694 aa3.29□□□□□ -1.88
CD47-203ENST00000398258 CACNA2D3Q8IZS8 1091 aa3.29□□□□□ -1.88
CD47-203ENST00000398258 FAM109AQ8N4B1 249 aa3.29□□□□□ -1.88
CD47-203ENST00000398258 PCSK9Q8NBP7 692 aaKnown RBP3.29□□□□□ -1.88
CD47-203ENST00000398258 PSD4Q8NDX1 1056 aa3.29□□□□□ -1.88
CD47-203ENST00000398258 TMEM125Q96AQ2 219 aa3.29□□□□□ -1.88
CD47-203ENST00000398258 BOD1Q96IK1 185 aa3.29□□□□□ -1.88
CD47-203ENST00000398258 TRIB1Q96RU8 372 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms