RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 PEX5P50542 639 aa20.48■□□□□ 0.87
PDLIM2-205ENST00000397761 SLC8B1Q6J4K2 584 aa20.48■□□□□ 0.87
PDLIM2-205ENST00000397761 RSPO2Q6UXX9 243 aaPredicted RBP20.48■□□□□ 0.87
PDLIM2-205ENST00000397761 CPNE8Q86YQ8 564 aa20.48■□□□□ 0.87
PDLIM2-205ENST00000397761 CREG2Q8IUH2 290 aa20.48■□□□□ 0.87
PDLIM2-205ENST00000397761 SPATA2LQ8IUW3 424 aaPredicted RBP20.48■□□□□ 0.87
PDLIM2-205ENST00000397761 GPR65Q8IYL9 337 aa20.48■□□□□ 0.87
PDLIM2-205ENST00000397761 SCML4Q8N228 414 aa20.48■□□□□ 0.87
PDLIM2-205ENST00000397761 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.48■□□□□ 0.87
PDLIM2-205ENST00000397761 COG1Q8WTW3 980 aa20.48■□□□□ 0.87
PDLIM2-205ENST00000397761 LBHD1Q9BQE6 289 aaPredicted RBP20.48■□□□□ 0.87
PDLIM2-205ENST00000397761 MTIF3Q9H2K0 278 aaKnown RBP20.48■□□□□ 0.87
PDLIM2-205ENST00000397761 AAASQ9NRG9 546 aa20.48■□□□□ 0.87
PDLIM2-205ENST00000397761 CCDC66A2RUB6 948 aa20.47■□□□□ 0.87
PDLIM2-205ENST00000397761 C2CD4BA6NLJ0 364 aa20.47■□□□□ 0.87
PDLIM2-205ENST00000397761 SRGAP2O75044 1071 aa20.47■□□□□ 0.87
PDLIM2-205ENST00000397761 FBXO21O94952 628 aa20.47■□□□□ 0.87
PDLIM2-205ENST00000397761 DSG1Q02413 1049 aa20.47■□□□□ 0.87
PDLIM2-205ENST00000397761 ADIGQ0VDE8 80 aa20.47■□□□□ 0.87
PDLIM2-205ENST00000397761 ACAP1Q15027 740 aa20.47■□□□□ 0.87
PDLIM2-205ENST00000397761 PTPROQ16827 1216 aa20.47■□□□□ 0.87
PDLIM2-205ENST00000397761 TRNP1Q6NT89 227 aa20.47■□□□□ 0.87
PDLIM2-205ENST00000397761 VSTM1Q6UX27 236 aa20.47■□□□□ 0.87
PDLIM2-205ENST00000397761 FIBCD1Q8N539 461 aa20.47■□□□□ 0.87
PDLIM2-205ENST00000397761 ALG3Q92685 438 aa20.47■□□□□ 0.87
PDLIM2-205ENST00000397761 PBKQ96KB5 322 aa20.47■□□□□ 0.87
PDLIM2-205ENST00000397761 LRRC4Q9HBW1 653 aa20.47■□□□□ 0.87
PDLIM2-205ENST00000397761 ASNSD1Q9NWL6 643 aa20.47■□□□□ 0.87
PDLIM2-205ENST00000397761 STK39Q9UEW8 545 aa20.47■□□□□ 0.87
PDLIM2-205ENST00000397761 PCDHA3Q9Y5H8 950 aa20.47■□□□□ 0.87
PDLIM2-205ENST00000397761 DPYSL4O14531 572 aa20.46■□□□□ 0.87
PDLIM2-205ENST00000397761 SPOPO43791 374 aa20.46■□□□□ 0.87
PDLIM2-205ENST00000397761 LCP1P13796 627 aa20.46■□□□□ 0.87
PDLIM2-205ENST00000397761 ATP2A2P16615 1042 aaKnown RBP20.46■□□□□ 0.87
PDLIM2-205ENST00000397761 TKTL1P51854 596 aa20.46■□□□□ 0.87
PDLIM2-205ENST00000397761 ZNF143P52747 638 aaPredicted RBP20.46■□□□□ 0.87
PDLIM2-205ENST00000397761 PRSS55Q6UWB4 352 aaPredicted RBP20.46■□□□□ 0.87
PDLIM2-205ENST00000397761 GPRIN1Q7Z2K8 1008 aa20.46■□□□□ 0.87
PDLIM2-205ENST00000397761 CLEC4CQ8WTT0 213 aa20.46■□□□□ 0.87
PDLIM2-205ENST00000397761 C2orf15Q8WU43 125 aaKnown RBP20.46■□□□□ 0.87
PDLIM2-205ENST00000397761 KRT35Q92764 455 aa20.46■□□□□ 0.87
PDLIM2-205ENST00000397761 DPF3Q92784 378 aa20.46■□□□□ 0.87
PDLIM2-205ENST00000397761 CARD9Q9H257 536 aa20.46■□□□□ 0.87
PDLIM2-205ENST00000397761 CNGB3Q9NQW8 809 aa20.46■□□□□ 0.87
PDLIM2-205ENST00000397761 RNF14Q9UBS8 474 aa20.46■□□□□ 0.87
PDLIM2-205ENST00000397761 PCDHB5Q9Y5E4 795 aa20.46■□□□□ 0.87
PDLIM2-205ENST00000397761 PCDHB12Q9Y5F1 795 aa20.46■□□□□ 0.87
PDLIM2-205ENST00000397761 ZNF185O15231 689 aa20.45■□□□□ 0.86
PDLIM2-205ENST00000397761 VNN2O95498 520 aa20.45■□□□□ 0.86
PDLIM2-205ENST00000397761 GLI1P08151 1106 aa20.45■□□□□ 0.86
PDLIM2-205ENST00000397761 CYP2F1P24903 491 aa20.45■□□□□ 0.86
PDLIM2-205ENST00000397761 CXCR5P32302 372 aa20.45■□□□□ 0.86
PDLIM2-205ENST00000397761 FLT3P36888 993 aa20.45■□□□□ 0.86
PDLIM2-205ENST00000397761 GLUD2P49448 558 aa20.45■□□□□ 0.86
PDLIM2-205ENST00000397761 MRPS5P82675 430 aaKnown RBP20.45■□□□□ 0.86
PDLIM2-205ENST00000397761 TAF5Q15542 800 aa20.45■□□□□ 0.86
PDLIM2-205ENST00000397761 PSMD5Q16401 504 aa20.45■□□□□ 0.86
PDLIM2-205ENST00000397761 EFHC1Q5JVL4 640 aa20.45■□□□□ 0.86
PDLIM2-205ENST00000397761 DCAF12L1Q5VU92 463 aa20.45■□□□□ 0.86
PDLIM2-205ENST00000397761 PM20D1Q6GTS8 502 aa20.45■□□□□ 0.86
PDLIM2-205ENST00000397761 ZNF572Q7Z3I7 529 aaPredicted RBP20.45■□□□□ 0.86
PDLIM2-205ENST00000397761 EMC1Q8N766 993 aa20.45■□□□□ 0.86
PDLIM2-205ENST00000397761 UBL4BQ8N7F7 174 aa20.45■□□□□ 0.86
PDLIM2-205ENST00000397761 FBXO22Q8NEZ5 403 aa20.45■□□□□ 0.86
PDLIM2-205ENST00000397761 RIN2Q8WYP3 895 aaPredicted RBP20.45■□□□□ 0.86
PDLIM2-205ENST00000397761 C8orf48Q96LL4 319 aa20.45■□□□□ 0.86
PDLIM2-205ENST00000397761 CNPY3Q9BT09 278 aa20.45■□□□□ 0.86
PDLIM2-205ENST00000397761 ZBED2Q9BTP6 218 aa20.45■□□□□ 0.86
PDLIM2-205ENST00000397761 USP3Q9Y6I4 520 aa20.45■□□□□ 0.86
PDLIM2-205ENST00000397761 MTCL1Q9Y4B5 1905 aaKnown RBP20.45■□□□□ 0.86
PDLIM2-205ENST00000397761 MTMR11A4FU01 709 aa20.44■□□□□ 0.86
PDLIM2-205ENST00000397761 F8VP50 259 aa20.44■□□□□ 0.86
PDLIM2-205ENST00000397761 KCNK3O14649 394 aa20.44■□□□□ 0.86
PDLIM2-205ENST00000397761 TNFRSF10BO14763 440 aa20.44■□□□□ 0.86
PDLIM2-205ENST00000397761 PSTPIP1O43586 416 aa20.44■□□□□ 0.86
PDLIM2-205ENST00000397761 SLU7O95391 586 aaKnown RBP20.44■□□□□ 0.86
PDLIM2-205ENST00000397761 GPD1P21695 349 aa20.44■□□□□ 0.86
PDLIM2-205ENST00000397761 PSMA2P25787 234 aa20.44■□□□□ 0.86
PDLIM2-205ENST00000397761 MARCKSL1P49006 195 aa20.44■□□□□ 0.86
PDLIM2-205ENST00000397761 CDR1P51861 262 aa20.44■□□□□ 0.86
PDLIM2-205ENST00000397761 LRRC38Q5VT99 294 aa20.44■□□□□ 0.86
PDLIM2-205ENST00000397761 SIX6OS1Q8N1H7 587 aa20.44■□□□□ 0.86
PDLIM2-205ENST00000397761 SPPL2BQ8TCT7 592 aa20.44■□□□□ 0.86
PDLIM2-205ENST00000397761 PSMB7Q99436 277 aa20.44■□□□□ 0.86
PDLIM2-205ENST00000397761 C11orf84Q9BUA3 381 aaPredicted RBP20.44■□□□□ 0.86
PDLIM2-205ENST00000397761 TTC7AQ9ULT0 858 aaPredicted RBP20.44■□□□□ 0.86
PDLIM2-205ENST00000397761 CDY1Q9Y6F8 540 aa20.44■□□□□ 0.86
PDLIM2-205ENST00000397761 SART1O43290 800 aaKnown RBP20.43■□□□□ 0.86
PDLIM2-205ENST00000397761 HSF2BPO75031 334 aa20.43■□□□□ 0.86
PDLIM2-205ENST00000397761 PTPN9P43378 593 aa20.43■□□□□ 0.86
PDLIM2-205ENST00000397761 NDUFV1P49821 464 aa20.43■□□□□ 0.86
PDLIM2-205ENST00000397761 TERF1P54274 439 aa20.43■□□□□ 0.86
PDLIM2-205ENST00000397761 DAOAP59103 153 aa20.43■□□□□ 0.86
PDLIM2-205ENST00000397761 BHLHA9Q7RTU4 235 aa20.43■□□□□ 0.86
PDLIM2-205ENST00000397761 RASGEF1CQ8N431 466 aa20.43■□□□□ 0.86
PDLIM2-205ENST00000397761 ARFGAP1Q8N6T3 406 aa20.43■□□□□ 0.86
PDLIM2-205ENST00000397761 RXFP2Q8WXD0 754 aa20.43■□□□□ 0.86
PDLIM2-205ENST00000397761 IRGQQ8WZA9 623 aa20.43■□□□□ 0.86
PDLIM2-205ENST00000397761 ULBP1Q9BZM6 244 aa20.43■□□□□ 0.86
PDLIM2-205ENST00000397761 ABI2Q9NYB9 513 aaPredicted RBP20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms