RNA–Protein interactions for RNA: ENST00000397643.3

CUX2-202, Transcript of cut like homeobox 2, humanhuman

TSL 1 (best)

Gene CUX2, Length 890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-202ENST00000397643 MYO18AQ92614 2054 aaKnown RBP17.21■□□□□ 0.35
CUX2-202ENST00000397643 A0A0A0MRY4 1105 aa17.21■□□□□ 0.35
CUX2-202ENST00000397643 SPAARA0A1B0GVQ0 90 aa17.21■□□□□ 0.35
CUX2-202ENST00000397643 ZNF840PA6NDX5 716 aa17.21■□□□□ 0.35
CUX2-202ENST00000397643 UPK3BL1B0FP48 263 aa17.21■□□□□ 0.35
CUX2-202ENST00000397643 UPK3BL2E5RIL1 263 aa17.21■□□□□ 0.35
CUX2-202ENST00000397643 SCAMP3O14828 347 aaKnown RBP17.21■□□□□ 0.35
CUX2-202ENST00000397643 ALDH1A2O94788 518 aa17.21■□□□□ 0.35
CUX2-202ENST00000397643 KLF8O95600 359 aaPredicted RBP17.21■□□□□ 0.35
CUX2-202ENST00000397643 LMO2P25791 158 aa17.21■□□□□ 0.35
CUX2-202ENST00000397643 EIF2DP41214 584 aaKnown RBP17.21■□□□□ 0.35
CUX2-202ENST00000397643 PDE6CP51160 858 aa17.21■□□□□ 0.35
CUX2-202ENST00000397643 CASP5P51878 434 aa17.21■□□□□ 0.35
CUX2-202ENST00000397643 SEMA3BQ13214 749 aa17.21■□□□□ 0.35
CUX2-202ENST00000397643 PKP1Q13835 747 aa17.21■□□□□ 0.35
CUX2-202ENST00000397643 ACAP1Q15027 740 aa17.21■□□□□ 0.35
CUX2-202ENST00000397643 L1TD1Q5T7N2 865 aaKnown RBP17.21■□□□□ 0.35
CUX2-202ENST00000397643 FOXD4L5Q5VV16 416 aaPredicted RBP17.21■□□□□ 0.35
CUX2-202ENST00000397643 SLC23A3Q6PIS1 610 aa17.21■□□□□ 0.35
CUX2-202ENST00000397643 C4orf50Q6ZRC1 276 aa17.21■□□□□ 0.35
CUX2-202ENST00000397643 DYMQ7RTS9 669 aa17.21■□□□□ 0.35
CUX2-202ENST00000397643 PHTF2Q8N3S3 785 aa17.21■□□□□ 0.35
CUX2-202ENST00000397643 KRI1Q8N9T8 703 aaKnown RBP17.21■□□□□ 0.35
CUX2-202ENST00000397643 WHAMMQ8TF30 809 aa17.21■□□□□ 0.35
CUX2-202ENST00000397643 FOXD4L4Q8WXT5 416 aaPredicted RBP17.21■□□□□ 0.35
CUX2-202ENST00000397643 CEP295NLQ96MC4 621 aa17.21■□□□□ 0.35
CUX2-202ENST00000397643 SYT15Q9BQS2 421 aa17.21■□□□□ 0.35
CUX2-202ENST00000397643 NUSAP1Q9BXS6 441 aaKnown RBP17.21■□□□□ 0.35
CUX2-202ENST00000397643 ZDHHC4Q9NPG8 344 aa17.21■□□□□ 0.35
CUX2-202ENST00000397643 PILRBQ9UKJ0 227 aa17.21■□□□□ 0.35
CUX2-202ENST00000397643 CPQQ9Y646 472 aa17.21■□□□□ 0.35
CUX2-202ENST00000397643 PTPRJQ12913 1337 aa17.21■□□□□ 0.34
CUX2-202ENST00000397643 KAT7O95251 611 aa17.2■□□□□ 0.34
CUX2-202ENST00000397643 F13A1P00488 732 aa17.2■□□□□ 0.34
CUX2-202ENST00000397643 OAS1P00973 400 aaKnown RBP17.2■□□□□ 0.34
CUX2-202ENST00000397643 CAPNS1P04632 268 aa17.2■□□□□ 0.34
CUX2-202ENST00000397643 KRT19P08727 400 aa17.2■□□□□ 0.34
CUX2-202ENST00000397643 GARTP22102 1010 aa17.2■□□□□ 0.34
CUX2-202ENST00000397643 BDNFP23560 247 aa17.2■□□□□ 0.34
CUX2-202ENST00000397643 TIE1P35590 1138 aa17.2■□□□□ 0.34
CUX2-202ENST00000397643 RBP5P82980 135 aa17.2■□□□□ 0.34
CUX2-202ENST00000397643 HSF5Q4G112 596 aaPredicted RBP17.2■□□□□ 0.34
CUX2-202ENST00000397643 SPDYCQ5MJ68 293 aa17.2■□□□□ 0.34
CUX2-202ENST00000397643 EMC10Q5UCC4 262 aa17.2■□□□□ 0.34
CUX2-202ENST00000397643 RHBDF2Q6PJF5 856 aa17.2■□□□□ 0.34
CUX2-202ENST00000397643 LRSAM1Q6UWE0 723 aa17.2■□□□□ 0.34
CUX2-202ENST00000397643 DENND5BQ6ZUT9 1274 aa17.2■□□□□ 0.34
CUX2-202ENST00000397643 USP49Q70CQ1 688 aa17.2■□□□□ 0.34
CUX2-202ENST00000397643 RASSF8Q8NHQ8 419 aa17.2■□□□□ 0.34
CUX2-202ENST00000397643 CACTINQ8WUQ7 758 aaKnown RBP17.2■□□□□ 0.34
CUX2-202ENST00000397643 DNAJC19Q96DA6 116 aa17.2■□□□□ 0.34
CUX2-202ENST00000397643 SPACA7Q96KW9 195 aa17.2■□□□□ 0.34
CUX2-202ENST00000397643 PNKPQ96T60 521 aa17.2■□□□□ 0.34
CUX2-202ENST00000397643 CBWD1Q9BRT8 395 aa17.2■□□□□ 0.34
CUX2-202ENST00000397643 SLC32A1Q9H598 525 aa17.2■□□□□ 0.34
CUX2-202ENST00000397643 PDE11AQ9HCR9 933 aa17.2■□□□□ 0.34
CUX2-202ENST00000397643 FSCN3Q9NQT6 498 aa17.2■□□□□ 0.34
CUX2-202ENST00000397643 TMEM30AQ9NV96 361 aa17.2■□□□□ 0.34
CUX2-202ENST00000397643 TRPM5Q9NZQ8 1165 aa17.2■□□□□ 0.34
CUX2-202ENST00000397643 CHMP5Q9NZZ3 219 aa17.2■□□□□ 0.34
CUX2-202ENST00000397643 MAGEC2Q9UBF1 373 aaPredicted RBP17.2■□□□□ 0.34
CUX2-202ENST00000397643 SEL1LQ9UBV2 794 aa17.2■□□□□ 0.34
CUX2-202ENST00000397643 CDH9Q9ULB4 789 aa17.2■□□□□ 0.34
CUX2-202ENST00000397643 NME7Q9Y5B8 376 aa17.2■□□□□ 0.34
CUX2-202ENST00000397643 GOLGA8IPA6NC78 632 aa17.19■□□□□ 0.34
CUX2-202ENST00000397643 MYMKA6NI61 221 aa17.19■□□□□ 0.34
CUX2-202ENST00000397643 GOLGA8JA6NMD2 632 aa17.19■□□□□ 0.34
CUX2-202ENST00000397643 ITPKAP23677 461 aa17.19■□□□□ 0.34
CUX2-202ENST00000397643 SIM1P81133 766 aaPredicted RBP17.19■□□□□ 0.34
CUX2-202ENST00000397643 LYSMD4Q5XG99 296 aa17.19■□□□□ 0.34
CUX2-202ENST00000397643 LMBRD2Q68DH5 695 aaPredicted RBP17.19■□□□□ 0.34
CUX2-202ENST00000397643 DPH6Q7L8W6 267 aa17.19■□□□□ 0.34
CUX2-202ENST00000397643 HMGB4Q8WW32 186 aa17.19■□□□□ 0.34
CUX2-202ENST00000397643 PCED1BQ96HM7 432 aa17.19■□□□□ 0.34
CUX2-202ENST00000397643 ACCSQ96QU6 501 aa17.19■□□□□ 0.34
CUX2-202ENST00000397643 FGFBP2Q9BYJ0 223 aa17.19■□□□□ 0.34
CUX2-202ENST00000397643 MRPL44Q9H9J2 332 aaKnown RBP17.19■□□□□ 0.34
CUX2-202ENST00000397643 SMPD4Q9NXE4 827 aa17.19■□□□□ 0.34
CUX2-202ENST00000397643 TBC1D7Q9P0N9 293 aa17.19■□□□□ 0.34
CUX2-202ENST00000397643 LHX6Q9UPM6 363 aa17.19■□□□□ 0.34
CUX2-202ENST00000397643 EXOC7Q9UPT5 735 aa17.19■□□□□ 0.34
CUX2-202ENST00000397643 ADAMTS9Q9P2N4 1935 aa17.19■□□□□ 0.34
CUX2-202ENST00000397643 FAM221BA6H8Z2 402 aa17.18■□□□□ 0.34
CUX2-202ENST00000397643 TAF4O00268 1085 aa17.18■□□□□ 0.34
CUX2-202ENST00000397643 LDHAP00338 332 aaKnown RBP17.18■□□□□ 0.34
CUX2-202ENST00000397643 HOXD12P35452 270 aa17.18■□□□□ 0.34
CUX2-202ENST00000397643 GRIK1P39086 918 aa17.18■□□□□ 0.34
CUX2-202ENST00000397643 FAM193AP78312 1265 aa17.18■□□□□ 0.34
CUX2-202ENST00000397643 NOP14P78316 857 aaKnown RBP17.18■□□□□ 0.34
CUX2-202ENST00000397643 KDSRQ06136 332 aa17.18■□□□□ 0.34
CUX2-202ENST00000397643 EOGTQ5NDL2 527 aa17.18■□□□□ 0.34
CUX2-202ENST00000397643 OR5B17Q8NGF7 314 aa17.18■□□□□ 0.34
CUX2-202ENST00000397643 EPSTI1Q96J88 318 aa17.18■□□□□ 0.34
CUX2-202ENST00000397643 CAPN10Q9HC96 672 aa17.18■□□□□ 0.34
CUX2-202ENST00000397643 POLMQ9NP87 494 aaPredicted RBP17.18■□□□□ 0.34
CUX2-202ENST00000397643 ARHGEF4Q9NR80 690 aa17.18■□□□□ 0.34
CUX2-202ENST00000397643 OLFML3Q9NRN5 406 aa17.18■□□□□ 0.34
CUX2-202ENST00000397643 CFAP97Q9P2B7 532 aa17.18■□□□□ 0.34
CUX2-202ENST00000397643 ZDHHC9Q9Y397 364 aa17.18■□□□□ 0.34
CUX2-202ENST00000397643 ATP6V1DQ9Y5K8 247 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms