RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 SRRDQ9UH36 339 aa6.13□□□□□ -1.43
PTPRD-206ENST00000397617 NFU1Q9UMS0 254 aa6.13□□□□□ -1.43
PTPRD-206ENST00000397617 TTC28Q96AY4 2481 aa6.13□□□□□ -1.43
PTPRD-206ENST00000397617 HMGB3O15347 200 aaKnown RBP6.13□□□□□ -1.43
PTPRD-206ENST00000397617 GPD1P21695 349 aa6.13□□□□□ -1.43
PTPRD-206ENST00000397617 MRPS6P82932 125 aaKnown RBP6.13□□□□□ -1.43
PTPRD-206ENST00000397617 NOMO1Q15155 1222 aa6.13□□□□□ -1.43
PTPRD-206ENST00000397617 SLC25A52Q3SY17 297 aa6.13□□□□□ -1.43
PTPRD-206ENST00000397617 RALGPS1Q5JS13 557 aa6.13□□□□□ -1.43
PTPRD-206ENST00000397617 HIBCHQ6NVY1 386 aaPredicted RBP6.13□□□□□ -1.43
PTPRD-206ENST00000397617 SLAIN1Q8ND83 568 aa6.13□□□□□ -1.43
PTPRD-206ENST00000397617 NPY6RQ99463 290 aa6.13□□□□□ -1.43
PTPRD-206ENST00000397617 CAPS2Q9BXY5 557 aa6.13□□□□□ -1.43
PTPRD-206ENST00000397617 ASIC3Q9UHC3 531 aa6.13□□□□□ -1.43
PTPRD-206ENST00000397617 ZHX1Q9UKY1 873 aaPredicted RBP6.13□□□□□ -1.43
PTPRD-206ENST00000397617 AKT3Q9Y243 479 aa6.13□□□□□ -1.43
PTPRD-206ENST00000397617 RGS16O15492 202 aaPredicted RBP6.13□□□□□ -1.43
PTPRD-206ENST00000397617 PRPSAP2O60256 369 aa6.13□□□□□ -1.43
PTPRD-206ENST00000397617 DAB1O75553 588 aa6.13□□□□□ -1.43
PTPRD-206ENST00000397617 SLC26A3P40879 764 aa6.13□□□□□ -1.43
PTPRD-206ENST00000397617 PPP2R2AP63151 447 aa6.13□□□□□ -1.43
PTPRD-206ENST00000397617 INSCQ1MX18 579 aa6.13□□□□□ -1.43
PTPRD-206ENST00000397617 PM20D1Q6GTS8 502 aa6.13□□□□□ -1.43
PTPRD-206ENST00000397617 C4orf50Q6ZRC1 276 aa6.13□□□□□ -1.43
PTPRD-206ENST00000397617 TATDN2Q93075 761 aa6.13□□□□□ -1.43
PTPRD-206ENST00000397617 DUSP16Q9BY84 665 aa6.13□□□□□ -1.43
PTPRD-206ENST00000397617 KLC2Q9H0B6 622 aa6.13□□□□□ -1.43
PTPRD-206ENST00000397617 KRT38O76015 456 aa6.13□□□□□ -1.43
PTPRD-206ENST00000397617 OAZ2O95190 189 aa6.13□□□□□ -1.43
PTPRD-206ENST00000397617 HOXC13P31276 330 aa6.13□□□□□ -1.43
PTPRD-206ENST00000397617 L1CAMP32004 1257 aa6.13□□□□□ -1.43
PTPRD-206ENST00000397617 IFFO1Q0D2I5 559 aa6.13□□□□□ -1.43
PTPRD-206ENST00000397617 PPP1R7Q15435 360 aa6.13□□□□□ -1.43
PTPRD-206ENST00000397617 ITPRIPL1Q6GPH6 555 aa6.13□□□□□ -1.43
PTPRD-206ENST00000397617 METTL3Q86U44 580 aaKnown RBP6.13□□□□□ -1.43
PTPRD-206ENST00000397617 RASAL3Q86YV0 1011 aa6.13□□□□□ -1.43
PTPRD-206ENST00000397617 CABS1Q96KC9 395 aa6.13□□□□□ -1.43
PTPRD-206ENST00000397617 VPS11Q9H270 941 aa6.13□□□□□ -1.43
PTPRD-206ENST00000397617 TM9SF1O15321 606 aa6.13□□□□□ -1.43
PTPRD-206ENST00000397617 LIASO43766 372 aa6.13□□□□□ -1.43
PTPRD-206ENST00000397617 LATS1O95835 1130 aa6.13□□□□□ -1.43
PTPRD-206ENST00000397617 NPR3P17342 541 aa6.13□□□□□ -1.43
PTPRD-206ENST00000397617 DSC3Q14574 896 aa6.13□□□□□ -1.43
PTPRD-206ENST00000397617 C9orf57Q5W0N0 161 aa6.13□□□□□ -1.43
PTPRD-206ENST00000397617 CHSY1Q86X52 802 aa6.13□□□□□ -1.43
PTPRD-206ENST00000397617 PKD2L1Q9P0L9 805 aa6.13□□□□□ -1.43
PTPRD-206ENST00000397617 ATP8A1Q9Y2Q0 1164 aa6.13□□□□□ -1.43
PTPRD-206ENST00000397617 TLL2Q9Y6L7 1015 aa6.13□□□□□ -1.43
PTPRD-206ENST00000397617 CACNA1HO95180 2353 aa6.13□□□□□ -1.43
PTPRD-206ENST00000397617 ADAMTS4O75173 837 aa6.13□□□□□ -1.43
PTPRD-206ENST00000397617 GCATO75600 419 aa6.13□□□□□ -1.43
PTPRD-206ENST00000397617 RECQL4O94761 1208 aa6.13□□□□□ -1.43
PTPRD-206ENST00000397617 ABL1P00519 1130 aa6.13□□□□□ -1.43
PTPRD-206ENST00000397617 SRGAP2CP0DJJ0 459 aa6.13□□□□□ -1.43
PTPRD-206ENST00000397617 SH2D4BQ5SQS7 431 aa6.13□□□□□ -1.43
PTPRD-206ENST00000397617 SPOCD1Q6ZMY3 1216 aa6.13□□□□□ -1.43
PTPRD-206ENST00000397617 SPPL2BQ8TCT7 592 aa6.13□□□□□ -1.43
PTPRD-206ENST00000397617 FAM204AQ9H8W3 233 aa6.13□□□□□ -1.43
PTPRD-206ENST00000397617 AGAP1Q9UPQ3 857 aa6.13□□□□□ -1.43
PTPRD-206ENST00000397617 SMIM10L2AP0DMW4 78 aa6.12□□□□□ -1.43
PTPRD-206ENST00000397617 SMIM10L2BP0DMW5 78 aa6.12□□□□□ -1.43
PTPRD-206ENST00000397617 ALDH3A1P30838 453 aa6.12□□□□□ -1.43
PTPRD-206ENST00000397617 FLT3P36888 993 aa6.12□□□□□ -1.43
PTPRD-206ENST00000397617 BCAR1P56945 870 aa6.12□□□□□ -1.43
PTPRD-206ENST00000397617 YBEYP58557 167 aaPredicted RBP6.12□□□□□ -1.43
PTPRD-206ENST00000397617 ERMARDQ5T6L9 678 aa6.12□□□□□ -1.43
PTPRD-206ENST00000397617 ZDHHC24Q6UX98 284 aa6.12□□□□□ -1.43
PTPRD-206ENST00000397617 FAM212AQ96EL1 285 aa6.12□□□□□ -1.43
PTPRD-206ENST00000397617 FBXO44Q9H4M3 255 aa6.12□□□□□ -1.43
PTPRD-206ENST00000397617 OLA1Q9NTK5 396 aaKnown RBP6.12□□□□□ -1.43
PTPRD-206ENST00000397617 TMEM161AQ9NX61 479 aa6.12□□□□□ -1.43
PTPRD-206ENST00000397617 TPX2Q9ULW0 747 aaKnown RBP6.12□□□□□ -1.43
PTPRD-206ENST00000397617 H3BQF6 201 aa6.12□□□□□ -1.43
PTPRD-206ENST00000397617 PRPF4O43172 522 aaKnown RBP eCLIP6.12□□□□□ -1.43
PTPRD-206ENST00000397617 THP07101 528 aa6.12□□□□□ -1.43
PTPRD-206ENST00000397617 KDELR1P24390 212 aa6.12□□□□□ -1.43
PTPRD-206ENST00000397617 IGBP1P78318 339 aa6.12□□□□□ -1.43
PTPRD-206ENST00000397617 COG7P83436 770 aa6.12□□□□□ -1.43
PTPRD-206ENST00000397617 SLC25A11Q02978 314 aaKnown RBP6.12□□□□□ -1.43
PTPRD-206ENST00000397617 DSC1Q08554 894 aa6.12□□□□□ -1.43
PTPRD-206ENST00000397617 ZSCAN26Q16670 478 aa6.12□□□□□ -1.43
PTPRD-206ENST00000397617 MSANTD2Q6P1R3 559 aa6.12□□□□□ -1.43
PTPRD-206ENST00000397617 ZNF598Q86UK7 904 aaKnown RBP6.12□□□□□ -1.43
PTPRD-206ENST00000397617 NLRP7Q8WX94 980 aa6.12□□□□□ -1.43
PTPRD-206ENST00000397617 CASKIN2Q8WXE0 1202 aa6.12□□□□□ -1.43
PTPRD-206ENST00000397617 SENP6Q9GZR1 1112 aaPredicted RBP6.12□□□□□ -1.43
PTPRD-206ENST00000397617 SEPT11Q9NVA2 429 aaKnown RBP6.12□□□□□ -1.43
PTPRD-206ENST00000397617 RFC2P35250 354 aa6.12□□□□□ -1.43
PTPRD-206ENST00000397617 ARL4AP40617 200 aa6.12□□□□□ -1.43
PTPRD-206ENST00000397617 PPP3CCP48454 512 aa6.12□□□□□ -1.43
PTPRD-206ENST00000397617 PMS2P54278 862 aa6.12□□□□□ -1.43
PTPRD-206ENST00000397617 SEMA3BQ13214 749 aa6.12□□□□□ -1.43
PTPRD-206ENST00000397617 VARS2Q5ST30 1063 aaKnown RBP6.12□□□□□ -1.43
PTPRD-206ENST00000397617 RNASEH2BQ5TBB1 312 aaKnown RBP6.12□□□□□ -1.43
PTPRD-206ENST00000397617 GALNT7Q86SF2 657 aa6.12□□□□□ -1.43
PTPRD-206ENST00000397617 RNF157Q96PX1 679 aa6.12□□□□□ -1.43
PTPRD-206ENST00000397617 HAPLN3Q96S86 360 aa6.12□□□□□ -1.43
PTPRD-206ENST00000397617 PRKD2Q9BZL6 878 aa6.12□□□□□ -1.43
PTPRD-206ENST00000397617 ARHGAP39Q9C0H5 1083 aa6.12□□□□□ -1.43
PTPRD-206ENST00000397617 EPN3Q9H201 632 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms