RNA–Protein interactions for RNA: ENST00000397276.6

PABPN1-202, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PABPN1, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-202ENST00000397276 RPL22P35268 128 aaKnown RBP24.87■■□□□ 1.57
PABPN1-202ENST00000397276 POU5F1BQ06416 359 aa24.87■■□□□ 1.57
PABPN1-202ENST00000397276 GLRA4Q5JXX5 417 aa24.87■■□□□ 1.57
PABPN1-202ENST00000397276 FNBP1LQ5T0N5 605 aa24.87■■□□□ 1.57
PABPN1-202ENST00000397276 MARCH8Q5T0T0 291 aa24.87■■□□□ 1.57
PABPN1-202ENST00000397276 SCYL2Q6P3W7 929 aa24.87■■□□□ 1.57
PABPN1-202ENST00000397276 FAM183BPQ6ZVS7 135 aa24.87■■□□□ 1.57
PABPN1-202ENST00000397276 RXFP2Q8WXD0 754 aa24.87■■□□□ 1.57
PABPN1-202ENST00000397276 LPIN3Q9BQK8 851 aa24.87■■□□□ 1.57
PABPN1-202ENST00000397276 CYP3A43Q9HB55 503 aa24.87■■□□□ 1.57
PABPN1-202ENST00000397276 SPON1Q9HCB6 807 aa24.87■■□□□ 1.57
PABPN1-202ENST00000397276 NKIRAS1Q9NYS0 192 aa24.87■■□□□ 1.57
PABPN1-202ENST00000397276 C15orf41Q9Y2V0 281 aa24.87■■□□□ 1.57
PABPN1-202ENST00000397276 SNX9Q9Y5X1 595 aa24.87■■□□□ 1.57
PABPN1-202ENST00000397276 HMGCRP04035 888 aa24.86■■□□□ 1.57
PABPN1-202ENST00000397276 KRT16P08779 473 aa24.86■■□□□ 1.57
PABPN1-202ENST00000397276 CDH6P55285 790 aa24.86■■□□□ 1.57
PABPN1-202ENST00000397276 EIF3EP60228 445 aaKnown RBP24.86■■□□□ 1.57
PABPN1-202ENST00000397276 HIF1AQ16665 826 aa24.86■■□□□ 1.57
PABPN1-202ENST00000397276 MSS51Q4VC12 460 aa24.86■■□□□ 1.57
PABPN1-202ENST00000397276 C4orf33Q8N1A6 199 aa24.86■■□□□ 1.57
PABPN1-202ENST00000397276 CPT1BQ92523 772 aa24.86■■□□□ 1.57
PABPN1-202ENST00000397276 MAML1Q92585 1016 aa24.86■■□□□ 1.57
PABPN1-202ENST00000397276 RSRC1Q96IZ7 334 aaKnown RBP24.86■■□□□ 1.57
PABPN1-202ENST00000397276 FOXP3Q9BZS1 431 aa24.86■■□□□ 1.57
PABPN1-202ENST00000397276 SNTG2Q9NY99 539 aa24.86■■□□□ 1.57
PABPN1-202ENST00000397276 DIAPH2O60879 1101 aa24.86■■□□□ 1.57
PABPN1-202ENST00000397276 MAP3K6O95382 1288 aa24.86■■□□□ 1.57
PABPN1-202ENST00000397276 NPTXRO95502 500 aa24.86■■□□□ 1.57
PABPN1-202ENST00000397276 SSTR1P30872 391 aa24.86■■□□□ 1.57
PABPN1-202ENST00000397276 PKN2Q16513 984 aaKnown RBP24.86■■□□□ 1.57
PABPN1-202ENST00000397276 ACOT1Q86TX2 421 aa24.86■■□□□ 1.57
PABPN1-202ENST00000397276 SPATA18Q8TC71 538 aa24.86■■□□□ 1.57
PABPN1-202ENST00000397276 L3MBTL3Q96JM7 780 aaPredicted RBP24.86■■□□□ 1.57
PABPN1-202ENST00000397276 TGS1Q96RS0 853 aaKnown RBP24.86■■□□□ 1.57
PABPN1-202ENST00000397276 VTA1Q9NP79 307 aa24.86■■□□□ 1.57
PABPN1-202ENST00000397276 ASNSD1Q9NWL6 643 aa24.86■■□□□ 1.57
PABPN1-202ENST00000397276 EURLQ9NYK6 297 aa24.86■■□□□ 1.57
PABPN1-202ENST00000397276 DNAH12Q6ZR08 3092 aa24.86■■□□□ 1.57
PABPN1-202ENST00000397276 EIF4E1BA6NMX2 242 aaKnown RBP24.85■■□□□ 1.57
PABPN1-202ENST00000397276 BTBD19C9JJ37 291 aa24.85■■□□□ 1.57
PABPN1-202ENST00000397276 RBP3P10745 1247 aa24.85■■□□□ 1.57
PABPN1-202ENST00000397276 SMPD1P17405 629 aa24.85■■□□□ 1.57
PABPN1-202ENST00000397276 CKAP2Q8WWK9 683 aa24.85■■□□□ 1.57
PABPN1-202ENST00000397276 ZNF570Q96NI8 536 aa24.85■■□□□ 1.57
PABPN1-202ENST00000397276 NT5C1AQ9BXI3 368 aa24.85■■□□□ 1.57
PABPN1-202ENST00000397276 MAK16Q9BXY0 300 aaKnown RBP24.85■■□□□ 1.57
PABPN1-202ENST00000397276 CLEC11AQ9Y240 323 aa24.85■■□□□ 1.57
PABPN1-202ENST00000397276 ALOX15BO15296 676 aa24.85■■□□□ 1.57
PABPN1-202ENST00000397276 GABRB2P47870 512 aa24.85■■□□□ 1.57
PABPN1-202ENST00000397276 BASP1P80723 227 aaKnown RBP24.85■■□□□ 1.57
PABPN1-202ENST00000397276 LDLRAD1Q5T700 205 aa24.85■■□□□ 1.57
PABPN1-202ENST00000397276 PPP1R26Q5T8A7 1209 aaPredicted RBP24.85■■□□□ 1.57
PABPN1-202ENST00000397276 LRRN4Q8WUT4 740 aa24.85■■□□□ 1.57
PABPN1-202ENST00000397276 MRPL45Q9BRJ2 306 aaKnown RBP24.85■■□□□ 1.57
PABPN1-202ENST00000397276 GPATCH2LQ9NWQ4 482 aa24.85■■□□□ 1.57
PABPN1-202ENST00000397276 ITGA11Q9UKX5 1188 aa24.85■■□□□ 1.57
PABPN1-202ENST00000397276 ABHD2P08910 425 aa24.84■■□□□ 1.57
PABPN1-202ENST00000397276 EFTUD2Q15029 972 aaKnown RBP eCLIP24.84■■□□□ 1.572e-7■■■□□ 19.1
PABPN1-202ENST00000397276 GOLGA7BQ2TAP0 167 aa24.84■■□□□ 1.57
PABPN1-202ENST00000397276 CEP128Q6ZU80 1094 aa24.84■■□□□ 1.57
PABPN1-202ENST00000397276 IFNLR1Q8IU57 520 aaPredicted RBP24.84■■□□□ 1.57
PABPN1-202ENST00000397276 CMASQ8NFW8 434 aaPredicted RBP24.84■■□□□ 1.57
PABPN1-202ENST00000397276 ZMAT2Q96NC0 199 aaKnown RBP24.84■■□□□ 1.57
PABPN1-202ENST00000397276 TTC25Q96NG3 672 aa24.84■■□□□ 1.57
PABPN1-202ENST00000397276 APOL6Q9BWW8 343 aa24.84■■□□□ 1.57
PABPN1-202ENST00000397276 VRTNQ9H8Y1 702 aa24.84■■□□□ 1.57
PABPN1-202ENST00000397276 CDHR5Q9HBB8 845 aa24.84■■□□□ 1.57
PABPN1-202ENST00000397276 SHOC2Q9UQ13 582 aa24.84■■□□□ 1.57
PABPN1-202ENST00000397276 GPD1P21695 349 aa24.84■■□□□ 1.57
PABPN1-202ENST00000397276 C1orf228Q6PIY5 440 aa24.84■■□□□ 1.57
PABPN1-202ENST00000397276 ARHGEF18Q6ZSZ5 1173 aa24.84■■□□□ 1.57
PABPN1-202ENST00000397276 SCUBE3Q8IX30 993 aa24.84■■□□□ 1.57
PABPN1-202ENST00000397276 TTC13Q8NBP0 860 aa24.84■■□□□ 1.57
PABPN1-202ENST00000397276 ZC3H15Q8WU90 426 aaKnown RBP24.84■■□□□ 1.57
PABPN1-202ENST00000397276 FARP1Q9Y4F1 1045 aaPredicted RBP24.84■■□□□ 1.57
PABPN1-202ENST00000397276 HCRTO43612 131 aa24.83■■□□□ 1.57
PABPN1-202ENST00000397276 ZNF143P52747 638 aaPredicted RBP24.83■■□□□ 1.57
PABPN1-202ENST00000397276 GPX6P59796 221 aa24.83■■□□□ 1.57
PABPN1-202ENST00000397276 RIPK1Q13546 671 aa24.83■■□□□ 1.57
PABPN1-202ENST00000397276 PMF1Q6P1K2 205 aa24.83■■□□□ 1.57
PABPN1-202ENST00000397276 PYROXD1Q8WU10 500 aa24.83■■□□□ 1.57
PABPN1-202ENST00000397276 TRIM6Q9C030 488 aaPredicted RBP24.83■■□□□ 1.57
PABPN1-202ENST00000397276 KATNBL1Q9H079 304 aa24.83■■□□□ 1.57
PABPN1-202ENST00000397276 USP15Q9Y4E8 981 aaPredicted RBP24.83■■□□□ 1.57
PABPN1-202ENST00000397276 CCL15-CCL14A0A0B4J2E2 113 aa24.83■■□□□ 1.57
PABPN1-202ENST00000397276 PFKMP08237 780 aa24.83■■□□□ 1.57
PABPN1-202ENST00000397276 CCL15Q16663 113 aa24.83■■□□□ 1.57
PABPN1-202ENST00000397276 FAM47EQ6ZV65 393 aa24.83■■□□□ 1.57
PABPN1-202ENST00000397276 PPIL6Q8IXY8 311 aa24.83■■□□□ 1.57
PABPN1-202ENST00000397276 EIF2AQ9BY44 585 aaKnown RBP24.83■■□□□ 1.57
PABPN1-202ENST00000397276 NGRNQ9NPE2 291 aaKnown RBP24.83■■□□□ 1.57
PABPN1-202ENST00000397276 EFR3BQ9Y2G0 817 aa24.83■■□□□ 1.57
PABPN1-202ENST00000397276 C2CD2Q9Y426 696 aa24.83■■□□□ 1.57
PABPN1-202ENST00000397276 OAS1P00973 400 aaKnown RBP24.82■■□□□ 1.56
PABPN1-202ENST00000397276 BBS9Q3SYG4 887 aa24.82■■□□□ 1.56
PABPN1-202ENST00000397276 DARS2Q6PI48 645 aaKnown RBP24.82■■□□□ 1.56
PABPN1-202ENST00000397276 TRABD2AQ86V40 505 aa24.82■■□□□ 1.56
PABPN1-202ENST00000397276 OR6J1Q8NGC5 347 aa24.82■■□□□ 1.56
PABPN1-202ENST00000397276 C18orf25Q96B23 403 aaPredicted RBP24.82■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms