RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 RAD51CO43502 376 aa15.71■□□□□ 0.11
CAPN3-207ENST00000397200 MED7O43513 233 aa15.71■□□□□ 0.11
CAPN3-207ENST00000397200 CTSAP10619 480 aa15.71■□□□□ 0.11
CAPN3-207ENST00000397200 BRD2P25440 801 aaKnown RBP15.71■□□□□ 0.11
CAPN3-207ENST00000397200 CTNNA2P26232 953 aa15.71■□□□□ 0.11
CAPN3-207ENST00000397200 CA8P35219 290 aa15.71■□□□□ 0.11
CAPN3-207ENST00000397200 GPM6BQ13491 265 aa15.71■□□□□ 0.11
CAPN3-207ENST00000397200 PTPROQ16827 1216 aa15.71■□□□□ 0.11
CAPN3-207ENST00000397200 MDH1BQ5I0G3 518 aa15.71■□□□□ 0.11
CAPN3-207ENST00000397200 TMC7Q7Z402 723 aa15.71■□□□□ 0.11
CAPN3-207ENST00000397200 GPR65Q8IYL9 337 aa15.71■□□□□ 0.11
CAPN3-207ENST00000397200 DCP1BQ8IZD4 617 aaKnown RBP15.71■□□□□ 0.11
CAPN3-207ENST00000397200 C12orf29Q8N999 325 aa15.71■□□□□ 0.11
CAPN3-207ENST00000397200 ZNF564Q8TBZ8 553 aaPredicted RBP15.71■□□□□ 0.11
CAPN3-207ENST00000397200 ZNF606Q8WXB4 792 aa15.71■□□□□ 0.11
CAPN3-207ENST00000397200 ARNTL2Q8WYA1 636 aa15.71■□□□□ 0.11
CAPN3-207ENST00000397200 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.71■□□□□ 0.11
CAPN3-207ENST00000397200 ZNF653Q96CK0 615 aa15.71■□□□□ 0.11
CAPN3-207ENST00000397200 TRIM11Q96F44 468 aa15.71■□□□□ 0.11
CAPN3-207ENST00000397200 LPIN3Q9BQK8 851 aa15.71■□□□□ 0.11
CAPN3-207ENST00000397200 ZSWIM1Q9BR11 485 aa15.71■□□□□ 0.11
CAPN3-207ENST00000397200 MED4Q9NPJ6 270 aa15.71■□□□□ 0.11
CAPN3-207ENST00000397200 CRTAC1Q9NQ79 661 aa15.71■□□□□ 0.11
CAPN3-207ENST00000397200 ENTPD7Q9NQZ7 604 aa15.71■□□□□ 0.11
CAPN3-207ENST00000397200 FAM49BQ9NUQ9 324 aa15.71■□□□□ 0.11
CAPN3-207ENST00000397200 BACE2Q9Y5Z0 518 aa15.71■□□□□ 0.11
CAPN3-207ENST00000397200 MYBPHLA2RUH7 354 aa15.7■□□□□ 0.1
CAPN3-207ENST00000397200 TBC1D4O60343 1298 aa15.7■□□□□ 0.1
CAPN3-207ENST00000397200 MYBL1P10243 752 aa15.7■□□□□ 0.1
CAPN3-207ENST00000397200 CREMQ03060 361 aa15.7■□□□□ 0.1
CAPN3-207ENST00000397200 TERF2Q15554 542 aa15.7■□□□□ 0.1
CAPN3-207ENST00000397200 MAPRE1Q15691 268 aaKnown RBP15.7■□□□□ 0.1
CAPN3-207ENST00000397200 LRIT3Q3SXY7 679 aa15.7■□□□□ 0.1
CAPN3-207ENST00000397200 PPP1R2P3Q6NXS1 205 aa15.7■□□□□ 0.1
CAPN3-207ENST00000397200 MYCBPAPQ8TBZ2 947 aa15.7■□□□□ 0.1
CAPN3-207ENST00000397200 AUTS2Q8WXX7 1259 aa15.7■□□□□ 0.1
CAPN3-207ENST00000397200 TFAP2BQ92481 460 aa15.7■□□□□ 0.1
CAPN3-207ENST00000397200 ALG3Q92685 438 aa15.7■□□□□ 0.1
CAPN3-207ENST00000397200 TMEM209Q96SK2 561 aa15.7■□□□□ 0.1
CAPN3-207ENST00000397200 TCF25Q9BQ70 676 aa15.7■□□□□ 0.1
CAPN3-207ENST00000397200 NUP85Q9BW27 656 aa15.7■□□□□ 0.1
CAPN3-207ENST00000397200 ZCWPW1Q9H0M4 648 aa15.7■□□□□ 0.1
CAPN3-207ENST00000397200 TLR9Q9NR96 1032 aa15.7■□□□□ 0.1
CAPN3-207ENST00000397200 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.7■□□□□ 0.1
CAPN3-207ENST00000397200 CDY1Q9Y6F8 540 aa15.7■□□□□ 0.1
CAPN3-207ENST00000397200 GRM6O15303 877 aa15.69■□□□□ 0.1
CAPN3-207ENST00000397200 OR4Q2P0C623 313 aa15.69■□□□□ 0.1
CAPN3-207ENST00000397200 CPB1P15086 417 aa15.69■□□□□ 0.1
CAPN3-207ENST00000397200 PEX5P50542 639 aa15.69■□□□□ 0.1
CAPN3-207ENST00000397200 ARPP19P56211 112 aa15.69■□□□□ 0.1
CAPN3-207ENST00000397200 STILQ15468 1287 aa15.69■□□□□ 0.1
CAPN3-207ENST00000397200 PPP2R5EQ16537 467 aa15.69■□□□□ 0.1
CAPN3-207ENST00000397200 SLC39A12Q504Y0 691 aa15.69■□□□□ 0.1
CAPN3-207ENST00000397200 PRPF38BQ5VTL8 546 aaKnown RBP15.69■□□□□ 0.1
CAPN3-207ENST00000397200 FAM171BQ6P995 826 aa15.69■□□□□ 0.1
CAPN3-207ENST00000397200 MON1BQ7L1V2 547 aa15.69■□□□□ 0.1
CAPN3-207ENST00000397200 MCOLN2Q8IZK6 566 aa15.69■□□□□ 0.1
CAPN3-207ENST00000397200 SEC14L1Q92503 715 aa15.69■□□□□ 0.1
CAPN3-207ENST00000397200 CYFIP2Q96F07 1278 aa15.69■□□□□ 0.1
CAPN3-207ENST00000397200 NAP1L3Q99457 506 aaPredicted RBP15.69■□□□□ 0.1
CAPN3-207ENST00000397200 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.68■□□□□ 0.1
CAPN3-207ENST00000397200 O00370 1275 aa15.68■□□□□ 0.1
CAPN3-207ENST00000397200 KRIT1O00522 736 aa15.68■□□□□ 0.1
CAPN3-207ENST00000397200 ATMINO43313 823 aaPredicted RBP15.68■□□□□ 0.1
CAPN3-207ENST00000397200 LPXNO60711 386 aa15.68■□□□□ 0.1
CAPN3-207ENST00000397200 CSPG5O95196 566 aa15.68■□□□□ 0.1
CAPN3-207ENST00000397200 CXCL14O95715 111 aa15.68■□□□□ 0.1
CAPN3-207ENST00000397200 CCDC130P13994 396 aa15.68■□□□□ 0.1
CAPN3-207ENST00000397200 RPL17P18621 184 aaKnown RBP15.68■□□□□ 0.1
CAPN3-207ENST00000397200 COMTP21964 271 aa15.68■□□□□ 0.1
CAPN3-207ENST00000397200 DNAJB1P25685 340 aa15.68■□□□□ 0.1
CAPN3-207ENST00000397200 CTNNA1P35221 906 aaKnown RBP15.68■□□□□ 0.1
CAPN3-207ENST00000397200 TNNT3P45378 269 aaPredicted RBP15.68■□□□□ 0.1
CAPN3-207ENST00000397200 RNASE9P60153 205 aaKnown RBP15.68■□□□□ 0.1
CAPN3-207ENST00000397200 ERVFC1P60507 584 aa15.68■□□□□ 0.1
CAPN3-207ENST00000397200 NOMO3P69849 1222 aa15.68■□□□□ 0.1
CAPN3-207ENST00000397200 MRPS25P82663 173 aaKnown RBP15.68■□□□□ 0.1
CAPN3-207ENST00000397200 CNGA2Q16280 664 aa15.68■□□□□ 0.1
CAPN3-207ENST00000397200 NFE2Q16621 373 aaPredicted RBP15.68■□□□□ 0.1
CAPN3-207ENST00000397200 CCDC142Q17RM4 750 aa15.68■□□□□ 0.1
CAPN3-207ENST00000397200 PPP1R26Q5T8A7 1209 aaPredicted RBP15.68■□□□□ 0.1
CAPN3-207ENST00000397200 PLPP4Q5VZY2 271 aa15.68■□□□□ 0.1
CAPN3-207ENST00000397200 ARHGAP17Q68EM7 881 aa15.68■□□□□ 0.1
CAPN3-207ENST00000397200 SLC8B1Q6J4K2 584 aa15.68■□□□□ 0.1
CAPN3-207ENST00000397200 RSPO2Q6UXX9 243 aaPredicted RBP15.68■□□□□ 0.1
CAPN3-207ENST00000397200 LRRTM3Q86VH5 581 aa15.68■□□□□ 0.1
CAPN3-207ENST00000397200 MREGQ8N565 214 aa15.68■□□□□ 0.1
CAPN3-207ENST00000397200 UBL4BQ8N7F7 174 aa15.68■□□□□ 0.1
CAPN3-207ENST00000397200 FAM71BQ8TC56 605 aa15.68■□□□□ 0.1
CAPN3-207ENST00000397200 SLC2A14Q8TDB8 520 aa15.68■□□□□ 0.1
CAPN3-207ENST00000397200 MICAL1Q8TDZ2 1067 aa15.68■□□□□ 0.1
CAPN3-207ENST00000397200 CASKIN2Q8WXE0 1202 aa15.68■□□□□ 0.1
CAPN3-207ENST00000397200 MYLPFQ96A32 169 aa15.68■□□□□ 0.1
CAPN3-207ENST00000397200 VCPIP1Q96JH7 1222 aa15.68■□□□□ 0.1
CAPN3-207ENST00000397200 PKMYT1Q99640 499 aa15.68■□□□□ 0.1
CAPN3-207ENST00000397200 CLSTN3Q9BQT9 956 aa15.68■□□□□ 0.1
CAPN3-207ENST00000397200 MED10Q9BTT4 135 aa15.68■□□□□ 0.1
CAPN3-207ENST00000397200 NGRNQ9NPE2 291 aaKnown RBP15.68■□□□□ 0.1
CAPN3-207ENST00000397200 FNIP2Q9P278 1114 aa15.68■□□□□ 0.1
CAPN3-207ENST00000397200 HESX1Q9UBX0 185 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms