RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 RMDN1Q96DB5 314 aa14.02□□□□□ -0.16
SEC13-209ENST00000397117 ELOVL4Q9GZR5 314 aa14.02□□□□□ -0.16
SEC13-209ENST00000397117 PLEKHA4Q9H4M7 779 aa14.02□□□□□ -0.16
SEC13-209ENST00000397117 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.02□□□□□ -0.16
SEC13-209ENST00000397117 HMGXB4Q9UGU5 601 aa14.02□□□□□ -0.16
SEC13-209ENST00000397117 KIAA1257Q9ULG3 409 aa14.02□□□□□ -0.16
SEC13-209ENST00000397117 R4GN57 208 aa14.02□□□□□ -0.16
SEC13-209ENST00000397117 DMXL1Q9Y485 3027 aa14.02□□□□□ -0.17
SEC13-209ENST00000397117 TMCO5BA8MYB1 307 aa14.01□□□□□ -0.17
SEC13-209ENST00000397117 TRAPPC3O43617 180 aa14.01□□□□□ -0.17
SEC13-209ENST00000397117 TADA2AO75478 443 aa14.01□□□□□ -0.17
SEC13-209ENST00000397117 KIF4AO95239 1232 aa14.01□□□□□ -0.17
SEC13-209ENST00000397117 WARSP23381 471 aaKnown RBP14.01□□□□□ -0.17
SEC13-209ENST00000397117 IGFBP6P24592 240 aaPredicted RBP14.01□□□□□ -0.17
SEC13-209ENST00000397117 BRD2P25440 801 aaKnown RBP14.01□□□□□ -0.17
SEC13-209ENST00000397117 AARSP49588 968 aaKnown RBP eCLIP14.01□□□□□ -0.17
SEC13-209ENST00000397117 KIF5AQ12840 1032 aa14.01□□□□□ -0.17
SEC13-209ENST00000397117 SGO2Q562F6 1265 aa14.01□□□□□ -0.17
SEC13-209ENST00000397117 WSCD1Q658N2 575 aa14.01□□□□□ -0.17
SEC13-209ENST00000397117 TRIM72Q6ZMU5 477 aa14.01□□□□□ -0.17
SEC13-209ENST00000397117 LIMS2Q7Z4I7 341 aa14.01□□□□□ -0.17
SEC13-209ENST00000397117 METTL23Q86XA0 190 aa14.01□□□□□ -0.17
SEC13-209ENST00000397117 PALB2Q86YC2 1186 aa14.01□□□□□ -0.17
SEC13-209ENST00000397117 REXO1L1PQ8IX06 675 aa14.01□□□□□ -0.17
SEC13-209ENST00000397117 KBTBD7Q8WVZ9 684 aa14.01□□□□□ -0.17
SEC13-209ENST00000397117 ZNF606Q8WXB4 792 aa14.01□□□□□ -0.17
SEC13-209ENST00000397117 RIN2Q8WYP3 895 aaPredicted RBP14.01□□□□□ -0.17
SEC13-209ENST00000397117 TWNKQ96RR1 684 aa14.01□□□□□ -0.17
SEC13-209ENST00000397117 COLEC11Q9BWP8 271 aa14.01□□□□□ -0.17
SEC13-209ENST00000397117 PRKD2Q9BZL6 878 aa14.01□□□□□ -0.17
SEC13-209ENST00000397117 TSGA10Q9BZW7 698 aa14.01□□□□□ -0.17
SEC13-209ENST00000397117 LZTFL1Q9NQ48 299 aa14.01□□□□□ -0.17
SEC13-209ENST00000397117 SLC2A4RGQ9NR83 387 aa14.01□□□□□ -0.17
SEC13-209ENST00000397117 FNIP2Q9P278 1114 aa14.01□□□□□ -0.17
SEC13-209ENST00000397117 DSEQ9UL01 958 aa14.01□□□□□ -0.17
SEC13-209ENST00000397117 CEP83Q9Y592 693 aa14.01□□□□□ -0.17
SEC13-209ENST00000397117 TMEM189-UBE2V1I3L0A0 370 aa14.01□□□□□ -0.17
SEC13-209ENST00000397117 TGM5O43548 720 aa14.01□□□□□ -0.17
SEC13-209ENST00000397117 KRT86O43790 486 aa14.01□□□□□ -0.17
SEC13-209ENST00000397117 DCNP07585 359 aaKnown RBP14.01□□□□□ -0.17
SEC13-209ENST00000397117 PDGFRBP09619 1106 aa14.01□□□□□ -0.17
SEC13-209ENST00000397117 VDRP11473 427 aa14.01□□□□□ -0.17
SEC13-209ENST00000397117 GZMAP12544 262 aa14.01□□□□□ -0.17
SEC13-209ENST00000397117 BRCC3P46736 316 aa14.01□□□□□ -0.17
SEC13-209ENST00000397117 LHX1P48742 406 aa14.01□□□□□ -0.17
SEC13-209ENST00000397117 HTR4Q13639 388 aa14.01□□□□□ -0.17
SEC13-209ENST00000397117 MIA3Q5JRA6 1907 aa14.01□□□□□ -0.17
SEC13-209ENST00000397117 ACOT1Q86TX2 421 aa14.01□□□□□ -0.17
SEC13-209ENST00000397117 TNIP3Q96KP6 325 aa14.01□□□□□ -0.17
SEC13-209ENST00000397117 PCDHB18PQ96TA0 734 aa14.01□□□□□ -0.17
SEC13-209ENST00000397117 GPR62Q9BZJ7 368 aa14.01□□□□□ -0.17
SEC13-209ENST00000397117 ZDHHC7Q9NXF8 308 aa14.01□□□□□ -0.17
SEC13-209ENST00000397117 SIT1Q9Y3P8 196 aa14.01□□□□□ -0.17
SEC13-209ENST00000397117 GPR179Q6PRD1 2367 aa14□□□□□ -0.17
SEC13-209ENST00000397117 I3L4J1 428 aa14□□□□□ -0.17
SEC13-209ENST00000397117 RTN2O75298 545 aa14□□□□□ -0.17
SEC13-209ENST00000397117 H2AFZP0C0S5 128 aa14□□□□□ -0.17
SEC13-209ENST00000397117 SP9P0CG40 484 aa14□□□□□ -0.17
SEC13-209ENST00000397117 STILQ15468 1287 aa14□□□□□ -0.17
SEC13-209ENST00000397117 CLEC16AQ2KHT3 1053 aa14□□□□□ -0.17
SEC13-209ENST00000397117 H2AFVQ71UI9 128 aa14□□□□□ -0.17
SEC13-209ENST00000397117 PASD1Q8IV76 773 aa14□□□□□ -0.17
SEC13-209ENST00000397117 OLIG1Q8TAK6 271 aa14□□□□□ -0.17
SEC13-209ENST00000397117 SPATA18Q8TC71 538 aa14□□□□□ -0.17
SEC13-209ENST00000397117 TFAP2BQ92481 460 aa14□□□□□ -0.17
SEC13-209ENST00000397117 SUSD3Q96L08 255 aa14□□□□□ -0.17
SEC13-209ENST00000397117 B3GALT6Q96L58 329 aa14□□□□□ -0.17
SEC13-209ENST00000397117 PIDD1Q9HB75 910 aa14□□□□□ -0.17
SEC13-209ENST00000397117 ARHGEF3Q9NR81 526 aa14□□□□□ -0.17
SEC13-209ENST00000397117 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14□□□□□ -0.175e-7■□□□□ 8.4
SEC13-209ENST00000397117 TIMM13Q9Y5L4 95 aaPredicted RBP14□□□□□ -0.17
SEC13-209ENST00000397117 MED19A0JLT2 244 aaPredicted RBP13.99□□□□□ -0.17
SEC13-209ENST00000397117 M0QZQ0 153 aa13.99□□□□□ -0.17
SEC13-209ENST00000397117 LSM8O95777 96 aaKnown RBP13.99□□□□□ -0.17
SEC13-209ENST00000397117 FTLP02792 175 aaPredicted RBP13.99□□□□□ -0.17
SEC13-209ENST00000397117 GLULP15104 373 aa13.99□□□□□ -0.17
SEC13-209ENST00000397117 LMO2P25791 158 aa13.99□□□□□ -0.17
SEC13-209ENST00000397117 NSFP46459 744 aaKnown RBP13.99□□□□□ -0.17
SEC13-209ENST00000397117 STARD6P59095 220 aa13.99□□□□□ -0.17
SEC13-209ENST00000397117 USP41Q3LFD5 358 aa13.99□□□□□ -0.17
SEC13-209ENST00000397117 PPP1R2P3Q6NXS1 205 aa13.99□□□□□ -0.17
SEC13-209ENST00000397117 FUT10Q6P4F1 479 aa13.99□□□□□ -0.17
SEC13-209ENST00000397117 CD300LGQ6UXG3 332 aa13.99□□□□□ -0.17
SEC13-209ENST00000397117 ZNF662Q6ZS27 426 aa13.99□□□□□ -0.17
SEC13-209ENST00000397117 C1orf210Q8IVY1 113 aa13.99□□□□□ -0.17
SEC13-209ENST00000397117 KIAA2013Q8IYS2 634 aa13.99□□□□□ -0.17
SEC13-209ENST00000397117 CTNNBL1Q8WYA6 563 aaPredicted RBP13.99□□□□□ -0.17
SEC13-209ENST00000397117 DDX43Q9NXZ2 648 aaKnown RBP13.99□□□□□ -0.17
SEC13-209ENST00000397117 TAS2R14Q9NYV8 317 aa13.99□□□□□ -0.17
SEC13-209ENST00000397117 ADAM28Q9UKQ2 775 aa13.99□□□□□ -0.17
SEC13-209ENST00000397117 INTUQ9ULD6 942 aa13.99□□□□□ -0.17
SEC13-209ENST00000397117 NENFQ9UMX5 172 aa13.99□□□□□ -0.17
SEC13-209ENST00000397117 GUCA1BQ9UMX6 200 aa13.99□□□□□ -0.17
SEC13-209ENST00000397117 PCDHB8Q9UN66 801 aa13.99□□□□□ -0.17
SEC13-209ENST00000397117 PCDHGC3Q9UN70 934 aa13.99□□□□□ -0.17
SEC13-209ENST00000397117 NCOR2Q9Y618 2525 aa13.99□□□□□ -0.17
SEC13-209ENST00000397117 NOTCH4Q99466 2003 aa13.99□□□□□ -0.17
SEC13-209ENST00000397117 A0A0U1RQJ8 604 aa13.98□□□□□ -0.17
SEC13-209ENST00000397117 GABRDO14764 452 aa13.98□□□□□ -0.17
SEC13-209ENST00000397117 KIF5CO60282 957 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms