RNA–Protein interactions for RNA: ENST00000396854.8

TM9SF1-202, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 1 (best) BASIC

Gene TM9SF1, Length 2,055 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-202ENST00000396854 DCP1BQ8IZD4 617 aaKnown RBP15.64■□□□□ 0.09
TM9SF1-202ENST00000396854 FUKQ8N0W3 1084 aa15.64■□□□□ 0.09
TM9SF1-202ENST00000396854 SLC2A14Q8TDB8 520 aa15.64■□□□□ 0.09
TM9SF1-202ENST00000396854 TGS1Q96RS0 853 aaKnown RBP15.64■□□□□ 0.09
TM9SF1-202ENST00000396854 PACSIN1Q9BY11 444 aa15.64■□□□□ 0.09
TM9SF1-202ENST00000396854 ZNF518BQ9C0D4 1074 aa15.64■□□□□ 0.09
TM9SF1-202ENST00000396854 FEZ2Q9UHY8 353 aaPredicted RBP15.64■□□□□ 0.09
TM9SF1-202ENST00000396854 LCMT1Q9UIC8 334 aa15.64■□□□□ 0.09
TM9SF1-202ENST00000396854 ATG2AQ2TAZ0 1938 aa15.64■□□□□ 0.09
TM9SF1-202ENST00000396854 NCANO14594 1321 aa15.63■□□□□ 0.09
TM9SF1-202ENST00000396854 CTSAP10619 480 aa15.63■□□□□ 0.09
TM9SF1-202ENST00000396854 SSTR3P32745 418 aaPredicted RBP15.63■□□□□ 0.09
TM9SF1-202ENST00000396854 MRPS25P82663 173 aaKnown RBP15.63■□□□□ 0.09
TM9SF1-202ENST00000396854 CENPCQ03188 943 aa15.63■□□□□ 0.09
TM9SF1-202ENST00000396854 SLC20A2Q08357 652 aa15.63■□□□□ 0.09
TM9SF1-202ENST00000396854 GOLGA7BQ2TAP0 167 aa15.63■□□□□ 0.09
TM9SF1-202ENST00000396854 SLC8B1Q6J4K2 584 aa15.63■□□□□ 0.09
TM9SF1-202ENST00000396854 PAQR9Q6ZVX9 377 aa15.63■□□□□ 0.09
TM9SF1-202ENST00000396854 TTC30AQ86WT1 665 aa15.63■□□□□ 0.09
TM9SF1-202ENST00000396854 TSEN2Q8NCE0 465 aaKnown RBP15.63■□□□□ 0.09
TM9SF1-202ENST00000396854 MYLPFQ96A32 169 aa15.63■□□□□ 0.09
TM9SF1-202ENST00000396854 B3GNT5Q9BYG0 378 aa15.63■□□□□ 0.09
TM9SF1-202ENST00000396854 ISCUQ9H1K1 167 aa15.63■□□□□ 0.09
TM9SF1-202ENST00000396854 MSRAQ9UJ68 235 aa15.63■□□□□ 0.09
TM9SF1-202ENST00000396854 SSX2IPQ9Y2D8 614 aa15.63■□□□□ 0.09
TM9SF1-202ENST00000396854 CEP83Q9Y592 693 aa15.63■□□□□ 0.09
TM9SF1-202ENST00000396854 A0A0A6YYK5 440 aaPredicted RBP15.63■□□□□ 0.09
TM9SF1-202ENST00000396854 M0QYV0 167 aa15.63■□□□□ 0.09
TM9SF1-202ENST00000396854 HSF2BPO75031 334 aa15.63■□□□□ 0.09
TM9SF1-202ENST00000396854 CAPN15O75808 1086 aa15.63■□□□□ 0.09
TM9SF1-202ENST00000396854 H2AFZP0C0S5 128 aa15.63■□□□□ 0.09
TM9SF1-202ENST00000396854 BCAT1P54687 386 aa15.63■□□□□ 0.09
TM9SF1-202ENST00000396854 MLLT1Q03111 559 aaPredicted RBP15.63■□□□□ 0.09
TM9SF1-202ENST00000396854 PPP1R2P3Q6NXS1 205 aa15.63■□□□□ 0.09
TM9SF1-202ENST00000396854 DENND1BQ6P3S1 775 aa15.63■□□□□ 0.09
TM9SF1-202ENST00000396854 RSPO2Q6UXX9 243 aaPredicted RBP15.63■□□□□ 0.09
TM9SF1-202ENST00000396854 H2AFVQ71UI9 128 aa15.63■□□□□ 0.09
TM9SF1-202ENST00000396854 SPRED2Q7Z698 418 aa15.63■□□□□ 0.09
TM9SF1-202ENST00000396854 PASD1Q8IV76 773 aa15.63■□□□□ 0.09
TM9SF1-202ENST00000396854 ANKRD52Q8NB46 1076 aa15.63■□□□□ 0.09
TM9SF1-202ENST00000396854 TMEM35BQ8NCS4 154 aa15.63■□□□□ 0.09
TM9SF1-202ENST00000396854 FBXO22Q8NEZ5 403 aa15.63■□□□□ 0.09
TM9SF1-202ENST00000396854 C11orf84Q9BUA3 381 aaPredicted RBP15.63■□□□□ 0.09
TM9SF1-202ENST00000396854 TMLHEQ9NVH6 421 aa15.63■□□□□ 0.09
TM9SF1-202ENST00000396854 HESX1Q9UBX0 185 aa15.63■□□□□ 0.09
TM9SF1-202ENST00000396854 LILRB3O75022 631 aa15.62■□□□□ 0.09
TM9SF1-202ENST00000396854 RTN2O75298 545 aa15.62■□□□□ 0.09
TM9SF1-202ENST00000396854 GLI1P08151 1106 aa15.62■□□□□ 0.09
TM9SF1-202ENST00000396854 OR4Q2P0C623 313 aa15.62■□□□□ 0.09
TM9SF1-202ENST00000396854 SETSIPP0DME0 302 aa15.62■□□□□ 0.09
TM9SF1-202ENST00000396854 ADORA2BP29275 332 aa15.62■□□□□ 0.09
TM9SF1-202ENST00000396854 GPD2P43304 727 aa15.62■□□□□ 0.09
TM9SF1-202ENST00000396854 SMARCB1Q12824 385 aa15.62■□□□□ 0.09
TM9SF1-202ENST00000396854 NFE2Q16621 373 aaPredicted RBP15.62■□□□□ 0.09
TM9SF1-202ENST00000396854 C4orf50Q6ZRC1 276 aa15.62■□□□□ 0.09
TM9SF1-202ENST00000396854 FAM35AQ86V20 835 aa15.62■□□□□ 0.09
TM9SF1-202ENST00000396854 MREGQ8N565 214 aa15.62■□□□□ 0.09
TM9SF1-202ENST00000396854 WDTC1Q8N5D0 677 aa15.62■□□□□ 0.09
TM9SF1-202ENST00000396854 SPPL3Q8TCT6 385 aa15.62■□□□□ 0.09
TM9SF1-202ENST00000396854 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.62■□□□□ 0.09
TM9SF1-202ENST00000396854 TAS2R14Q9NYV8 317 aa15.62■□□□□ 0.09
TM9SF1-202ENST00000396854 COL4A4P53420 1690 aaPredicted RBP15.62■□□□□ 0.09
TM9SF1-202ENST00000396854 CHD9Q3L8U1 2897 aa15.61■□□□□ 0.09
TM9SF1-202ENST00000396854 HEXIM1O94992 359 aaKnown RBP15.61■□□□□ 0.09
TM9SF1-202ENST00000396854 CREMQ03060 361 aa15.61■□□□□ 0.09
TM9SF1-202ENST00000396854 BST2Q10589 180 aaKnown RBP15.61■□□□□ 0.09
TM9SF1-202ENST00000396854 GPR17Q13304 367 aa15.61■□□□□ 0.09
TM9SF1-202ENST00000396854 IFI16Q16666 785 aaKnown RBP15.61■□□□□ 0.09
TM9SF1-202ENST00000396854 ACAD10Q6JQN1 1059 aa15.61■□□□□ 0.09
TM9SF1-202ENST00000396854 CHRDL2Q6WN34 429 aa15.61■□□□□ 0.09
TM9SF1-202ENST00000396854 C1orf131Q8NDD1 294 aaKnown RBP15.61■□□□□ 0.09
TM9SF1-202ENST00000396854 SMARCD1Q96GM5 515 aa15.61■□□□□ 0.09
TM9SF1-202ENST00000396854 FUBP3Q96I24 572 aaKnown RBP eCLIP15.61■□□□□ 0.09
TM9SF1-202ENST00000396854 DUSP16Q9BY84 665 aa15.61■□□□□ 0.09
TM9SF1-202ENST00000396854 NKX2-4Q9H2Z4 354 aa15.61■□□□□ 0.09
TM9SF1-202ENST00000396854 RXFP1Q9HBX9 757 aa15.61■□□□□ 0.09
TM9SF1-202ENST00000396854 ALG13Q9NP73 1137 aaKnown RBP15.61■□□□□ 0.09
TM9SF1-202ENST00000396854 MRPL17Q9NRX2 175 aaKnown RBP15.61■□□□□ 0.09
TM9SF1-202ENST00000396854 FNIP2Q9P278 1114 aa15.61■□□□□ 0.09
TM9SF1-202ENST00000396854 TMEM59LQ9UK28 342 aa15.61■□□□□ 0.09
TM9SF1-202ENST00000396854 CDY1Q9Y6F8 540 aa15.61■□□□□ 0.09
TM9SF1-202ENST00000396854 CLDN5O00501 218 aa15.61■□□□□ 0.09
TM9SF1-202ENST00000396854 C2CD2LO14523 706 aa15.61■□□□□ 0.09
TM9SF1-202ENST00000396854 TMEM253P0C7T8 217 aa15.61■□□□□ 0.09
TM9SF1-202ENST00000396854 NPR3P17342 541 aa15.61■□□□□ 0.09
TM9SF1-202ENST00000396854 SLC39A12Q504Y0 691 aa15.61■□□□□ 0.09
TM9SF1-202ENST00000396854 NAA35Q5VZE5 725 aa15.61■□□□□ 0.09
TM9SF1-202ENST00000396854 PHF13Q86YI8 300 aaPredicted RBP15.61■□□□□ 0.09
TM9SF1-202ENST00000396854 UBA3Q8TBC4 463 aa15.61■□□□□ 0.09
TM9SF1-202ENST00000396854 POF1BQ8WVV4 589 aa15.61■□□□□ 0.09
TM9SF1-202ENST00000396854 RUFY1Q96T51 708 aa15.61■□□□□ 0.09
TM9SF1-202ENST00000396854 CLSTN3Q9BQT9 956 aa15.61■□□□□ 0.09
TM9SF1-202ENST00000396854 MED10Q9BTT4 135 aa15.61■□□□□ 0.09
TM9SF1-202ENST00000396854 IRAK3Q9Y616 596 aa15.61■□□□□ 0.09
TM9SF1-202ENST00000396854 PLXNA3P51805 1871 aa15.6■□□□□ 0.09
TM9SF1-202ENST00000396854 FAM200BP0CF97 657 aa15.6■□□□□ 0.09
TM9SF1-202ENST00000396854 CPB1P15086 417 aa15.6■□□□□ 0.09
TM9SF1-202ENST00000396854 NSFP46459 744 aaKnown RBP15.6■□□□□ 0.09
TM9SF1-202ENST00000396854 CARSP49589 748 aaKnown RBP15.6■□□□□ 0.09
TM9SF1-202ENST00000396854 SMAD3P84022 425 aaKnown RBP15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms