RNA–Protein interactions for RNA: ENST00000396653.2

AP1S3-202, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 4 BASIC

Gene AP1S3, Length 589 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-202ENST00000396653 CEP83Q9Y592 693 aa17.34■□□□□ 0.37
AP1S3-202ENST00000396653 NUP210Q8TEM1 1887 aaPredicted RBP17.33■□□□□ 0.37
AP1S3-202ENST00000396653 GOLGA6L3A6NEY3 463 aa17.33■□□□□ 0.36
AP1S3-202ENST00000396653 LSM8O95777 96 aaKnown RBP17.33■□□□□ 0.36
AP1S3-202ENST00000396653 CDC25CP30307 473 aa17.33■□□□□ 0.36
AP1S3-202ENST00000396653 RPL34P49207 117 aaKnown RBP17.33■□□□□ 0.36
AP1S3-202ENST00000396653 TBX2Q13207 712 aaPredicted RBP17.33■□□□□ 0.36
AP1S3-202ENST00000396653 MTMR3Q13615 1198 aa17.33■□□□□ 0.36
AP1S3-202ENST00000396653 SMAD2Q15796 467 aaKnown RBP17.33■□□□□ 0.36
AP1S3-202ENST00000396653 PRSS36Q5K4E3 855 aa17.33■□□□□ 0.36
AP1S3-202ENST00000396653 DENND1BQ6P3S1 775 aa17.33■□□□□ 0.36
AP1S3-202ENST00000396653 TRIM72Q6ZMU5 477 aa17.33■□□□□ 0.36
AP1S3-202ENST00000396653 GPR152Q8TDT2 470 aa17.33■□□□□ 0.36
AP1S3-202ENST00000396653 ATXN2LQ8WWM7 1075 aaKnown RBP17.33■□□□□ 0.36
AP1S3-202ENST00000396653 OVCA2Q8WZ82 227 aa17.33■□□□□ 0.36
AP1S3-202ENST00000396653 GCNAQ96QF7 691 aa17.33■□□□□ 0.36
AP1S3-202ENST00000396653 IL21Q9HBE4 155 aa17.33■□□□□ 0.36
AP1S3-202ENST00000396653 ZNF334Q9HCZ1 680 aaPredicted RBP17.33■□□□□ 0.36
AP1S3-202ENST00000396653 YWHAQP27348 245 aa17.32■□□□□ 0.36
AP1S3-202ENST00000396653 HNRNPH3P31942 346 aaKnown RBP17.32■□□□□ 0.36
AP1S3-202ENST00000396653 ACADSBP45954 432 aa17.32■□□□□ 0.36
AP1S3-202ENST00000396653 PPP3CCP48454 512 aa17.32■□□□□ 0.36
AP1S3-202ENST00000396653 KIF11P52732 1056 aa17.32■□□□□ 0.36
AP1S3-202ENST00000396653 USP46P62068 366 aa17.32■□□□□ 0.36
AP1S3-202ENST00000396653 FMO1Q01740 532 aa17.32■□□□□ 0.36
AP1S3-202ENST00000396653 E4F1Q66K89 784 aaPredicted RBP17.32■□□□□ 0.36
AP1S3-202ENST00000396653 PTCRAQ6ISU1 281 aaPredicted RBP17.32■□□□□ 0.36
AP1S3-202ENST00000396653 GPRIN1Q7Z2K8 1008 aa17.32■□□□□ 0.36
AP1S3-202ENST00000396653 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.32■□□□□ 0.36
AP1S3-202ENST00000396653 CNGA4Q8IV77 575 aa17.32■□□□□ 0.36
AP1S3-202ENST00000396653 HS6ST3Q8IZP7 471 aa17.32■□□□□ 0.36
AP1S3-202ENST00000396653 SCML4Q8N228 414 aa17.32■□□□□ 0.36
AP1S3-202ENST00000396653 STKLD1Q8NE28 680 aa17.32■□□□□ 0.36
AP1S3-202ENST00000396653 PDZD8Q8NEN9 1154 aa17.32■□□□□ 0.36
AP1S3-202ENST00000396653 NOX5Q96PH1 765 aa17.32■□□□□ 0.36
AP1S3-202ENST00000396653 SLITRK1Q96PX8 696 aa17.32■□□□□ 0.36
AP1S3-202ENST00000396653 PDCL3Q9H2J4 239 aa17.32■□□□□ 0.36
AP1S3-202ENST00000396653 POMKQ9H5K3 350 aa17.32■□□□□ 0.36
AP1S3-202ENST00000396653 GRPEL1Q9HAV7 217 aa17.32■□□□□ 0.36
AP1S3-202ENST00000396653 LRRC4Q9HBW1 653 aa17.32■□□□□ 0.36
AP1S3-202ENST00000396653 ZMYM5Q9UJ78 669 aa17.32■□□□□ 0.36
AP1S3-202ENST00000396653 CDH22Q9UJ99 828 aa17.32■□□□□ 0.36
AP1S3-202ENST00000396653 MAGED2Q9UNF1 606 aaPredicted RBP17.32■□□□□ 0.36
AP1S3-202ENST00000396653 USP3Q9Y6I4 520 aa17.32■□□□□ 0.36
AP1S3-202ENST00000396653 SOBPA7XYQ1 873 aa17.31■□□□□ 0.36
AP1S3-202ENST00000396653 TULP2O00295 520 aa17.31■□□□□ 0.36
AP1S3-202ENST00000396653 MFAP3LO75121 409 aa17.31■□□□□ 0.36
AP1S3-202ENST00000396653 ADCY5O95622 1261 aa17.31■□□□□ 0.36
AP1S3-202ENST00000396653 F11P03951 625 aa17.31■□□□□ 0.36
AP1S3-202ENST00000396653 MMEP08473 750 aa17.31■□□□□ 0.36
AP1S3-202ENST00000396653 CFHP08603 1231 aa17.31■□□□□ 0.36
AP1S3-202ENST00000396653 MYL4P12829 197 aa17.31■□□□□ 0.36
AP1S3-202ENST00000396653 CHRNB2P17787 502 aa17.31■□□□□ 0.36
AP1S3-202ENST00000396653 FSHRP23945 695 aa17.31■□□□□ 0.36
AP1S3-202ENST00000396653 GABRR2P28476 465 aa17.31■□□□□ 0.36
AP1S3-202ENST00000396653 SSTR3P32745 418 aaPredicted RBP17.31■□□□□ 0.36
AP1S3-202ENST00000396653 NTHL1P78549 312 aa17.31■□□□□ 0.36
AP1S3-202ENST00000396653 TFF2Q03403 129 aa17.31■□□□□ 0.36
AP1S3-202ENST00000396653 ARID5AQ03989 594 aa17.31■□□□□ 0.36
AP1S3-202ENST00000396653 TAF3Q5VWG9 929 aa17.31■□□□□ 0.36
AP1S3-202ENST00000396653 PMF1Q6P1K2 205 aa17.31■□□□□ 0.36
AP1S3-202ENST00000396653 CCDC186Q7Z3E2 898 aa17.31■□□□□ 0.36
AP1S3-202ENST00000396653 TMEM35BQ8NCS4 154 aa17.31■□□□□ 0.36
AP1S3-202ENST00000396653 SLC20A1Q8WUM9 679 aa17.31■□□□□ 0.36
AP1S3-202ENST00000396653 CPLX3Q8WVH0 158 aa17.31■□□□□ 0.36
AP1S3-202ENST00000396653 FBXO32Q969P5 355 aa17.31■□□□□ 0.36
AP1S3-202ENST00000396653 DNAJC7Q99615 494 aa17.31■□□□□ 0.36
AP1S3-202ENST00000396653 SYT11Q9BT88 431 aa17.31■□□□□ 0.36
AP1S3-202ENST00000396653 SLC4A5Q9BY07 1137 aa17.31■□□□□ 0.36
AP1S3-202ENST00000396653 SCML2Q9UQR0 700 aa17.31■□□□□ 0.36
AP1S3-202ENST00000396653 USTQ9Y2C2 406 aa17.31■□□□□ 0.36
AP1S3-202ENST00000396653 MRPS23Q9Y3D9 190 aaKnown RBP17.31■□□□□ 0.36
AP1S3-202ENST00000396653 BZW2Q9Y6E2 419 aaKnown RBP17.31■□□□□ 0.36
AP1S3-202ENST00000396653 HELZP42694 1942 aaKnown RBP17.31■□□□□ 0.36
AP1S3-202ENST00000396653 MOSPD3O75425 235 aa17.3■□□□□ 0.36
AP1S3-202ENST00000396653 TADA3O75528 432 aa17.3■□□□□ 0.36
AP1S3-202ENST00000396653 CYP1A1P04798 512 aaPredicted RBP17.3■□□□□ 0.36
AP1S3-202ENST00000396653 DDX6P26196 483 aaKnown RBP eCLIP17.3■□□□□ 0.36
AP1S3-202ENST00000396653 CCR2P41597 374 aa17.3■□□□□ 0.36
AP1S3-202ENST00000396653 NOMO3P69849 1222 aa17.3■□□□□ 0.36
AP1S3-202ENST00000396653 MRPS5P82675 430 aaKnown RBP17.3■□□□□ 0.36
AP1S3-202ENST00000396653 KLHL30Q0D2K2 578 aa17.3■□□□□ 0.36
AP1S3-202ENST00000396653 PDCLQ13371 301 aa17.3■□□□□ 0.36
AP1S3-202ENST00000396653 SLC5A9Q2M3M2 681 aa17.3■□□□□ 0.36
AP1S3-202ENST00000396653 GAREM2Q75VX8 874 aa17.3■□□□□ 0.36
AP1S3-202ENST00000396653 TMEM150AQ86TG1 271 aa17.3■□□□□ 0.36
AP1S3-202ENST00000396653 PASD1Q8IV76 773 aa17.3■□□□□ 0.36
AP1S3-202ENST00000396653 DRC7Q8IY82 874 aa17.3■□□□□ 0.36
AP1S3-202ENST00000396653 WDTC1Q8N5D0 677 aa17.3■□□□□ 0.36
AP1S3-202ENST00000396653 C1orf131Q8NDD1 294 aaKnown RBP17.3■□□□□ 0.36
AP1S3-202ENST00000396653 OR8K1Q8NGG5 319 aa17.3■□□□□ 0.36
AP1S3-202ENST00000396653 SCAMP5Q8TAC9 235 aa17.3■□□□□ 0.36
AP1S3-202ENST00000396653 SHKBP1Q8TBC3 707 aa17.3■□□□□ 0.36
AP1S3-202ENST00000396653 AGPAT1Q99943 283 aa17.3■□□□□ 0.36
AP1S3-202ENST00000396653 PHF7Q9BWX1 381 aaPredicted RBP17.3■□□□□ 0.36
AP1S3-202ENST00000396653 CNGB3Q9NQW8 809 aa17.3■□□□□ 0.36
AP1S3-202ENST00000396653 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.3■□□□□ 0.36
AP1S3-202ENST00000396653 ZFP37Q9Y6Q3 630 aaPredicted RBP17.3■□□□□ 0.36
AP1S3-202ENST00000396653 SPTBN5Q9NRC6 3674 aaKnown RBP17.3■□□□□ 0.36
AP1S3-202ENST00000396653 AKR1B15C9JRZ8 316 aaPredicted RBP17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms