RNA–Protein interactions for RNA: ENST00000396342.6

DDR1-229, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 675 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-229ENST00000396342 CALUO43852 315 aaPredicted RBP17.4■□□□□ 0.38
DDR1-229ENST00000396342 APODP05090 189 aa17.4■□□□□ 0.38
DDR1-229ENST00000396342 SLC7A9P82251 487 aa17.4■□□□□ 0.38
DDR1-229ENST00000396342 NCOA4Q13772 614 aa17.4■□□□□ 0.38
DDR1-229ENST00000396342 BYSLQ13895 437 aaKnown RBP17.4■□□□□ 0.38
DDR1-229ENST00000396342 SGSM1Q2NKQ1 1148 aa17.4■□□□□ 0.38
DDR1-229ENST00000396342 PPM1JQ5JR12 505 aa17.4■□□□□ 0.38
DDR1-229ENST00000396342 HECTD3Q5T447 861 aa17.4■□□□□ 0.38
DDR1-229ENST00000396342 TAF4BQ92750 862 aa17.4■□□□□ 0.38
DDR1-229ENST00000396342 SMARCD1Q96GM5 515 aa17.4■□□□□ 0.38
DDR1-229ENST00000396342 SLC22A12Q96S37 553 aa17.4■□□□□ 0.38
DDR1-229ENST00000396342 COMMD8Q9NX08 183 aa17.4■□□□□ 0.38
DDR1-229ENST00000396342 SMPD4Q9NXE4 827 aa17.4■□□□□ 0.38
DDR1-229ENST00000396342 CFAP97Q9P2B7 532 aa17.4■□□□□ 0.38
DDR1-229ENST00000396342 MYO15AQ9UKN7 3530 aa17.4■□□□□ 0.38
DDR1-229ENST00000396342 MAP3K13O43283 966 aa17.39■□□□□ 0.37
DDR1-229ENST00000396342 EPN2O95208 641 aa17.39■□□□□ 0.37
DDR1-229ENST00000396342 ZNF806P0C7X5 589 aa17.39■□□□□ 0.37
DDR1-229ENST00000396342 KRT13P13646 458 aa17.39■□□□□ 0.37
DDR1-229ENST00000396342 TGM1P22735 817 aa17.39■□□□□ 0.37
DDR1-229ENST00000396342 HOXD13P35453 343 aa17.39■□□□□ 0.37
DDR1-229ENST00000396342 SEC13P55735 322 aa17.39■□□□□ 0.37
DDR1-229ENST00000396342 MRPS21P82921 87 aaKnown RBP17.39■□□□□ 0.37
DDR1-229ENST00000396342 CUL4BQ13620 913 aa17.39■□□□□ 0.37
DDR1-229ENST00000396342 HSF5Q4G112 596 aaPredicted RBP17.39■□□□□ 0.37
DDR1-229ENST00000396342 C2orf27AQ580R0 203 aa17.39■□□□□ 0.37
DDR1-229ENST00000396342 FILIP1Q7Z7B0 1213 aa17.39■□□□□ 0.37
DDR1-229ENST00000396342 KBTBD6Q86V97 674 aa17.39■□□□□ 0.37
DDR1-229ENST00000396342 OTUB2Q96DC9 234 aa17.39■□□□□ 0.37
DDR1-229ENST00000396342 SPACA7Q96KW9 195 aa17.39■□□□□ 0.37
DDR1-229ENST00000396342 PNKPQ96T60 521 aa17.39■□□□□ 0.37
DDR1-229ENST00000396342 LINC00597Q9H2U6 94 aa17.39■□□□□ 0.37
DDR1-229ENST00000396342 FBXO44Q9H4M3 255 aa17.39■□□□□ 0.37
DDR1-229ENST00000396342 POLMQ9NP87 494 aaPredicted RBP17.39■□□□□ 0.37
DDR1-229ENST00000396342 BCCIPQ9P287 314 aaKnown RBP eCLIP17.39■□□□□ 0.37
DDR1-229ENST00000396342 EBF1Q9UH73 591 aa17.39■□□□□ 0.37
DDR1-229ENST00000396342 ZNF292O60281 2723 aa17.39■□□□□ 0.37
DDR1-229ENST00000396342 RPL13P26373 211 aaKnown RBP17.38■□□□□ 0.37
DDR1-229ENST00000396342 CCDC142Q17RM4 750 aa17.38■□□□□ 0.37
DDR1-229ENST00000396342 EOGTQ5NDL2 527 aa17.38■□□□□ 0.37
DDR1-229ENST00000396342 CEP135Q66GS9 1140 aa17.38■□□□□ 0.37
DDR1-229ENST00000396342 SCARA5Q6ZMJ2 495 aa17.38■□□□□ 0.37
DDR1-229ENST00000396342 TRMT11Q7Z4G4 463 aaKnown RBP17.38■□□□□ 0.37
DDR1-229ENST00000396342 CHAMP1Q96JM3 812 aa17.38■□□□□ 0.37
DDR1-229ENST00000396342 SPATA32Q96LK8 384 aa17.38■□□□□ 0.37
DDR1-229ENST00000396342 ZNF518BQ9C0D4 1074 aa17.38■□□□□ 0.37
DDR1-229ENST00000396342 C2orf42Q9NWW7 574 aa17.38■□□□□ 0.37
DDR1-229ENST00000396342 SERTAD1Q9UHV2 236 aa17.38■□□□□ 0.37
DDR1-229ENST00000396342 SCN1AP35498 2009 aa17.38■□□□□ 0.37
DDR1-229ENST00000396342 E2F8A0AVK6 867 aa17.37■□□□□ 0.37
DDR1-229ENST00000396342 PDXKO00764 312 aa17.37■□□□□ 0.37
DDR1-229ENST00000396342 AP1G2O75843 785 aa17.37■□□□□ 0.37
DDR1-229ENST00000396342 ADH5P11766 374 aa17.37■□□□□ 0.37
DDR1-229ENST00000396342 MPLP40238 635 aa17.37■□□□□ 0.37
DDR1-229ENST00000396342 EIF2DP41214 584 aaKnown RBP17.37■□□□□ 0.37
DDR1-229ENST00000396342 PIK3CAP42336 1068 aa17.37■□□□□ 0.37
DDR1-229ENST00000396342 USP46P62068 366 aa17.37■□□□□ 0.37
DDR1-229ENST00000396342 KRT85P78386 507 aa17.37■□□□□ 0.37
DDR1-229ENST00000396342 CREB5Q02930 508 aa17.37■□□□□ 0.37
DDR1-229ENST00000396342 GAD2Q05329 585 aa17.37■□□□□ 0.37
DDR1-229ENST00000396342 WDR44Q5JSH3 913 aa17.37■□□□□ 0.37
DDR1-229ENST00000396342 SDE2Q6IQ49 451 aa17.37■□□□□ 0.37
DDR1-229ENST00000396342 PKN3Q6P5Z2 889 aa17.37■□□□□ 0.37
DDR1-229ENST00000396342 PGBD3Q8N328 593 aa17.37■□□□□ 0.37
DDR1-229ENST00000396342 SPRYD3Q8NCJ5 442 aa17.37■□□□□ 0.37
DDR1-229ENST00000396342 ZC3H10Q96K80 434 aaKnown RBP17.37■□□□□ 0.37
DDR1-229ENST00000396342 B3GNT5Q9BYG0 378 aa17.37■□□□□ 0.37
DDR1-229ENST00000396342 VRTNQ9H8Y1 702 aa17.37■□□□□ 0.37
DDR1-229ENST00000396342 FBRSL1Q9HCM7 1045 aaKnown RBP17.37■□□□□ 0.37
DDR1-229ENST00000396342 LSM7Q9UK45 103 aaKnown RBP17.37■□□□□ 0.37
DDR1-229ENST00000396342 CLDN5O00501 218 aa17.36■□□□□ 0.37
DDR1-229ENST00000396342 IKBKBO14920 756 aa17.36■□□□□ 0.37
DDR1-229ENST00000396342 CAVIN2O95810 425 aa17.36■□□□□ 0.37
DDR1-229ENST00000396342 NR3C1P04150 777 aa17.36■□□□□ 0.37
DDR1-229ENST00000396342 CASP1P29466 404 aa17.36■□□□□ 0.37
DDR1-229ENST00000396342 GRIA2P42262 883 aa17.36■□□□□ 0.37
DDR1-229ENST00000396342 RAP1GAPP47736 663 aa17.36■□□□□ 0.37
DDR1-229ENST00000396342 LIMK1P53667 647 aa17.36■□□□□ 0.37
DDR1-229ENST00000396342 DNM1Q05193 864 aaKnown RBP17.36■□□□□ 0.37
DDR1-229ENST00000396342 DHCR24Q15392 516 aa17.36■□□□□ 0.37
DDR1-229ENST00000396342 ANO7Q6IWH7 933 aa17.36■□□□□ 0.37
DDR1-229ENST00000396342 TADA2BQ86TJ2 420 aa17.36■□□□□ 0.37
DDR1-229ENST00000396342 FAM35AQ86V20 835 aa17.36■□□□□ 0.37
DDR1-229ENST00000396342 UNC93AQ86WB7 457 aa17.36■□□□□ 0.37
DDR1-229ENST00000396342 SLC9A9Q8IVB4 645 aa17.36■□□□□ 0.37
DDR1-229ENST00000396342 ADGRG2Q8IZP9 1017 aa17.36■□□□□ 0.37
DDR1-229ENST00000396342 TMC2Q8TDI7 906 aa17.36■□□□□ 0.37
DDR1-229ENST00000396342 PARD3BQ8TEW8 1205 aa17.36■□□□□ 0.37
DDR1-229ENST00000396342 PAGE5Q96GU1 130 aa17.36■□□□□ 0.37
DDR1-229ENST00000396342 DPEP3Q9H4B8 488 aa17.36■□□□□ 0.37
DDR1-229ENST00000396342 SMYD3Q9H7B4 428 aa17.36■□□□□ 0.37
DDR1-229ENST00000396342 ARHGEF4Q9NR80 690 aa17.36■□□□□ 0.37
DDR1-229ENST00000396342 TLR8Q9NR97 1041 aaKnown RBP17.36■□□□□ 0.37
DDR1-229ENST00000396342 KRT82Q9NSB4 513 aa17.36■□□□□ 0.37
DDR1-229ENST00000396342 RCOR1Q9UKL0 485 aa17.36■□□□□ 0.37
DDR1-229ENST00000396342 FANCMQ8IYD8 2048 aa17.36■□□□□ 0.37
DDR1-229ENST00000396342 TSC2P49815 1807 aa17.35■□□□□ 0.37
DDR1-229ENST00000396342 NUP210Q8TEM1 1887 aaPredicted RBP17.35■□□□□ 0.37
DDR1-229ENST00000396342 TBC1D3BA6NDS4 549 aa17.35■□□□□ 0.37
DDR1-229ENST00000396342 LRRIQ3A6PVS8 624 aaPredicted RBP17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms