RNA–Protein interactions for RNA: ENST00000395963.2

CCR9-203, Transcript of C-C motif chemokine receptor 9, humanhuman

TSL 1 (best) BASIC

Gene CCR9, Length 2,512 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9-203ENST00000395963 NT5C1B-RDH14C9J2C7 533 aa9.3□□□□□ -0.92
CCR9-203ENST00000395963 KIF1CO43896 1103 aaKnown RBP9.3□□□□□ -0.92
CCR9-203ENST00000395963 PSMC1P62191 440 aaKnown RBP9.3□□□□□ -0.92
CCR9-203ENST00000395963 ROR1Q01973 937 aa9.3□□□□□ -0.92
CCR9-203ENST00000395963 CYP27A1Q02318 531 aa9.3□□□□□ -0.92
CCR9-203ENST00000395963 TUBB2AQ13885 445 aa9.3□□□□□ -0.92
CCR9-203ENST00000395963 ELF2Q15723 593 aa9.3□□□□□ -0.92
CCR9-203ENST00000395963 SLC39A12Q504Y0 691 aa9.3□□□□□ -0.92
CCR9-203ENST00000395963 PM20D1Q6GTS8 502 aa9.3□□□□□ -0.92
CCR9-203ENST00000395963 TMEM130Q8N3G9 435 aa9.3□□□□□ -0.92
CCR9-203ENST00000395963 NIPA2Q8N8Q9 360 aa9.3□□□□□ -0.92
CCR9-203ENST00000395963 C12orf29Q8N999 325 aa9.3□□□□□ -0.92
CCR9-203ENST00000395963 LEMD2Q8NC56 503 aa9.3□□□□□ -0.92
CCR9-203ENST00000395963 MNS1Q8NEH6 495 aa9.3□□□□□ -0.92
CCR9-203ENST00000395963 ELMO3Q96BJ8 720 aa9.3□□□□□ -0.92
CCR9-203ENST00000395963 TUBB2BQ9BVA1 445 aa9.3□□□□□ -0.92
CCR9-203ENST00000395963 TTLL2Q9BWV7 592 aa9.3□□□□□ -0.92
CCR9-203ENST00000395963 PLEKHA4Q9H4M7 779 aa9.3□□□□□ -0.92
CCR9-203ENST00000395963 SYNCQ9H7C4 482 aa9.3□□□□□ -0.92
CCR9-203ENST00000395963 LRRC4Q9HBW1 653 aa9.3□□□□□ -0.92
CCR9-203ENST00000395963 FAM49BQ9NUQ9 324 aa9.3□□□□□ -0.92
CCR9-203ENST00000395963 UXTQ9UBK9 157 aaPredicted RBP9.3□□□□□ -0.92
CCR9-203ENST00000395963 CNOT8Q9UFF9 292 aaKnown RBP9.3□□□□□ -0.92
CCR9-203ENST00000395963 USP3Q9Y6I4 520 aa9.3□□□□□ -0.92
CCR9-203ENST00000395963 F8W810 466 aa9.29□□□□□ -0.92
CCR9-203ENST00000395963 DPYSL4O14531 572 aa9.29□□□□□ -0.92
CCR9-203ENST00000395963 CCDC130P13994 396 aa9.29□□□□□ -0.92
CCR9-203ENST00000395963 ACAT1P24752 427 aaKnown RBP9.29□□□□□ -0.92
CCR9-203ENST00000395963 PTPN20Q4JDL3 420 aa9.29□□□□□ -0.92
CCR9-203ENST00000395963 PPP1R15BQ5SWA1 713 aa9.29□□□□□ -0.92
CCR9-203ENST00000395963 ACBD5Q5T8D3 534 aaPredicted RBP9.29□□□□□ -0.92
CCR9-203ENST00000395963 DNAJC24Q6P3W2 148 aa9.29□□□□□ -0.92
CCR9-203ENST00000395963 SYT10Q6XYQ8 523 aa9.29□□□□□ -0.92
CCR9-203ENST00000395963 NYAP1Q6ZVC0 841 aa9.29□□□□□ -0.92
CCR9-203ENST00000395963 ITIH5Q86UX2 942 aa9.29□□□□□ -0.92
CCR9-203ENST00000395963 PIGZQ86VD9 579 aa9.29□□□□□ -0.92
CCR9-203ENST00000395963 XYLT1Q86Y38 959 aa9.29□□□□□ -0.92
CCR9-203ENST00000395963 MRPL43Q8N983 215 aaKnown RBP9.29□□□□□ -0.92
CCR9-203ENST00000395963 TRMT2BQ96GJ1 504 aaKnown RBP9.29□□□□□ -0.92
CCR9-203ENST00000395963 CLSTN3Q9BQT9 956 aa9.29□□□□□ -0.92
CCR9-203ENST00000395963 PBX4Q9BYU1 374 aa9.29□□□□□ -0.92
CCR9-203ENST00000395963 HCSTQ9UBK5 93 aa9.29□□□□□ -0.92
CCR9-203ENST00000395963 IP6K2Q9UHH9 426 aa9.29□□□□□ -0.92
CCR9-203ENST00000395963 CDY1Q9Y6F8 540 aa9.29□□□□□ -0.92
CCR9-203ENST00000395963 PLXNA3P51805 1871 aa9.29□□□□□ -0.92
CCR9-203ENST00000395963 GBF1Q92538 1859 aa9.29□□□□□ -0.92
CCR9-203ENST00000395963 PLXNA4Q9HCM2 1894 aa9.29□□□□□ -0.92
CCR9-203ENST00000395963 HSF2BPO75031 334 aa9.29□□□□□ -0.92
CCR9-203ENST00000395963 CA3P07451 260 aa9.29□□□□□ -0.92
CCR9-203ENST00000395963 CSH1P0DML2 217 aa9.29□□□□□ -0.92
CCR9-203ENST00000395963 CSH2P0DML3 217 aa9.29□□□□□ -0.92
CCR9-203ENST00000395963 ADORA2BP29275 332 aa9.29□□□□□ -0.92
CCR9-203ENST00000395963 SLC6A3Q01959 620 aa9.29□□□□□ -0.92
CCR9-203ENST00000395963 MLLT1Q03111 559 aaPredicted RBP9.29□□□□□ -0.92
CCR9-203ENST00000395963 CLUL1Q15846 466 aa9.29□□□□□ -0.92
CCR9-203ENST00000395963 TADA2BQ86TJ2 420 aa9.29□□□□□ -0.92
CCR9-203ENST00000395963 PALB2Q86YC2 1186 aa9.29□□□□□ -0.92
CCR9-203ENST00000395963 SIX6OS1Q8N1H7 587 aa9.29□□□□□ -0.92
CCR9-203ENST00000395963 FEZF2Q8TBJ5 459 aa9.29□□□□□ -0.92
CCR9-203ENST00000395963 ZNF592Q92610 1267 aa9.29□□□□□ -0.92
CCR9-203ENST00000395963 RABGGTAQ92696 567 aa9.29□□□□□ -0.92
CCR9-203ENST00000395963 GOLGA1Q92805 767 aa9.29□□□□□ -0.92
CCR9-203ENST00000395963 SMOQ99835 787 aa9.29□□□□□ -0.92
CCR9-203ENST00000395963 DESI2Q9BSY9 194 aa9.29□□□□□ -0.92
CCR9-203ENST00000395963 SELENOOQ9BVL4 669 aa9.29□□□□□ -0.92
CCR9-203ENST00000395963 L2HGDHQ9H9P8 463 aa9.29□□□□□ -0.92
CCR9-203ENST00000395963 SLC28A3Q9HAS3 691 aa9.29□□□□□ -0.92
CCR9-203ENST00000395963 ACP6Q9NPH0 428 aa9.29□□□□□ -0.92
CCR9-203ENST00000395963 FBXW11Q9UKB1 542 aa9.29□□□□□ -0.92
CCR9-203ENST00000395963 CENPFP49454 3210 aa9.28□□□□□ -0.92
CCR9-203ENST00000395963 WDR27A2RRH5 827 aa9.28□□□□□ -0.92
CCR9-203ENST00000395963 LCHNA4D1U4 455 aa9.28□□□□□ -0.92
CCR9-203ENST00000395963 MIF4GDA9UHW6 222 aaKnown RBP9.28□□□□□ -0.92
CCR9-203ENST00000395963 HHLA1C9JL84 531 aa9.28□□□□□ -0.92
CCR9-203ENST00000395963 ATP2C2O75185 946 aa9.28□□□□□ -0.92
CCR9-203ENST00000395963 HNRNPA1P09651 372 aaKnown RBP eCLIP9.28□□□□□ -0.92
CCR9-203ENST00000395963 IGFBP6P24592 240 aaPredicted RBP9.28□□□□□ -0.92
CCR9-203ENST00000395963 ELF1P32519 619 aa9.28□□□□□ -0.92
CCR9-203ENST00000395963 AIF1P55008 147 aa9.28□□□□□ -0.92
CCR9-203ENST00000395963 GPM6BQ13491 265 aa9.28□□□□□ -0.92
CCR9-203ENST00000395963 PIGHQ14442 188 aaPredicted RBP9.28□□□□□ -0.92
CCR9-203ENST00000395963 VEPH1Q14D04 833 aa9.28□□□□□ -0.92
CCR9-203ENST00000395963 PPP2R2DQ66LE6 453 aa9.28□□□□□ -0.92
CCR9-203ENST00000395963 MMS22LQ6ZRQ5 1243 aa9.28□□□□□ -0.92
CCR9-203ENST00000395963 TMC7Q7Z402 723 aa9.28□□□□□ -0.92
CCR9-203ENST00000395963 SLFN11Q7Z7L1 901 aa9.28□□□□□ -0.92
CCR9-203ENST00000395963 LRRTM3Q86VH5 581 aa9.28□□□□□ -0.92
CCR9-203ENST00000395963 C10orf67Q8IYJ2 551 aa9.28□□□□□ -0.92
CCR9-203ENST00000395963 NUP93Q8N1F7 819 aa9.28□□□□□ -0.92
CCR9-203ENST00000395963 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.28□□□□□ -0.92
CCR9-203ENST00000395963 ZNF564Q8TBZ8 553 aaPredicted RBP9.28□□□□□ -0.92
CCR9-203ENST00000395963 POF1BQ8WVV4 589 aa9.28□□□□□ -0.92
CCR9-203ENST00000395963 CPA5Q8WXQ8 436 aa9.28□□□□□ -0.92
CCR9-203ENST00000395963 MYRFLQ96LU7 910 aa9.28□□□□□ -0.92
CCR9-203ENST00000395963 KLHL5Q96PQ7 755 aa9.28□□□□□ -0.92
CCR9-203ENST00000395963 CPXM1Q96SM3 734 aa9.28□□□□□ -0.92
CCR9-203ENST00000395963 C11orf70Q9BRQ4 267 aa9.28□□□□□ -0.92
CCR9-203ENST00000395963 THAP2Q9H0W7 228 aa9.28□□□□□ -0.92
CCR9-203ENST00000395963 ENTPD7Q9NQZ7 604 aa9.28□□□□□ -0.92
CCR9-203ENST00000395963 SCML2Q9UQR0 700 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms