RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 CLP1Q92989 425 aaKnown RBP21.46■■□□□ 1.03
VCPKMT-202ENST00000395860 OSBPL9Q96SU4 736 aa21.46■■□□□ 1.03
VCPKMT-202ENST00000395860 L2HGDHQ9H9P8 463 aa21.46■■□□□ 1.03
VCPKMT-202ENST00000395860 BACE2Q9Y5Z0 518 aa21.46■■□□□ 1.03
VCPKMT-202ENST00000395860 PLXNA4Q9HCM2 1894 aa21.46■■□□□ 1.03
VCPKMT-202ENST00000395860 HHLA1C9JL84 531 aa21.46■■□□□ 1.03
VCPKMT-202ENST00000395860 GRAP2O75791 330 aa21.46■■□□□ 1.03
VCPKMT-202ENST00000395860 OGDHQ02218 1023 aa21.46■■□□□ 1.03
VCPKMT-202ENST00000395860 DSG1Q02413 1049 aa21.46■■□□□ 1.03
VCPKMT-202ENST00000395860 SMARCB1Q12824 385 aa21.46■■□□□ 1.03
VCPKMT-202ENST00000395860 PIGHQ14442 188 aaPredicted RBP21.46■■□□□ 1.03
VCPKMT-202ENST00000395860 FNIP1Q8TF40 1166 aa21.46■■□□□ 1.03
VCPKMT-202ENST00000395860 MIF4GDA9UHW6 222 aaKnown RBP21.45■■□□□ 1.02
VCPKMT-202ENST00000395860 F8VP50 259 aa21.45■■□□□ 1.02
VCPKMT-202ENST00000395860 FGF18O76093 207 aa21.45■■□□□ 1.02
VCPKMT-202ENST00000395860 URODP06132 367 aa21.45■■□□□ 1.02
VCPKMT-202ENST00000395860 LINC00271P0C7V0 271 aa21.45■■□□□ 1.02
VCPKMT-202ENST00000395860 PSMA2P25787 234 aa21.45■■□□□ 1.02
VCPKMT-202ENST00000395860 CXCR5P32302 372 aa21.45■■□□□ 1.02
VCPKMT-202ENST00000395860 MAN1A1P33908 653 aa21.45■■□□□ 1.02
VCPKMT-202ENST00000395860 SCNN1AP37088 669 aa21.45■■□□□ 1.02
VCPKMT-202ENST00000395860 ZNF252P-AS1Q0IIN9 211 aa21.45■■□□□ 1.02
VCPKMT-202ENST00000395860 RAB41Q5JT25 222 aa21.45■■□□□ 1.02
VCPKMT-202ENST00000395860 GPRIN1Q7Z2K8 1008 aa21.45■■□□□ 1.02
VCPKMT-202ENST00000395860 CPNE8Q86YQ8 564 aa21.45■■□□□ 1.02
VCPKMT-202ENST00000395860 SCN4BQ8IWT1 228 aa21.45■■□□□ 1.02
VCPKMT-202ENST00000395860 VPS52Q8N1B4 723 aa21.45■■□□□ 1.02
VCPKMT-202ENST00000395860 PNPLA8Q9NP80 782 aa21.45■■□□□ 1.02
VCPKMT-202ENST00000395860 TMEM59LQ9UK28 342 aa21.45■■□□□ 1.02
VCPKMT-202ENST00000395860 USTQ9Y2C2 406 aa21.45■■□□□ 1.02
VCPKMT-202ENST00000395860 GBF1Q92538 1859 aa21.45■■□□□ 1.02
VCPKMT-202ENST00000395860 LCHNA4D1U4 455 aa21.44■■□□□ 1.02
VCPKMT-202ENST00000395860 FBXO21O94952 628 aa21.44■■□□□ 1.02
VCPKMT-202ENST00000395860 GPD1P21695 349 aa21.44■■□□□ 1.02
VCPKMT-202ENST00000395860 MAGEA10P43363 369 aaPredicted RBP21.44■■□□□ 1.02
VCPKMT-202ENST00000395860 MRPS5P82675 430 aaKnown RBP21.44■■□□□ 1.02
VCPKMT-202ENST00000395860 TAF5Q15542 800 aa21.44■■□□□ 1.02
VCPKMT-202ENST00000395860 EFHC1Q5JVL4 640 aa21.44■■□□□ 1.02
VCPKMT-202ENST00000395860 C9orf50Q5SZB4 431 aa21.44■■□□□ 1.02
VCPKMT-202ENST00000395860 SLC8B1Q6J4K2 584 aa21.44■■□□□ 1.02
VCPKMT-202ENST00000395860 VSTM1Q6UX27 236 aa21.44■■□□□ 1.02
VCPKMT-202ENST00000395860 SLC26A9Q7LBE3 791 aa21.44■■□□□ 1.02
VCPKMT-202ENST00000395860 UBL4BQ8N7F7 174 aa21.44■■□□□ 1.02
VCPKMT-202ENST00000395860 SPPL2BQ8TCT7 592 aa21.44■■□□□ 1.02
VCPKMT-202ENST00000395860 STK39Q9UEW8 545 aa21.44■■□□□ 1.02
VCPKMT-202ENST00000395860 MTMR11A4FU01 709 aa21.43■■□□□ 1.02
VCPKMT-202ENST00000395860 KCNK3O14649 394 aa21.43■■□□□ 1.02
VCPKMT-202ENST00000395860 RIOK3O14730 519 aaKnown RBP21.43■■□□□ 1.02
VCPKMT-202ENST00000395860 RPL17P18621 184 aaKnown RBP21.43■■□□□ 1.02
VCPKMT-202ENST00000395860 NDUFV1P49821 464 aa21.43■■□□□ 1.02
VCPKMT-202ENST00000395860 ADCY1Q08828 1119 aa21.43■■□□□ 1.02
VCPKMT-202ENST00000395860 RNF19BQ6ZMZ0 732 aa21.43■■□□□ 1.02
VCPKMT-202ENST00000395860 ATAD1Q8NBU5 361 aa21.43■■□□□ 1.02
VCPKMT-202ENST00000395860 C2orf15Q8WU43 125 aaKnown RBP21.43■■□□□ 1.02
VCPKMT-202ENST00000395860 CD101Q93033 1021 aa21.43■■□□□ 1.02
VCPKMT-202ENST00000395860 CAPZA3Q96KX2 299 aa21.43■■□□□ 1.02
VCPKMT-202ENST00000395860 RNPC3Q96LT9 517 aaKnown RBP21.43■■□□□ 1.02
VCPKMT-202ENST00000395860 ULBP1Q9BZM6 244 aa21.43■■□□□ 1.02
VCPKMT-202ENST00000395860 CNGB3Q9NQW8 809 aa21.43■■□□□ 1.02
VCPKMT-202ENST00000395860 MYO16Q9Y6X6 1858 aa21.43■■□□□ 1.02
VCPKMT-202ENST00000395860 C2CD4BA6NLJ0 364 aa21.43■■□□□ 1.02
VCPKMT-202ENST00000395860 TRIM66O15016 1216 aa21.43■■□□□ 1.02
VCPKMT-202ENST00000395860 ZNF185O15231 689 aa21.43■■□□□ 1.02
VCPKMT-202ENST00000395860 DDX3YO15523 660 aaKnown RBP21.43■■□□□ 1.02
VCPKMT-202ENST00000395860 PDGFRAP16234 1089 aa21.43■■□□□ 1.02
VCPKMT-202ENST00000395860 OR1D2P34982 312 aa21.43■■□□□ 1.02
VCPKMT-202ENST00000395860 SSR1P43307 286 aaKnown RBP21.43■■□□□ 1.02
VCPKMT-202ENST00000395860 MAGEA11P43364 429 aa21.43■■□□□ 1.02
VCPKMT-202ENST00000395860 ROR1Q01973 937 aa21.43■■□□□ 1.02
VCPKMT-202ENST00000395860 DAB2IPQ5VWQ8 1189 aa21.43■■□□□ 1.02
VCPKMT-202ENST00000395860 NIPA2Q8N8Q9 360 aa21.43■■□□□ 1.02
VCPKMT-202ENST00000395860 KLHL23Q8NBE8 558 aa21.43■■□□□ 1.02
VCPKMT-202ENST00000395860 COG1Q8WTW3 980 aa21.43■■□□□ 1.02
VCPKMT-202ENST00000395860 RXFP2Q8WXD0 754 aa21.43■■□□□ 1.02
VCPKMT-202ENST00000395860 KHSRPQ92945 711 aaKnown RBP eCLIP21.43■■□□□ 1.021e-6■■□□□ 11.9
VCPKMT-202ENST00000395860 CCDC66A2RUB6 948 aa21.42■■□□□ 1.02
VCPKMT-202ENST00000395860 ADAM12O43184 909 aa21.42■■□□□ 1.02
VCPKMT-202ENST00000395860 CTNNA2P26232 953 aa21.42■■□□□ 1.02
VCPKMT-202ENST00000395860 CTNNA1P35221 906 aaKnown RBP21.42■■□□□ 1.02
VCPKMT-202ENST00000395860 FLT3P36888 993 aa21.42■■□□□ 1.02
VCPKMT-202ENST00000395860 ZNF143P52747 638 aaPredicted RBP21.42■■□□□ 1.02
VCPKMT-202ENST00000395860 WHAMMP3Q1A5X7 153 aa21.42■■□□□ 1.02
VCPKMT-202ENST00000395860 CC2D1AQ6P1N0 951 aaPredicted RBP21.42■■□□□ 1.02
VCPKMT-202ENST00000395860 NDRG1Q92597 394 aaKnown RBP21.42■■□□□ 1.02
VCPKMT-202ENST00000395860 FAM149B1Q96BN6 582 aa21.42■■□□□ 1.02
VCPKMT-202ENST00000395860 MRPL17Q9NRX2 175 aaKnown RBP21.42■■□□□ 1.02
VCPKMT-202ENST00000395860 WDR27A2RRH5 827 aa21.41■■□□□ 1.02
VCPKMT-202ENST00000395860 SART1O43290 800 aaKnown RBP21.41■■□□□ 1.02
VCPKMT-202ENST00000395860 HSF2BPO75031 334 aa21.41■■□□□ 1.02
VCPKMT-202ENST00000395860 USP17L7P0C7H9 530 aa21.41■■□□□ 1.02
VCPKMT-202ENST00000395860 DNAJB2P25686 324 aa21.41■■□□□ 1.02
VCPKMT-202ENST00000395860 CTNNB1P35222 781 aa21.41■■□□□ 1.02
VCPKMT-202ENST00000395860 DAOAP59103 153 aa21.41■■□□□ 1.02
VCPKMT-202ENST00000395860 TRNP1Q6NT89 227 aa21.41■■□□□ 1.02
VCPKMT-202ENST00000395860 ARCQ7LC44 396 aa21.41■■□□□ 1.02
VCPKMT-202ENST00000395860 KRT35Q92764 455 aa21.41■■□□□ 1.02
VCPKMT-202ENST00000395860 PBKQ96KB5 322 aa21.41■■□□□ 1.02
VCPKMT-202ENST00000395860 C8orf48Q96LL4 319 aa21.41■■□□□ 1.02
VCPKMT-202ENST00000395860 CLSTN3Q9BQT9 956 aa21.41■■□□□ 1.02
VCPKMT-202ENST00000395860 ASNSD1Q9NWL6 643 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms