RNA–Protein interactions for RNA: ENST00000395795.5

CXCL12-206, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 404 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-206ENST00000395795 HLA-DRAP01903 254 aa17.2■□□□□ 0.34
CXCL12-206ENST00000395795 CKMP06732 381 aa17.2■□□□□ 0.34
CXCL12-206ENST00000395795 PFKLP17858 780 aa17.2■□□□□ 0.34
CXCL12-206ENST00000395795 SRSF5Q13243 272 aaKnown RBP17.2■□□□□ 0.34
CXCL12-206ENST00000395795 ORC1Q13415 861 aa17.2■□□□□ 0.34
CXCL12-206ENST00000395795 CEP135Q66GS9 1140 aa17.2■□□□□ 0.34
CXCL12-206ENST00000395795 ACOT1Q86TX2 421 aa17.2■□□□□ 0.34
CXCL12-206ENST00000395795 SMYD4Q8IYR2 804 aaPredicted RBP17.2■□□□□ 0.34
CXCL12-206ENST00000395795 SCAMP5Q8TAC9 235 aa17.2■□□□□ 0.34
CXCL12-206ENST00000395795 TAS1R2Q8TE23 839 aa17.2■□□□□ 0.34
CXCL12-206ENST00000395795 WHAMMQ8TF30 809 aa17.2■□□□□ 0.34
CXCL12-206ENST00000395795 SMOQ99835 787 aa17.2■□□□□ 0.34
CXCL12-206ENST00000395795 PARD6AQ9NPB6 346 aa17.2■□□□□ 0.34
CXCL12-206ENST00000395795 DUS2Q9NX74 493 aaKnown RBP17.2■□□□□ 0.34
CXCL12-206ENST00000395795 TRPM5Q9NZQ8 1165 aa17.2■□□□□ 0.34
CXCL12-206ENST00000395795 FRYLO94915 3013 aa17.2■□□□□ 0.34
CXCL12-206ENST00000395795 WDR87Q6ZQQ6 2873 aa17.19■□□□□ 0.34
CXCL12-206ENST00000395795 ATG2BQ96BY7 2078 aa17.19■□□□□ 0.34
CXCL12-206ENST00000395795 LEFTY2O00292 366 aa17.19■□□□□ 0.34
CXCL12-206ENST00000395795 ZDHHC11BP0C7U3 371 aa17.19■□□□□ 0.34
CXCL12-206ENST00000395795 TRIM49P0CI25 452 aa17.19■□□□□ 0.34
CXCL12-206ENST00000395795 TRIM49CP0CI26 452 aa17.19■□□□□ 0.34
CXCL12-206ENST00000395795 NR2F2P24468 414 aa17.19■□□□□ 0.34
CXCL12-206ENST00000395795 OPRD1P41143 372 aa17.19■□□□□ 0.34
CXCL12-206ENST00000395795 VAMP7P51809 220 aa17.19■□□□□ 0.34
CXCL12-206ENST00000395795 SGSM1Q2NKQ1 1148 aa17.19■□□□□ 0.34
CXCL12-206ENST00000395795 SNX30Q5VWJ9 437 aa17.19■□□□□ 0.34
CXCL12-206ENST00000395795 CSNK1G1Q9HCP0 422 aa17.19■□□□□ 0.34
CXCL12-206ENST00000395795 DNAH14Q0VDD8 3507 aa17.19■□□□□ 0.34
CXCL12-206ENST00000395795 HHLA1C9JL84 531 aa17.18■□□□□ 0.34
CXCL12-206ENST00000395795 CALUO43852 315 aaPredicted RBP17.18■□□□□ 0.34
CXCL12-206ENST00000395795 CCDC130P13994 396 aa17.18■□□□□ 0.34
CXCL12-206ENST00000395795 ANXA13P27216 316 aa17.18■□□□□ 0.34
CXCL12-206ENST00000395795 PPP3CCP48454 512 aa17.18■□□□□ 0.34
CXCL12-206ENST00000395795 GCLMP48507 274 aa17.18■□□□□ 0.34
CXCL12-206ENST00000395795 NDST1P52848 882 aa17.18■□□□□ 0.34
CXCL12-206ENST00000395795 NRLP54845 237 aa17.18■□□□□ 0.34
CXCL12-206ENST00000395795 ENPEPQ07075 957 aa17.18■□□□□ 0.34
CXCL12-206ENST00000395795 INCA1Q0VD86 236 aa17.18■□□□□ 0.34
CXCL12-206ENST00000395795 MESP2Q0VG99 397 aa17.18■□□□□ 0.34
CXCL12-206ENST00000395795 PNOCQ13519 176 aa17.18■□□□□ 0.34
CXCL12-206ENST00000395795 CC2D1AQ6P1N0 951 aaPredicted RBP17.18■□□□□ 0.34
CXCL12-206ENST00000395795 NUP93Q8N1F7 819 aa17.18■□□□□ 0.34
CXCL12-206ENST00000395795 C12orf29Q8N999 325 aa17.18■□□□□ 0.34
CXCL12-206ENST00000395795 SPATA20Q8TB22 786 aa17.18■□□□□ 0.34
CXCL12-206ENST00000395795 TAF4BQ92750 862 aa17.18■□□□□ 0.34
CXCL12-206ENST00000395795 WBP2Q969T9 261 aa17.18■□□□□ 0.34
CXCL12-206ENST00000395795 ATP6V1DQ9Y5K8 247 aa17.18■□□□□ 0.34
CXCL12-206ENST00000395795 KIAA1549LQ6ZVL6 1849 aa17.18■□□□□ 0.34
CXCL12-206ENST00000395795 CACNA1AO00555 2505 aa17.18■□□□□ 0.34
CXCL12-206ENST00000395795 MYO16Q9Y6X6 1858 aa17.18■□□□□ 0.34
CXCL12-206ENST00000395795 RNF40O75150 1001 aa17.17■□□□□ 0.34
CXCL12-206ENST00000395795 YWHAQP27348 245 aa17.17■□□□□ 0.34
CXCL12-206ENST00000395795 ID4P47928 161 aa17.17■□□□□ 0.34
CXCL12-206ENST00000395795 SLC5A3P53794 718 aa17.17■□□□□ 0.34
CXCL12-206ENST00000395795 GPRIN1Q7Z2K8 1008 aa17.17■□□□□ 0.34
CXCL12-206ENST00000395795 LONP2Q86WA8 852 aa17.17■□□□□ 0.34
CXCL12-206ENST00000395795 ZC3H3Q8IXZ2 948 aaKnown RBP17.17■□□□□ 0.34
CXCL12-206ENST00000395795 ADGRG2Q8IZP9 1017 aa17.17■□□□□ 0.34
CXCL12-206ENST00000395795 CPA6Q8N4T0 437 aa17.17■□□□□ 0.34
CXCL12-206ENST00000395795 KIAA1958Q8N8K9 716 aa17.17■□□□□ 0.34
CXCL12-206ENST00000395795 SEMA4DQ92854 862 aa17.17■□□□□ 0.34
CXCL12-206ENST00000395795 EEF2KMTQ96G04 330 aa17.17■□□□□ 0.34
CXCL12-206ENST00000395795 P2RY13Q9BPV8 354 aa17.17■□□□□ 0.34
CXCL12-206ENST00000395795 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.17■□□□□ 0.34
CXCL12-206ENST00000395795 KRT82Q9NSB4 513 aa17.17■□□□□ 0.34
CXCL12-206ENST00000395795 FRMD4BQ9Y2L6 1034 aa17.17■□□□□ 0.34
CXCL12-206ENST00000395795 CPQQ9Y646 472 aa17.17■□□□□ 0.34
CXCL12-206ENST00000395795 SCAMP3O14828 347 aaKnown RBP17.16■□□□□ 0.34
CXCL12-206ENST00000395795 COCHO43405 550 aa17.16■□□□□ 0.34
CXCL12-206ENST00000395795 GREM1O60565 184 aa17.16■□□□□ 0.34
CXCL12-206ENST00000395795 CYP17A1P05093 508 aa17.16■□□□□ 0.34
CXCL12-206ENST00000395795 IFNAR2P48551 515 aa17.16■□□□□ 0.34
CXCL12-206ENST00000395795 PMS1P54277 932 aaKnown RBP17.16■□□□□ 0.34
CXCL12-206ENST00000395795 GRSF1Q12849 480 aaKnown RBP eCLIP17.16■□□□□ 0.34
CXCL12-206ENST00000395795 ADAM9Q13443 819 aa17.16■□□□□ 0.34
CXCL12-206ENST00000395795 LPAL2Q16609 132 aa17.16■□□□□ 0.34
CXCL12-206ENST00000395795 EDRF1Q3B7T1 1238 aa17.16■□□□□ 0.34
CXCL12-206ENST00000395795 HEATR6Q6AI08 1181 aaKnown RBP17.16■□□□□ 0.34
CXCL12-206ENST00000395795 INTS8Q75QN2 995 aaKnown RBP17.16■□□□□ 0.34
CXCL12-206ENST00000395795 WDR5BQ86VZ2 330 aa17.16■□□□□ 0.34
CXCL12-206ENST00000395795 UNC93AQ86WB7 457 aa17.16■□□□□ 0.34
CXCL12-206ENST00000395795 SFTPA1Q8IWL2 248 aa17.16■□□□□ 0.34
CXCL12-206ENST00000395795 FAM186BQ8IYM0 893 aa17.16■□□□□ 0.34
CXCL12-206ENST00000395795 SLC2A14Q8TDB8 520 aa17.16■□□□□ 0.34
CXCL12-206ENST00000395795 OVCA2Q8WZ82 227 aa17.16■□□□□ 0.34
CXCL12-206ENST00000395795 ATP2A3Q93084 1043 aa17.16■□□□□ 0.34
CXCL12-206ENST00000395795 SMARCD1Q96GM5 515 aa17.16■□□□□ 0.34
CXCL12-206ENST00000395795 TNIP3Q96KP6 325 aa17.16■□□□□ 0.34
CXCL12-206ENST00000395795 DMAP1Q9NPF5 467 aaPredicted RBP17.16■□□□□ 0.34
CXCL12-206ENST00000395795 SMPD4Q9NXE4 827 aa17.16■□□□□ 0.34
CXCL12-206ENST00000395795 DLL3Q9NYJ7 618 aa17.16■□□□□ 0.34
CXCL12-206ENST00000395795 CHORDC1Q9UHD1 332 aaPredicted RBP17.16■□□□□ 0.34
CXCL12-206ENST00000395795 CILPO75339 1184 aa17.15■□□□□ 0.34
CXCL12-206ENST00000395795 AP1G2O75843 785 aa17.15■□□□□ 0.34
CXCL12-206ENST00000395795 RTN3O95197 1032 aaPredicted RBP17.15■□□□□ 0.34
CXCL12-206ENST00000395795 DRD1P21728 446 aa17.15■□□□□ 0.34
CXCL12-206ENST00000395795 PSMC2P35998 433 aaKnown RBP17.15■□□□□ 0.34
CXCL12-206ENST00000395795 PIK3CAP42336 1068 aa17.15■□□□□ 0.34
CXCL12-206ENST00000395795 PRCPP42785 496 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms