RNA–Protein interactions for RNA: ENST00000395358.7

RAPGEF3-202, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 4,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-202ENST00000395358 TCEA1P23193 301 aaKnown RBP11.8□□□□□ -0.52
RAPGEF3-202ENST00000395358 UBXN2AP68543 259 aa11.8□□□□□ -0.52
RAPGEF3-202ENST00000395358 TTI2Q6NXR4 508 aa11.8□□□□□ -0.52
RAPGEF3-202ENST00000395358 CLNKQ7Z7G1 428 aa11.8□□□□□ -0.52
RAPGEF3-202ENST00000395358 GRK7Q8WTQ7 553 aa11.8□□□□□ -0.52
RAPGEF3-202ENST00000395358 GTF3C2Q8WUA4 911 aaPredicted RBP11.8□□□□□ -0.52
RAPGEF3-202ENST00000395358 C18orf8Q96DM3 657 aa11.8□□□□□ -0.52
RAPGEF3-202ENST00000395358 NRBF2Q96F24 287 aa11.8□□□□□ -0.52
RAPGEF3-202ENST00000395358 STMN3Q9NZ72 180 aa11.8□□□□□ -0.52
RAPGEF3-202ENST00000395358 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.8□□□□□ -0.52
RAPGEF3-202ENST00000395358 PCDHA6Q9UN73 950 aa11.8□□□□□ -0.52
RAPGEF3-202ENST00000395358 NAALADL1Q9UQQ1 740 aa11.8□□□□□ -0.52
RAPGEF3-202ENST00000395358 AP4S1Q9Y587 144 aa11.8□□□□□ -0.52
RAPGEF3-202ENST00000395358 PCDHA8Q9Y5H6 950 aa11.8□□□□□ -0.52
RAPGEF3-202ENST00000395358 FCHO1O14526 889 aa11.8□□□□□ -0.52
RAPGEF3-202ENST00000395358 PJA2O43164 708 aa11.8□□□□□ -0.52
RAPGEF3-202ENST00000395358 ASNA1O43681 348 aa11.8□□□□□ -0.52
RAPGEF3-202ENST00000395358 STT3AP46977 705 aa11.8□□□□□ -0.52
RAPGEF3-202ENST00000395358 RAB15P59190 212 aa11.8□□□□□ -0.52
RAPGEF3-202ENST00000395358 NCOA4Q13772 614 aa11.8□□□□□ -0.52
RAPGEF3-202ENST00000395358 TSPAN14Q8NG11 270 aa11.8□□□□□ -0.52
RAPGEF3-202ENST00000395358 SPOCK2Q92563 424 aa11.8□□□□□ -0.52
RAPGEF3-202ENST00000395358 PARK7Q99497 189 aaKnown RBP11.8□□□□□ -0.52
RAPGEF3-202ENST00000395358 PHF20Q9BVI0 1012 aa11.8□□□□□ -0.52
RAPGEF3-202ENST00000395358 SPC25Q9HBM1 224 aa11.8□□□□□ -0.52
RAPGEF3-202ENST00000395358 SYNGAP1Q96PV0 1343 aa11.8□□□□□ -0.52
RAPGEF3-202ENST00000395358 KRT7P08729 469 aa11.8□□□□□ -0.52
RAPGEF3-202ENST00000395358 AQP4P55087 323 aa11.8□□□□□ -0.52
RAPGEF3-202ENST00000395358 TAF1CQ15572 869 aaPredicted RBP11.8□□□□□ -0.52
RAPGEF3-202ENST00000395358 ARHGAP44Q17R89 818 aa11.8□□□□□ -0.52
RAPGEF3-202ENST00000395358 MOB2Q70IA6 237 aa11.8□□□□□ -0.52
RAPGEF3-202ENST00000395358 FRA10AC1Q70Z53 315 aa11.8□□□□□ -0.52
RAPGEF3-202ENST00000395358 GALNT6Q8NCL4 622 aa11.8□□□□□ -0.52
RAPGEF3-202ENST00000395358 TAMM41Q96BW9 452 aa11.8□□□□□ -0.52
RAPGEF3-202ENST00000395358 CFAP36Q96G28 342 aa11.8□□□□□ -0.52
RAPGEF3-202ENST00000395358 CITED4Q96RK1 184 aa11.8□□□□□ -0.52
RAPGEF3-202ENST00000395358 KLF6Q99612 283 aaPredicted RBP11.8□□□□□ -0.52
RAPGEF3-202ENST00000395358 TMEM120AQ9BXJ8 343 aa11.8□□□□□ -0.52
RAPGEF3-202ENST00000395358 TRPV6Q9H1D0 765 aa11.8□□□□□ -0.52
RAPGEF3-202ENST00000395358 DISC1Q9NRI5 854 aa11.8□□□□□ -0.52
RAPGEF3-202ENST00000395358 SEPT10Q9P0V9 454 aa11.8□□□□□ -0.52
RAPGEF3-202ENST00000395358 DIS3Q9Y2L1 958 aaKnown RBP11.8□□□□□ -0.52
RAPGEF3-202ENST00000395358 CAPN8A6NHC0 703 aa11.79□□□□□ -0.52
RAPGEF3-202ENST00000395358 MYL2P10916 166 aa11.79□□□□□ -0.52
RAPGEF3-202ENST00000395358 EIF2AK2P19525 551 aaKnown RBP11.79□□□□□ -0.52
RAPGEF3-202ENST00000395358 TOB1P50616 345 aaPredicted RBP11.79□□□□□ -0.52
RAPGEF3-202ENST00000395358 TRAF2Q12933 501 aa11.79□□□□□ -0.52
RAPGEF3-202ENST00000395358 ARHGEF6Q15052 776 aa11.79□□□□□ -0.52
RAPGEF3-202ENST00000395358 ANKMY2Q8IV38 441 aa11.79□□□□□ -0.52
RAPGEF3-202ENST00000395358 PALM2Q8IXS6 379 aa11.79□□□□□ -0.52
RAPGEF3-202ENST00000395358 CENPSQ8N2Z9 138 aa11.79□□□□□ -0.52
RAPGEF3-202ENST00000395358 GOLM1Q8NBJ4 401 aa11.79□□□□□ -0.52
RAPGEF3-202ENST00000395358 CLPTM1LQ96KA5 538 aa11.79□□□□□ -0.52
RAPGEF3-202ENST00000395358 RMDN3Q96TC7 470 aa11.79□□□□□ -0.52
RAPGEF3-202ENST00000395358 INIPQ9NRY2 104 aa11.79□□□□□ -0.52
RAPGEF3-202ENST00000395358 FAM217BQ9NTX9 383 aaPredicted RBP11.79□□□□□ -0.52
RAPGEF3-202ENST00000395358 MYH13Q9UKX3 1938 aa11.79□□□□□ -0.52
RAPGEF3-202ENST00000395358 USP2O75604 605 aaPredicted RBP11.79□□□□□ -0.52
RAPGEF3-202ENST00000395358 SEMA3DO95025 777 aa11.79□□□□□ -0.52
RAPGEF3-202ENST00000395358 EYA4O95677 639 aa11.79□□□□□ -0.52
RAPGEF3-202ENST00000395358 KRT6CP48668 564 aa11.79□□□□□ -0.52
RAPGEF3-202ENST00000395358 ACVR2BQ13705 512 aa11.79□□□□□ -0.52
RAPGEF3-202ENST00000395358 EDRF1Q3B7T1 1238 aa11.79□□□□□ -0.52
RAPGEF3-202ENST00000395358 TKFCQ3LXA3 575 aa11.79□□□□□ -0.52
RAPGEF3-202ENST00000395358 FIGNQ5HY92 759 aa11.79□□□□□ -0.52
RAPGEF3-202ENST00000395358 SPDYCQ5MJ68 293 aa11.79□□□□□ -0.52
RAPGEF3-202ENST00000395358 AMIGO2Q86SJ2 522 aa11.79□□□□□ -0.52
RAPGEF3-202ENST00000395358 SCFD2Q8WU76 684 aa11.79□□□□□ -0.52
RAPGEF3-202ENST00000395358 TTC25Q96NG3 672 aa11.79□□□□□ -0.52
RAPGEF3-202ENST00000395358 SERPINI1Q99574 410 aa11.79□□□□□ -0.52
RAPGEF3-202ENST00000395358 WWP1Q9H0M0 922 aa11.79□□□□□ -0.52
RAPGEF3-202ENST00000395358 DDX39AO00148 427 aaKnown RBP11.79□□□□□ -0.52
RAPGEF3-202ENST00000395358 CYP1A1P04798 512 aaPredicted RBP11.79□□□□□ -0.52
RAPGEF3-202ENST00000395358 FCER1AP12319 257 aa11.79□□□□□ -0.52
RAPGEF3-202ENST00000395358 TCF7P36402 384 aaPredicted RBP11.79□□□□□ -0.52
RAPGEF3-202ENST00000395358 VCPP55072 806 aaKnown RBP11.79□□□□□ -0.52
RAPGEF3-202ENST00000395358 PPIL2Q13356 520 aa11.79□□□□□ -0.52
RAPGEF3-202ENST00000395358 GIT2Q14161 759 aa11.79□□□□□ -0.52
RAPGEF3-202ENST00000395358 ARL6IP4Q66PJ3 421 aaKnown RBP11.79□□□□□ -0.52
RAPGEF3-202ENST00000395358 CENPUQ71F23 418 aa11.79□□□□□ -0.52
RAPGEF3-202ENST00000395358 CRLF3Q8IUI8 442 aa11.79□□□□□ -0.52
RAPGEF3-202ENST00000395358 TAB3Q8N5C8 712 aaPredicted RBP11.79□□□□□ -0.52
RAPGEF3-202ENST00000395358 TNIP2Q8NFZ5 429 aa11.79□□□□□ -0.52
RAPGEF3-202ENST00000395358 DUSP9Q99956 384 aaKnown RBP11.79□□□□□ -0.52
RAPGEF3-202ENST00000395358 KCNMB3Q9NPA1 279 aa11.79□□□□□ -0.52
RAPGEF3-202ENST00000395358 COL4A3BPQ9Y5P4 624 aa11.79□□□□□ -0.52
RAPGEF3-202ENST00000395358 A0A087X0B3 334 aa11.78□□□□□ -0.52
RAPGEF3-202ENST00000395358 TNPO2O14787 897 aaKnown RBP11.78□□□□□ -0.52
RAPGEF3-202ENST00000395358 IDH3BO43837 385 aa11.78□□□□□ -0.52
RAPGEF3-202ENST00000395358 SIN3BO75182 1162 aa11.78□□□□□ -0.52
RAPGEF3-202ENST00000395358 NR4A1P22736 598 aa11.78□□□□□ -0.52
RAPGEF3-202ENST00000395358 TECP42680 631 aa11.78□□□□□ -0.52
RAPGEF3-202ENST00000395358 SREBF2Q12772 1141 aa11.78□□□□□ -0.52
RAPGEF3-202ENST00000395358 DLG1Q12959 904 aa11.78□□□□□ -0.52
RAPGEF3-202ENST00000395358 MSLNQ13421 630 aaPredicted RBP11.78□□□□□ -0.52
RAPGEF3-202ENST00000395358 NET1Q7Z628 596 aaPredicted RBP11.78□□□□□ -0.52
RAPGEF3-202ENST00000395358 SIX6OS1Q8N1H7 587 aa11.78□□□□□ -0.52
RAPGEF3-202ENST00000395358 ZNF786Q8N393 782 aa11.78□□□□□ -0.52
RAPGEF3-202ENST00000395358 NRG4Q8WWG1 115 aa11.78□□□□□ -0.52
RAPGEF3-202ENST00000395358 RNPEPQ9H4A4 650 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms