RNA–Protein interactions for RNA: ENST00000394991.7

SNCA-205, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-205ENST00000394991 CPQQ9Y646 472 aa16.93■□□□□ 0.3
SNCA-205ENST00000394991 PTPRBP23467 1997 aa16.93■□□□□ 0.3
SNCA-205ENST00000394991 GCN1Q92616 2671 aaKnown RBP16.93■□□□□ 0.3
SNCA-205ENST00000394991 TCRBV21S2A2A0A5A6 115 aa16.92■□□□□ 0.3
SNCA-205ENST00000394991 ZNF840PA6NDX5 716 aa16.92■□□□□ 0.3
SNCA-205ENST00000394991 MYMKA6NI61 221 aa16.92■□□□□ 0.3
SNCA-205ENST00000394991 APODP05090 189 aa16.92■□□□□ 0.3
SNCA-205ENST00000394991 KRT19P08727 400 aa16.92■□□□□ 0.3
SNCA-205ENST00000394991 PFKLP17858 780 aa16.92■□□□□ 0.3
SNCA-205ENST00000394991 BDNFP23560 247 aa16.92■□□□□ 0.3
SNCA-205ENST00000394991 LMO2P25791 158 aa16.92■□□□□ 0.3
SNCA-205ENST00000394991 PDE6CP51160 858 aa16.92■□□□□ 0.3
SNCA-205ENST00000394991 RESTQ13127 1097 aa16.92■□□□□ 0.3
SNCA-205ENST00000394991 POSTNQ15063 836 aa16.92■□□□□ 0.3
SNCA-205ENST00000394991 HSF5Q4G112 596 aaPredicted RBP16.92■□□□□ 0.3
SNCA-205ENST00000394991 SPDYCQ5MJ68 293 aa16.92■□□□□ 0.3
SNCA-205ENST00000394991 EOGTQ5NDL2 527 aa16.92■□□□□ 0.3
SNCA-205ENST00000394991 LMBRD2Q68DH5 695 aaPredicted RBP16.92■□□□□ 0.3
SNCA-205ENST00000394991 RHBDF2Q6PJF5 856 aa16.92■□□□□ 0.3
SNCA-205ENST00000394991 C4orf50Q6ZRC1 276 aa16.92■□□□□ 0.3
SNCA-205ENST00000394991 LIMS2Q7Z4I7 341 aa16.92■□□□□ 0.3
SNCA-205ENST00000394991 PHTF2Q8N3S3 785 aa16.92■□□□□ 0.3
SNCA-205ENST00000394991 OR2I1PQ8NGU4 316 aa16.92■□□□□ 0.3
SNCA-205ENST00000394991 TTLL2Q9BWV7 592 aa16.92■□□□□ 0.3
SNCA-205ENST00000394991 GTPBP2Q9BX10 602 aaKnown RBP16.92■□□□□ 0.3
SNCA-205ENST00000394991 MTMR12Q9C0I1 747 aa16.92■□□□□ 0.3
SNCA-205ENST00000394991 CAPN10Q9HC96 672 aa16.92■□□□□ 0.3
SNCA-205ENST00000394991 ARHGEF4Q9NR80 690 aa16.92■□□□□ 0.3
SNCA-205ENST00000394991 SMPD4Q9NXE4 827 aa16.92■□□□□ 0.3
SNCA-205ENST00000394991 RBAKQ9NYW8 714 aaPredicted RBP16.92■□□□□ 0.3
SNCA-205ENST00000394991 TRPM5Q9NZQ8 1165 aa16.92■□□□□ 0.3
SNCA-205ENST00000394991 MAGEC2Q9UBF1 373 aaPredicted RBP16.92■□□□□ 0.3
SNCA-205ENST00000394991 SLC6A14Q9UN76 642 aa16.92■□□□□ 0.3
SNCA-205ENST00000394991 A0A0A0MRY4 1105 aa16.91■□□□□ 0.3
SNCA-205ENST00000394991 GOLGA8IPA6NC78 632 aa16.91■□□□□ 0.3
SNCA-205ENST00000394991 GOLGA8JA6NMD2 632 aa16.91■□□□□ 0.3
SNCA-205ENST00000394991 HOXD12P35452 270 aa16.91■□□□□ 0.3
SNCA-205ENST00000394991 EIF2DP41214 584 aaKnown RBP16.91■□□□□ 0.3
SNCA-205ENST00000394991 DPP6P42658 865 aa16.91■□□□□ 0.3
SNCA-205ENST00000394991 DUOXA1Q1HG43 343 aa16.91■□□□□ 0.3
SNCA-205ENST00000394991 VSTM1Q6UX27 236 aa16.91■□□□□ 0.3
SNCA-205ENST00000394991 DENND5BQ6ZUT9 1274 aa16.91■□□□□ 0.3
SNCA-205ENST00000394991 DYMQ7RTS9 669 aa16.91■□□□□ 0.3
SNCA-205ENST00000394991 RAB44Q7Z6P3 723 aaPredicted RBP16.91■□□□□ 0.3
SNCA-205ENST00000394991 PROSER1Q86XN7 944 aa16.91■□□□□ 0.3
SNCA-205ENST00000394991 DEFB119Q8N690 84 aa16.91■□□□□ 0.3
SNCA-205ENST00000394991 KIAA1958Q8N8K9 716 aa16.91■□□□□ 0.3
SNCA-205ENST00000394991 CACTINQ8WUQ7 758 aaKnown RBP16.91■□□□□ 0.3
SNCA-205ENST00000394991 PDE11AQ9HCR9 933 aa16.91■□□□□ 0.3
SNCA-205ENST00000394991 CFAP97Q9P2B7 532 aa16.91■□□□□ 0.3
SNCA-205ENST00000394991 PTPRJQ12913 1337 aa16.91■□□□□ 0.3
SNCA-205ENST00000394991 LAMA5O15230 3695 aa16.91■□□□□ 0.3
SNCA-205ENST00000394991 H0Y626 953 aa16.9■□□□□ 0.3
SNCA-205ENST00000394991 TRIM16O95361 564 aa16.9■□□□□ 0.3
SNCA-205ENST00000394991 OAS1P00973 400 aaKnown RBP16.9■□□□□ 0.3
SNCA-205ENST00000394991 ADH5P11766 374 aa16.9■□□□□ 0.3
SNCA-205ENST00000394991 CD59P13987 128 aa16.9■□□□□ 0.3
SNCA-205ENST00000394991 GRIK1P39086 918 aa16.9■□□□□ 0.3
SNCA-205ENST00000394991 RBP5P82980 135 aa16.9■□□□□ 0.3
SNCA-205ENST00000394991 L1TD1Q5T7N2 865 aaKnown RBP16.9■□□□□ 0.3
SNCA-205ENST00000394991 PGBD3Q8N328 593 aa16.9■□□□□ 0.3
SNCA-205ENST00000394991 HDDC3Q8N4P3 179 aa16.9■□□□□ 0.3
SNCA-205ENST00000394991 MINDY1Q8N5J2 469 aa16.9■□□□□ 0.3
SNCA-205ENST00000394991 KRI1Q8N9T8 703 aaKnown RBP16.9■□□□□ 0.3
SNCA-205ENST00000394991 RASSF8Q8NHQ8 419 aa16.9■□□□□ 0.3
SNCA-205ENST00000394991 TMEM30AQ9NV96 361 aa16.9■□□□□ 0.3
SNCA-205ENST00000394991 CDH9Q9ULB4 789 aa16.9■□□□□ 0.3
SNCA-205ENST00000394991 NME7Q9Y5B8 376 aa16.9■□□□□ 0.3
SNCA-205ENST00000394991 SLC9A3R1O14745 358 aaPredicted RBP16.89■□□□□ 0.29
SNCA-205ENST00000394991 OPHN1O60890 802 aa16.89■□□□□ 0.29
SNCA-205ENST00000394991 ADH1CP00326 375 aa16.89■□□□□ 0.29
SNCA-205ENST00000394991 SERPINF2P08697 491 aa16.89■□□□□ 0.29
SNCA-205ENST00000394991 GABRG2P18507 467 aa16.89■□□□□ 0.29
SNCA-205ENST00000394991 DDIT3P35638 169 aa16.89■□□□□ 0.29
SNCA-205ENST00000394991 LONP1P36776 959 aaKnown RBP16.89■□□□□ 0.29
SNCA-205ENST00000394991 GRIA2P42262 883 aa16.89■□□□□ 0.29
SNCA-205ENST00000394991 TNFRSF4P43489 277 aa16.89■□□□□ 0.29
SNCA-205ENST00000394991 CASP5P51878 434 aa16.89■□□□□ 0.29
SNCA-205ENST00000394991 ATXN3P54252 364 aaPredicted RBP16.89■□□□□ 0.29
SNCA-205ENST00000394991 RPL6Q02878 288 aaKnown RBP16.89■□□□□ 0.29
SNCA-205ENST00000394991 GFPT1Q06210 699 aaPredicted RBP16.89■□□□□ 0.29
SNCA-205ENST00000394991 BYSLQ13895 437 aaKnown RBP16.89■□□□□ 0.29
SNCA-205ENST00000394991 LY6G5CQ5SRR4 150 aa16.89■□□□□ 0.29
SNCA-205ENST00000394991 CEP76Q8TAP6 659 aa16.89■□□□□ 0.29
SNCA-205ENST00000394991 PCED1BQ96HM7 432 aa16.89■□□□□ 0.29
SNCA-205ENST00000394991 CEP295NLQ96MC4 621 aa16.89■□□□□ 0.29
SNCA-205ENST00000394991 CAMK1GQ96NX5 476 aa16.89■□□□□ 0.29
SNCA-205ENST00000394991 ACCSQ96QU6 501 aa16.89■□□□□ 0.29
SNCA-205ENST00000394991 CBWD1Q9BRT8 395 aa16.89■□□□□ 0.29
SNCA-205ENST00000394991 TBC1D7Q9P0N9 293 aa16.89■□□□□ 0.29
SNCA-205ENST00000394991 HCN2Q9UL51 889 aa16.89■□□□□ 0.29
SNCA-205ENST00000394991 GPSM3Q9Y4H4 160 aa16.89■□□□□ 0.29
SNCA-205ENST00000394991 F8VP50 259 aa16.88■□□□□ 0.29
SNCA-205ENST00000394991 AP5Z1O43299 807 aa16.88■□□□□ 0.29
SNCA-205ENST00000394991 PDGFRBP09619 1106 aa16.88■□□□□ 0.29
SNCA-205ENST00000394991 TMEM191BP0C7N4 346 aa16.88■□□□□ 0.29
SNCA-205ENST00000394991 GARTP22102 1010 aa16.88■□□□□ 0.29
SNCA-205ENST00000394991 WARSP23381 471 aaKnown RBP16.88■□□□□ 0.29
SNCA-205ENST00000394991 ANXA13P27216 316 aa16.88■□□□□ 0.29
SNCA-205ENST00000394991 CACNA2D1P54289 1103 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms