RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 HMGCRP04035 888 aa16.62■□□□□ 0.25
SMARCD1-202ENST00000394963 PRKAR2AP13861 404 aaKnown RBP16.62■□□□□ 0.25
SMARCD1-202ENST00000394963 ITIH2P19823 946 aa16.62■□□□□ 0.25
SMARCD1-202ENST00000394963 AMPD1P23109 780 aa16.62■□□□□ 0.25
SMARCD1-202ENST00000394963 GAD2Q05329 585 aa16.62■□□□□ 0.25
SMARCD1-202ENST00000394963 PRKCZQ05513 592 aa16.62■□□□□ 0.25
SMARCD1-202ENST00000394963 NLRP14Q86W24 1093 aa16.62■□□□□ 0.25
SMARCD1-202ENST00000394963 ADAM2Q99965 735 aa16.62■□□□□ 0.25
SMARCD1-202ENST00000394963 FERMT1Q9BQL6 677 aa16.62■□□□□ 0.25
SMARCD1-202ENST00000394963 RHOBTB2Q9BYZ6 727 aa16.62■□□□□ 0.25
SMARCD1-202ENST00000394963 IPPQ9Y573 584 aa16.62■□□□□ 0.25
SMARCD1-202ENST00000394963 KCNK1O00180 336 aa16.61■□□□□ 0.25
SMARCD1-202ENST00000394963 EIF3HO15372 352 aaKnown RBP eCLIP16.61■□□□□ 0.25
SMARCD1-202ENST00000394963 PSTPIP1O43586 416 aa16.61■□□□□ 0.25
SMARCD1-202ENST00000394963 INHBAP08476 426 aa16.61■□□□□ 0.25
SMARCD1-202ENST00000394963 CRADDP78560 199 aa16.61■□□□□ 0.25
SMARCD1-202ENST00000394963 TNIP3Q96KP6 325 aa16.61■□□□□ 0.25
SMARCD1-202ENST00000394963 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.61■□□□□ 0.255e-11■■■■□ 21.9
SMARCD1-202ENST00000394963 A0A1B0GUA9 196 aa16.61■□□□□ 0.25
SMARCD1-202ENST00000394963 TMEM120BA0PK00 339 aa16.61■□□□□ 0.25
SMARCD1-202ENST00000394963 THP07101 528 aa16.61■□□□□ 0.25
SMARCD1-202ENST00000394963 MSH2P43246 934 aa16.61■□□□□ 0.25
SMARCD1-202ENST00000394963 FNTAP49354 379 aa16.61■□□□□ 0.25
SMARCD1-202ENST00000394963 PHF13Q86YI8 300 aaPredicted RBP16.61■□□□□ 0.25
SMARCD1-202ENST00000394963 WDTC1Q8N5D0 677 aa16.61■□□□□ 0.25
SMARCD1-202ENST00000394963 ANKS4BQ8N8V4 417 aa16.61■□□□□ 0.25
SMARCD1-202ENST00000394963 BHMTQ93088 406 aa16.61■□□□□ 0.25
SMARCD1-202ENST00000394963 TRMT13Q9NUP7 481 aaKnown RBP16.61■□□□□ 0.25
SMARCD1-202ENST00000394963 STK38LQ9Y2H1 464 aa16.61■□□□□ 0.25
SMARCD1-202ENST00000394963 MANSC4A6NHS7 340 aaPredicted RBP16.61■□□□□ 0.25
SMARCD1-202ENST00000394963 RIPK2O43353 540 aa16.61■□□□□ 0.25
SMARCD1-202ENST00000394963 CILPO75339 1184 aa16.61■□□□□ 0.25
SMARCD1-202ENST00000394963 USP17L7P0C7H9 530 aa16.61■□□□□ 0.25
SMARCD1-202ENST00000394963 IGFBP6P24592 240 aaPredicted RBP16.61■□□□□ 0.25
SMARCD1-202ENST00000394963 GRIK1P39086 918 aa16.61■□□□□ 0.25
SMARCD1-202ENST00000394963 ERFP50548 548 aa16.61■□□□□ 0.25
SMARCD1-202ENST00000394963 FCGRTP55899 365 aa16.61■□□□□ 0.25
SMARCD1-202ENST00000394963 PLEKHA7Q6IQ23 1121 aa16.61■□□□□ 0.25
SMARCD1-202ENST00000394963 CHADLQ6NUI6 762 aa16.61■□□□□ 0.25
SMARCD1-202ENST00000394963 ANKS1BQ7Z6G8 1248 aa16.61■□□□□ 0.25
SMARCD1-202ENST00000394963 KIF9Q9HAQ2 790 aa16.61■□□□□ 0.25
SMARCD1-202ENST00000394963 DDIT4Q9NX09 232 aa16.61■□□□□ 0.25
SMARCD1-202ENST00000394963 ITGA11Q9UKX5 1188 aa16.61■□□□□ 0.25
SMARCD1-202ENST00000394963 TPX2Q9ULW0 747 aaKnown RBP16.61■□□□□ 0.25
SMARCD1-202ENST00000394963 NT5C1B-RDH14C9J2C7 533 aa16.6■□□□□ 0.25
SMARCD1-202ENST00000394963 USP12O75317 370 aa16.6■□□□□ 0.25
SMARCD1-202ENST00000394963 OR4Q2P0C623 313 aa16.6■□□□□ 0.25
SMARCD1-202ENST00000394963 PTGISQ16647 500 aa16.6■□□□□ 0.25
SMARCD1-202ENST00000394963 C15orf39Q6ZRI6 1047 aa16.6■□□□□ 0.25
SMARCD1-202ENST00000394963 PID1Q7Z2X4 250 aa16.6■□□□□ 0.25
SMARCD1-202ENST00000394963 METTL23Q86XA0 190 aa16.6■□□□□ 0.25
SMARCD1-202ENST00000394963 UNC45BQ8IWX7 931 aa16.6■□□□□ 0.25
SMARCD1-202ENST00000394963 DEFB106AQ8N104 65 aa16.6■□□□□ 0.25
SMARCD1-202ENST00000394963 PYROXD2Q8N2H3 581 aa16.6■□□□□ 0.25
SMARCD1-202ENST00000394963 TTC17Q96AE7 1141 aa16.6■□□□□ 0.25
SMARCD1-202ENST00000394963 SMC6Q96SB8 1091 aa16.6■□□□□ 0.25
SMARCD1-202ENST00000394963 SYT11Q9BT88 431 aa16.6■□□□□ 0.25
SMARCD1-202ENST00000394963 KATNAL1Q9BW62 490 aa16.6■□□□□ 0.25
SMARCD1-202ENST00000394963 ADGRA2Q96PE1 1338 aa16.6■□□□□ 0.25
SMARCD1-202ENST00000394963 CPP00450 1065 aa16.6■□□□□ 0.25
SMARCD1-202ENST00000394963 EIF3BP55884 814 aaKnown RBP16.6■□□□□ 0.25
SMARCD1-202ENST00000394963 TFDP2Q14188 446 aa16.6■□□□□ 0.25
SMARCD1-202ENST00000394963 DCAF4L1Q3SXM0 396 aa16.6■□□□□ 0.25
SMARCD1-202ENST00000394963 PIGZQ86VD9 579 aa16.6■□□□□ 0.25
SMARCD1-202ENST00000394963 KCNK16Q96T55 309 aa16.6■□□□□ 0.25
SMARCD1-202ENST00000394963 C12orf65Q9H3J6 166 aaKnown RBP16.6■□□□□ 0.25
SMARCD1-202ENST00000394963 DDX56Q9NY93 547 aaKnown RBP16.6■□□□□ 0.25
SMARCD1-202ENST00000394963 KIAA1217Q5T5P2 1943 aa16.6■□□□□ 0.25
SMARCD1-202ENST00000394963 TNS1Q9HBL0 1735 aaKnown RBP16.6■□□□□ 0.25
SMARCD1-202ENST00000394963 MKI67P46013 3256 aaKnown RBP16.6■□□□□ 0.25
SMARCD1-202ENST00000394963 GMNCA6NCL1 334 aa16.6■□□□□ 0.25
SMARCD1-202ENST00000394963 TCP11X1B4DZS4 312 aa16.6■□□□□ 0.25
SMARCD1-202ENST00000394963 APOL1O14791 398 aa16.6■□□□□ 0.25
SMARCD1-202ENST00000394963 ASGR1P07306 291 aa16.6■□□□□ 0.25
SMARCD1-202ENST00000394963 TFE3P19532 575 aaPredicted RBP16.6■□□□□ 0.25
SMARCD1-202ENST00000394963 BDNFP23560 247 aa16.6■□□□□ 0.25
SMARCD1-202ENST00000394963 TKTL1P51854 596 aa16.6■□□□□ 0.25
SMARCD1-202ENST00000394963 GDF10P55107 478 aa16.6■□□□□ 0.25
SMARCD1-202ENST00000394963 HEATR6Q6AI08 1181 aaKnown RBP16.6■□□□□ 0.25
SMARCD1-202ENST00000394963 CES3Q6UWW8 571 aa16.6■□□□□ 0.25
SMARCD1-202ENST00000394963 CELF6Q96J87 481 aaKnown RBP16.6■□□□□ 0.25
SMARCD1-202ENST00000394963 KLHL8Q9P2G9 620 aaPredicted RBP16.6■□□□□ 0.25
SMARCD1-202ENST00000394963 MYO1CO00159 1063 aa16.59■□□□□ 0.25
SMARCD1-202ENST00000394963 FSCN2O14926 492 aa16.59■□□□□ 0.25
SMARCD1-202ENST00000394963 ATP9BO43861 1147 aa16.59■□□□□ 0.25
SMARCD1-202ENST00000394963 KDELR1P24390 212 aa16.59■□□□□ 0.25
SMARCD1-202ENST00000394963 PBX3P40426 434 aa16.59■□□□□ 0.25
SMARCD1-202ENST00000394963 DEUP1Q05D60 604 aa16.59■□□□□ 0.25
SMARCD1-202ENST00000394963 SPARCL1Q14515 664 aa16.59■□□□□ 0.25
SMARCD1-202ENST00000394963 CCNG2Q16589 344 aa16.59■□□□□ 0.25
SMARCD1-202ENST00000394963 SENP8Q96LD8 212 aa16.59■□□□□ 0.25
SMARCD1-202ENST00000394963 TSPYL2Q9H2G4 693 aaPredicted RBP16.59■□□□□ 0.25
SMARCD1-202ENST00000394963 WDR35Q9P2L0 1181 aa16.59■□□□□ 0.25
SMARCD1-202ENST00000394963 STYXL1Q9Y6J8 313 aa16.59■□□□□ 0.25
SMARCD1-202ENST00000394963 LAMA2P24043 3122 aaKnown RBP16.59■□□□□ 0.25
SMARCD1-202ENST00000394963 CCDC195A0A1B0GUA6 201 aa16.59■□□□□ 0.25
SMARCD1-202ENST00000394963 GOLGA8CPA6NN73 597 aa16.59■□□□□ 0.25
SMARCD1-202ENST00000394963 LSM8O95777 96 aaKnown RBP16.59■□□□□ 0.25
SMARCD1-202ENST00000394963 CD4P01730 458 aa16.59■□□□□ 0.25
SMARCD1-202ENST00000394963 AARSP49588 968 aaKnown RBP eCLIP16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms