RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 HRO43593 1189 aa9.42□□□□□ -0.9
ATG4A-205ENST00000394892 PHACTR2O75167 634 aa9.42□□□□□ -0.9
ATG4A-205ENST00000394892 OAS1P00973 400 aaKnown RBP9.42□□□□□ -0.9
ATG4A-205ENST00000394892 EGFP01133 1207 aa9.42□□□□□ -0.9
ATG4A-205ENST00000394892 CCDC130P13994 396 aa9.42□□□□□ -0.9
ATG4A-205ENST00000394892 TCF3P15923 654 aa9.42□□□□□ -0.9
ATG4A-205ENST00000394892 BMP6P22004 513 aa9.42□□□□□ -0.9
ATG4A-205ENST00000394892 NR2F2P24468 414 aa9.42□□□□□ -0.9
ATG4A-205ENST00000394892 GJA4P35212 333 aa9.42□□□□□ -0.9
ATG4A-205ENST00000394892 AVPR1AP37288 418 aa9.42□□□□□ -0.9
ATG4A-205ENST00000394892 PRCPP42785 496 aa9.42□□□□□ -0.9
ATG4A-205ENST00000394892 GALK1P51570 392 aa9.42□□□□□ -0.9
ATG4A-205ENST00000394892 CCR3P51677 355 aa9.42□□□□□ -0.9
ATG4A-205ENST00000394892 VAMP7P51809 220 aa9.42□□□□□ -0.9
ATG4A-205ENST00000394892 NDST1P52848 882 aa9.42□□□□□ -0.9
ATG4A-205ENST00000394892 AP3M2P53677 418 aa9.42□□□□□ -0.9
ATG4A-205ENST00000394892 PLCB2Q00722 1185 aa9.42□□□□□ -0.9
ATG4A-205ENST00000394892 FAM160A1Q05DH4 1040 aa9.42□□□□□ -0.9
ATG4A-205ENST00000394892 TAF10Q12962 218 aa9.42□□□□□ -0.9
ATG4A-205ENST00000394892 SRSF5Q13243 272 aaKnown RBP9.42□□□□□ -0.9
ATG4A-205ENST00000394892 MTF1Q14872 753 aa9.42□□□□□ -0.9
ATG4A-205ENST00000394892 ZNF667Q5HYK9 610 aa9.42□□□□□ -0.9
ATG4A-205ENST00000394892 LAIR1Q6GTX8 287 aa9.42□□□□□ -0.9
ATG4A-205ENST00000394892 GPRIN1Q7Z2K8 1008 aa9.42□□□□□ -0.9
ATG4A-205ENST00000394892 FAM35AQ86V20 835 aa9.42□□□□□ -0.9
ATG4A-205ENST00000394892 SFTPA1Q8IWL2 248 aa9.42□□□□□ -0.9
ATG4A-205ENST00000394892 ZC3H3Q8IXZ2 948 aaKnown RBP9.42□□□□□ -0.9
ATG4A-205ENST00000394892 CRYBG2Q8N1P7 616 aa9.42□□□□□ -0.9
ATG4A-205ENST00000394892 SPEM1Q8N4L4 309 aa9.42□□□□□ -0.9
ATG4A-205ENST00000394892 OSCP1Q8WVF1 389 aa9.42□□□□□ -0.9
ATG4A-205ENST00000394892 DDX1Q92499 740 aaKnown RBP9.42□□□□□ -0.9
ATG4A-205ENST00000394892 ECT2Q9H8V3 914 aa9.42□□□□□ -0.9
ATG4A-205ENST00000394892 UXTQ9UBK9 157 aaPredicted RBP9.42□□□□□ -0.9
ATG4A-205ENST00000394892 ARHGAP26Q9UNA1 814 aa9.42□□□□□ -0.9
ATG4A-205ENST00000394892 PCDHA5Q9Y5H7 936 aa9.42□□□□□ -0.9
ATG4A-205ENST00000394892 TRAV19A0A0A6YYK7 116 aa9.41□□□□□ -0.9
ATG4A-205ENST00000394892 FAM92AA1XBS5 289 aa9.41□□□□□ -0.9
ATG4A-205ENST00000394892 CHURC1-FNTBB4DL54 471 aa9.41□□□□□ -0.9
ATG4A-205ENST00000394892 LEFTY2O00292 366 aa9.41□□□□□ -0.9
ATG4A-205ENST00000394892 CALUO43852 315 aaPredicted RBP9.41□□□□□ -0.9
ATG4A-205ENST00000394892 GREM1O60565 184 aa9.41□□□□□ -0.9
ATG4A-205ENST00000394892 LRP3O75074 770 aa9.41□□□□□ -0.9
ATG4A-205ENST00000394892 GADD45BO75293 160 aaPredicted RBP9.41□□□□□ -0.9
ATG4A-205ENST00000394892 PAPSS2O95340 614 aaPredicted RBP9.41□□□□□ -0.9
ATG4A-205ENST00000394892 CKMP06732 381 aa9.41□□□□□ -0.9
ATG4A-205ENST00000394892 RETP07949 1114 aa9.41□□□□□ -0.9
ATG4A-205ENST00000394892 USP17L7P0C7H9 530 aa9.41□□□□□ -0.9
ATG4A-205ENST00000394892 ZDHHC11BP0C7U3 371 aa9.41□□□□□ -0.9
ATG4A-205ENST00000394892 CD44P16070 742 aaKnown RBP9.41□□□□□ -0.9
ATG4A-205ENST00000394892 HDCP19113 662 aa9.41□□□□□ -0.9
ATG4A-205ENST00000394892 OPRD1P41143 372 aa9.41□□□□□ -0.9
ATG4A-205ENST00000394892 FNTBP49356 437 aa9.41□□□□□ -0.9
ATG4A-205ENST00000394892 SLC7A9P82251 487 aa9.41□□□□□ -0.9
ATG4A-205ENST00000394892 ADAM9Q13443 819 aa9.41□□□□□ -0.9
ATG4A-205ENST00000394892 MAPRE1Q15691 268 aaKnown RBP9.41□□□□□ -0.9
ATG4A-205ENST00000394892 ST3GAL2Q16842 350 aa9.41□□□□□ -0.9
ATG4A-205ENST00000394892 SGSM1Q2NKQ1 1148 aa9.41□□□□□ -0.9
ATG4A-205ENST00000394892 C1orf228Q6PIY5 440 aa9.41□□□□□ -0.9
ATG4A-205ENST00000394892 PRR23BQ6ZRT6 265 aa9.41□□□□□ -0.9
ATG4A-205ENST00000394892 FAM186BQ8IYM0 893 aa9.41□□□□□ -0.9
ATG4A-205ENST00000394892 SLC2A14Q8TDB8 520 aa9.41□□□□□ -0.9
ATG4A-205ENST00000394892 NETO1Q8TDF5 533 aa9.41□□□□□ -0.9
ATG4A-205ENST00000394892 P2RY11Q96G91 374 aa9.41□□□□□ -0.9
ATG4A-205ENST00000394892 MSANTD3Q96H12 275 aa9.41□□□□□ -0.9
ATG4A-205ENST00000394892 CEP295NLQ96MC4 621 aa9.41□□□□□ -0.9
ATG4A-205ENST00000394892 ELOVL4Q9GZR5 314 aa9.41□□□□□ -0.9
ATG4A-205ENST00000394892 KIF9Q9HAQ2 790 aa9.41□□□□□ -0.9
ATG4A-205ENST00000394892 CSNK1G1Q9HCP0 422 aa9.41□□□□□ -0.9
ATG4A-205ENST00000394892 PARD6AQ9NPB6 346 aa9.41□□□□□ -0.9
ATG4A-205ENST00000394892 OSER1Q9NX31 292 aa9.41□□□□□ -0.9
ATG4A-205ENST00000394892 CHORDC1Q9UHD1 332 aaPredicted RBP9.41□□□□□ -0.9
ATG4A-205ENST00000394892 ZMYM5Q9UJ78 669 aa9.41□□□□□ -0.9
ATG4A-205ENST00000394892 R3HCC1Q9Y3T6 440 aaKnown RBP9.41□□□□□ -0.9
ATG4A-205ENST00000394892 DMXL1Q9Y485 3027 aa9.4□□□□□ -0.9
ATG4A-205ENST00000394892 TRIM49BA6NDI0 452 aa9.4□□□□□ -0.9
ATG4A-205ENST00000394892 TRIM66O15016 1216 aa9.4□□□□□ -0.9
ATG4A-205ENST00000394892 COCHO43405 550 aa9.4□□□□□ -0.9
ATG4A-205ENST00000394892 CILPO75339 1184 aa9.4□□□□□ -0.9
ATG4A-205ENST00000394892 KRT37O76014 449 aa9.4□□□□□ -0.9
ATG4A-205ENST00000394892 CNR2P34972 360 aa9.4□□□□□ -0.9
ATG4A-205ENST00000394892 PSMC2P35998 433 aaKnown RBP9.4□□□□□ -0.9
ATG4A-205ENST00000394892 CXCL12P48061 93 aa9.4□□□□□ -0.9
ATG4A-205ENST00000394892 PXNP49023 591 aaPredicted RBP9.4□□□□□ -0.9
ATG4A-205ENST00000394892 SLC5A3P53794 718 aa9.4□□□□□ -0.9
ATG4A-205ENST00000394892 SPEM2Q0P670 501 aa9.4□□□□□ -0.9
ATG4A-205ENST00000394892 INCA1Q0VD86 236 aa9.4□□□□□ -0.9
ATG4A-205ENST00000394892 IFRD2Q12894 506 aaPredicted RBP9.4□□□□□ -0.9
ATG4A-205ENST00000394892 SIM2Q14190 667 aaPredicted RBP9.4□□□□□ -0.9
ATG4A-205ENST00000394892 LRRC32Q14392 662 aa9.4□□□□□ -0.9
ATG4A-205ENST00000394892 PDGFRLQ15198 375 aa9.4□□□□□ -0.9
ATG4A-205ENST00000394892 CBWD6Q4V339 395 aa9.4□□□□□ -0.9
ATG4A-205ENST00000394892 COBLL1Q53SF7 1204 aa9.4□□□□□ -0.9
ATG4A-205ENST00000394892 CBWD3Q5JTY5 395 aa9.4□□□□□ -0.9
ATG4A-205ENST00000394892 DGKKQ5KSL6 1271 aa9.4□□□□□ -0.9
ATG4A-205ENST00000394892 CBWD5Q5RIA9 395 aa9.4□□□□□ -0.9
ATG4A-205ENST00000394892 ANKRD40Q6AI12 368 aa9.4□□□□□ -0.9
ATG4A-205ENST00000394892 NUP93Q8N1F7 819 aa9.4□□□□□ -0.9
ATG4A-205ENST00000394892 TTC16Q8NEE8 873 aa9.4□□□□□ -0.9
ATG4A-205ENST00000394892 TATDN2Q93075 761 aa9.4□□□□□ -0.9
ATG4A-205ENST00000394892 ARID3AQ99856 593 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms