RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 RBBP8Q99708 897 aa10.76□□□□□ -0.69
COL4A6-203ENST00000394872 MANSC1Q9H8J5 431 aa10.76□□□□□ -0.69
COL4A6-203ENST00000394872 SETD4Q9NVD3 440 aa10.76□□□□□ -0.69
COL4A6-203ENST00000394872 DPP7Q9UHL4 492 aa10.76□□□□□ -0.69
COL4A6-203ENST00000394872 WDR47O94967 919 aa10.76□□□□□ -0.69
COL4A6-203ENST00000394872 POMCP01189 267 aa10.76□□□□□ -0.69
COL4A6-203ENST00000394872 FDPSP14324 419 aaKnown RBP10.76□□□□□ -0.69
COL4A6-203ENST00000394872 CHI3L1P36222 383 aaPredicted RBP10.76□□□□□ -0.69
COL4A6-203ENST00000394872 SLC26A2P50443 739 aa10.76□□□□□ -0.69
COL4A6-203ENST00000394872 AASDHQ4L235 1098 aaPredicted RBP10.76□□□□□ -0.69
COL4A6-203ENST00000394872 TXNRD3Q86VQ6 643 aa10.76□□□□□ -0.69
COL4A6-203ENST00000394872 RIBC1Q8N443 379 aaPredicted RBP10.76□□□□□ -0.69
COL4A6-203ENST00000394872 DIS3LQ8TF46 1054 aaKnown RBP10.76□□□□□ -0.69
COL4A6-203ENST00000394872 E2F7Q96AV8 911 aa10.76□□□□□ -0.69
COL4A6-203ENST00000394872 THTPAQ9BU02 230 aa10.76□□□□□ -0.69
COL4A6-203ENST00000394872 SPATC1LQ9H0A9 340 aa10.76□□□□□ -0.69
COL4A6-203ENST00000394872 TMEM39AQ9NV64 488 aa10.76□□□□□ -0.69
COL4A6-203ENST00000394872 ZNF229Q9UJW7 825 aa10.76□□□□□ -0.69
COL4A6-203ENST00000394872 RUVBL2Q9Y230 463 aaKnown RBP10.76□□□□□ -0.69
COL4A6-203ENST00000394872 TMX2Q9Y320 296 aa10.76□□□□□ -0.69
COL4A6-203ENST00000394872 PPP1R37O75864 691 aa10.76□□□□□ -0.69
COL4A6-203ENST00000394872 FBXO21O94952 628 aa10.76□□□□□ -0.69
COL4A6-203ENST00000394872 GYPCP04921 128 aa10.76□□□□□ -0.69
COL4A6-203ENST00000394872 LAMTOR4Q0VGL1 99 aa10.76□□□□□ -0.69
COL4A6-203ENST00000394872 PDIA6Q15084 440 aa10.76□□□□□ -0.69
COL4A6-203ENST00000394872 ZNF438Q7Z4V0 828 aa10.76□□□□□ -0.69
COL4A6-203ENST00000394872 PRPF39Q86UA1 669 aaKnown RBP10.76□□□□□ -0.69
COL4A6-203ENST00000394872 KAT2BQ92831 832 aa10.76□□□□□ -0.69
COL4A6-203ENST00000394872 GMCL1Q96IK5 515 aa10.76□□□□□ -0.69
COL4A6-203ENST00000394872 ROPN1BQ9BZX4 212 aaPredicted RBP10.76□□□□□ -0.69
COL4A6-203ENST00000394872 ROPN1Q9HAT0 212 aaPredicted RBP10.76□□□□□ -0.69
COL4A6-203ENST00000394872 ZC4H2Q9NQZ6 224 aa10.76□□□□□ -0.69
COL4A6-203ENST00000394872 TRPC5OSA6NMA1 111 aa10.75□□□□□ -0.69
COL4A6-203ENST00000394872 NFIBO00712 420 aa10.75□□□□□ -0.69
COL4A6-203ENST00000394872 CTDNEP1O95476 244 aa10.75□□□□□ -0.69
COL4A6-203ENST00000394872 APOA4P06727 396 aa10.75□□□□□ -0.69
COL4A6-203ENST00000394872 ERVK-10P10266 1014 aa10.75□□□□□ -0.69
COL4A6-203ENST00000394872 VEGFAP15692 232 aaPredicted RBP10.75□□□□□ -0.69
COL4A6-203ENST00000394872 PRIM2P49643 509 aa10.75□□□□□ -0.69
COL4A6-203ENST00000394872 PDK2Q15119 407 aa10.75□□□□□ -0.69
COL4A6-203ENST00000394872 Q4G0T1 1027 aa10.75□□□□□ -0.69
COL4A6-203ENST00000394872 CACHD1Q5VU97 1274 aa10.75□□□□□ -0.69
COL4A6-203ENST00000394872 POP1Q99575 1024 aaKnown RBP10.75□□□□□ -0.69
COL4A6-203ENST00000394872 ERP44Q9BS26 406 aa10.75□□□□□ -0.69
COL4A6-203ENST00000394872 TLR8Q9NR97 1041 aaKnown RBP10.75□□□□□ -0.69
COL4A6-203ENST00000394872 GPATCH2LQ9NWQ4 482 aa10.75□□□□□ -0.69
COL4A6-203ENST00000394872 SNTG2Q9NY99 539 aa10.75□□□□□ -0.69
COL4A6-203ENST00000394872 PLA2G4CQ9UP65 541 aa10.75□□□□□ -0.69
COL4A6-203ENST00000394872 DYRK1BQ9Y463 629 aa10.75□□□□□ -0.69
COL4A6-203ENST00000394872 CNTNAP2Q9UHC6 1331 aa10.75□□□□□ -0.69
COL4A6-203ENST00000394872 GOLGA8TH3BQL2 631 aa10.75□□□□□ -0.69
COL4A6-203ENST00000394872 ZBTB39O15060 712 aa10.75□□□□□ -0.69
COL4A6-203ENST00000394872 ADCY3O60266 1144 aa10.75□□□□□ -0.69
COL4A6-203ENST00000394872 DDNO94850 711 aaPredicted RBP10.75□□□□□ -0.69
COL4A6-203ENST00000394872 KLRC2P26717 231 aa10.75□□□□□ -0.69
COL4A6-203ENST00000394872 GRIK4Q16099 956 aa10.75□□□□□ -0.69
COL4A6-203ENST00000394872 MYO1HQ8N1T3 1032 aa10.75□□□□□ -0.69
COL4A6-203ENST00000394872 USP38Q8NB14 1042 aa10.75□□□□□ -0.69
COL4A6-203ENST00000394872 ARMC2Q8NEN0 867 aa10.75□□□□□ -0.69
COL4A6-203ENST00000394872 TPCN2Q8NHX9 752 aa10.75□□□□□ -0.69
COL4A6-203ENST00000394872 MAGEB10Q96LZ2 347 aaPredicted RBP10.75□□□□□ -0.69
COL4A6-203ENST00000394872 RTFDC1Q9BY42 306 aaPredicted RBP10.75□□□□□ -0.69
COL4A6-203ENST00000394872 SHCBP1LQ9BZQ2 653 aa10.75□□□□□ -0.69
COL4A6-203ENST00000394872 HPS5Q9UPZ3 1129 aa10.75□□□□□ -0.69
COL4A6-203ENST00000394872 DYRK3O43781 588 aa10.75□□□□□ -0.69
COL4A6-203ENST00000394872 STIP1P31948 543 aaKnown RBP10.75□□□□□ -0.69
COL4A6-203ENST00000394872 CCZ1BP86790 482 aa10.75□□□□□ -0.69
COL4A6-203ENST00000394872 CCZ1P86791 482 aaPredicted RBP10.75□□□□□ -0.69
COL4A6-203ENST00000394872 ALDH6A1Q02252 535 aaKnown RBP10.75□□□□□ -0.69
COL4A6-203ENST00000394872 MRPL28Q13084 256 aaKnown RBP10.75□□□□□ -0.69
COL4A6-203ENST00000394872 KCNT1Q5JUK3 1230 aa10.75□□□□□ -0.69
COL4A6-203ENST00000394872 WDR49Q8IV35 697 aa10.75□□□□□ -0.69
COL4A6-203ENST00000394872 DNAJB3Q8WWF6 145 aa10.75□□□□□ -0.69
COL4A6-203ENST00000394872 RPS6KL1Q9Y6S9 549 aa10.75□□□□□ -0.69
COL4A6-203ENST00000394872 PHF20L1A8MW92 1017 aa10.75□□□□□ -0.69
COL4A6-203ENST00000394872 PCDH8O95206 1070 aa10.75□□□□□ -0.69
COL4A6-203ENST00000394872 RAG1P15918 1043 aa10.75□□□□□ -0.69
COL4A6-203ENST00000394872 MOXD1Q6UVY6 613 aa10.75□□□□□ -0.69
COL4A6-203ENST00000394872 RAD9BQ6WBX8 426 aa10.75□□□□□ -0.69
COL4A6-203ENST00000394872 DNERQ8NFT8 737 aa10.75□□□□□ -0.69
COL4A6-203ENST00000394872 ECSITQ9BQ95 431 aa10.75□□□□□ -0.69
COL4A6-203ENST00000394872 FRMD8Q9BZ67 464 aaPredicted RBP10.75□□□□□ -0.69
COL4A6-203ENST00000394872 FRMD8P1Q9BZ68 369 aaPredicted RBP10.75□□□□□ -0.69
COL4A6-203ENST00000394872 KLC4Q9NSK0 619 aa10.75□□□□□ -0.69
COL4A6-203ENST00000394872 KANSL3Q9P2N6 904 aa10.75□□□□□ -0.69
COL4A6-203ENST00000394872 TMEM120BA0PK00 339 aa10.75□□□□□ -0.69
COL4A6-203ENST00000394872 MANSC4A6NHS7 340 aaPredicted RBP10.75□□□□□ -0.69
COL4A6-203ENST00000394872 TRPC1P48995 793 aa10.75□□□□□ -0.69
COL4A6-203ENST00000394872 KPNA1P52294 538 aaPredicted RBP10.75□□□□□ -0.69
COL4A6-203ENST00000394872 SLC16A1P53985 500 aa10.75□□□□□ -0.69
COL4A6-203ENST00000394872 AMPD2Q01433 879 aa10.75□□□□□ -0.69
COL4A6-203ENST00000394872 PLD1Q13393 1074 aa10.75□□□□□ -0.69
COL4A6-203ENST00000394872 FUT11Q495W5 492 aa10.75□□□□□ -0.69
COL4A6-203ENST00000394872 C2CD6Q53TS8 623 aa10.75□□□□□ -0.69
COL4A6-203ENST00000394872 METTL7BQ6UX53 244 aa10.75□□□□□ -0.69
COL4A6-203ENST00000394872 CCNI2Q6ZMN8 369 aaPredicted RBP10.75□□□□□ -0.69
COL4A6-203ENST00000394872 AGGF1Q8N302 714 aaeCLIP10.75□□□□□ -0.69
COL4A6-203ENST00000394872 OSGEPL1Q9H4B0 414 aa10.75□□□□□ -0.69
COL4A6-203ENST00000394872 PDGFCQ9NRA1 345 aa10.75□□□□□ -0.69
COL4A6-203ENST00000394872 GTF3C4Q9UKN8 822 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms