RNA–Protein interactions for RNA: ENST00000394803.9

UBE2D3-208, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,227 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-208ENST00000394803 PDP2Q9P2J9 529 aa10.48□□□□□ -0.73
UBE2D3-208ENST00000394803 PARP14Q460N5 1801 aa10.48□□□□□ -0.73
UBE2D3-208ENST00000394803 MAGEA13PA6NCF6 341 aa10.48□□□□□ -0.73
UBE2D3-208ENST00000394803 BIRC5O15392 142 aa10.48□□□□□ -0.73
UBE2D3-208ENST00000394803 ECM2O94769 699 aaPredicted RBP10.48□□□□□ -0.73
UBE2D3-208ENST00000394803 DLDP09622 509 aaKnown RBP10.48□□□□□ -0.73
UBE2D3-208ENST00000394803 P4HA1P13674 534 aa10.48□□□□□ -0.73
UBE2D3-208ENST00000394803 GM2AP17900 193 aa10.48□□□□□ -0.73
UBE2D3-208ENST00000394803 CHRNA5P30532 468 aa10.48□□□□□ -0.73
UBE2D3-208ENST00000394803 RFC1P35251 1148 aaPredicted RBP10.48□□□□□ -0.73
UBE2D3-208ENST00000394803 PGM1P36871 562 aa10.48□□□□□ -0.73
UBE2D3-208ENST00000394803 WNT7BP56706 349 aa10.48□□□□□ -0.73
UBE2D3-208ENST00000394803 MTMR2Q13614 643 aa10.48□□□□□ -0.73
UBE2D3-208ENST00000394803 MXD4Q14582 209 aaPredicted RBP10.48□□□□□ -0.73
UBE2D3-208ENST00000394803 NOMO1Q15155 1222 aa10.48□□□□□ -0.73
UBE2D3-208ENST00000394803 ANGEL2Q5VTE6 544 aaKnown RBP10.48□□□□□ -0.73
UBE2D3-208ENST00000394803 IER5Q5VY09 327 aa10.48□□□□□ -0.73
UBE2D3-208ENST00000394803 ANKRD22Q5VYY1 191 aa10.48□□□□□ -0.73
UBE2D3-208ENST00000394803 DARS2Q6PI48 645 aaKnown RBP10.48□□□□□ -0.73
UBE2D3-208ENST00000394803 LRRC6Q86X45 466 aa10.48□□□□□ -0.73
UBE2D3-208ENST00000394803 SLC4A11Q8NBS3 891 aa10.48□□□□□ -0.73
UBE2D3-208ENST00000394803 TTC8Q8TAM2 541 aa10.48□□□□□ -0.73
UBE2D3-208ENST00000394803 SPATA18Q8TC71 538 aa10.48□□□□□ -0.73
UBE2D3-208ENST00000394803 FAM111AQ96PZ2 611 aa10.48□□□□□ -0.73
UBE2D3-208ENST00000394803 TEX13BQ9BXU2 312 aa10.48□□□□□ -0.73
UBE2D3-208ENST00000394803 GCOM2Q9BZD3 368 aaPredicted RBP10.48□□□□□ -0.73
UBE2D3-208ENST00000394803 HAPLN2Q9GZV7 340 aa10.48□□□□□ -0.73
UBE2D3-208ENST00000394803 KLC2Q9H0B6 622 aa10.48□□□□□ -0.73
UBE2D3-208ENST00000394803 VCX3BQ9H321 246 aa10.48□□□□□ -0.73
UBE2D3-208ENST00000394803 SLC24A3Q9HC58 644 aa10.48□□□□□ -0.73
UBE2D3-208ENST00000394803 ARL8BQ9NVJ2 186 aa10.48□□□□□ -0.73
UBE2D3-208ENST00000394803 SLC17A7Q9P2U7 560 aa10.48□□□□□ -0.73
UBE2D3-208ENST00000394803 CHMP2BQ9UQN3 213 aa10.48□□□□□ -0.73
UBE2D3-208ENST00000394803 TEX264Q9Y6I9 313 aa10.48□□□□□ -0.73
UBE2D3-208ENST00000394803 PHIPQ8WWQ0 1821 aa10.47□□□□□ -0.73
UBE2D3-208ENST00000394803 TCRBV9S1A1TA0A576 114 aa10.47□□□□□ -0.73
UBE2D3-208ENST00000394803 SPECC1L-ADORA2AF8WAN1 911 aa10.47□□□□□ -0.73
UBE2D3-208ENST00000394803 FCHO1O14526 889 aa10.47□□□□□ -0.73
UBE2D3-208ENST00000394803 SMIM24O75264 130 aa10.47□□□□□ -0.73
UBE2D3-208ENST00000394803 RARBP10826 455 aa10.47□□□□□ -0.73
UBE2D3-208ENST00000394803 MYL2P10916 166 aa10.47□□□□□ -0.73
UBE2D3-208ENST00000394803 CD19P15391 556 aa10.47□□□□□ -0.73
UBE2D3-208ENST00000394803 TGM2P21980 687 aa10.47□□□□□ -0.73
UBE2D3-208ENST00000394803 SSTR3P32745 418 aaPredicted RBP10.47□□□□□ -0.73
UBE2D3-208ENST00000394803 ELK3P41970 407 aa10.47□□□□□ -0.73
UBE2D3-208ENST00000394803 MYL6P60660 151 aa10.47□□□□□ -0.73
UBE2D3-208ENST00000394803 AP2B1P63010 937 aa10.47□□□□□ -0.73
UBE2D3-208ENST00000394803 SP4Q02446 784 aa10.47□□□□□ -0.73
UBE2D3-208ENST00000394803 EFTUD2Q15029 972 aaKnown RBP eCLIP10.47□□□□□ -0.734e-8■■■■■ 30.7
UBE2D3-208ENST00000394803 PDK2Q15119 407 aa10.47□□□□□ -0.73
UBE2D3-208ENST00000394803 MSS51Q4VC12 460 aa10.47□□□□□ -0.73
UBE2D3-208ENST00000394803 KHDC1Q4VXA5 237 aaKnown RBP10.47□□□□□ -0.73
UBE2D3-208ENST00000394803 TMEM154Q6P9G4 183 aa10.47□□□□□ -0.73
UBE2D3-208ENST00000394803 SLC30A9Q6PML9 568 aa10.47□□□□□ -0.73
UBE2D3-208ENST00000394803 ILDR2Q71H61 639 aa10.47□□□□□ -0.73
UBE2D3-208ENST00000394803 CRLF3Q8IUI8 442 aa10.47□□□□□ -0.73
UBE2D3-208ENST00000394803 ARHGAP18Q8N392 663 aa10.47□□□□□ -0.73
UBE2D3-208ENST00000394803 CEP120Q8N960 986 aa10.47□□□□□ -0.73
UBE2D3-208ENST00000394803 FAM71DQ8N9W8 422 aa10.47□□□□□ -0.73
UBE2D3-208ENST00000394803 FAF2Q96CS3 445 aa10.47□□□□□ -0.73
UBE2D3-208ENST00000394803 ATG4CQ96DT6 458 aa10.47□□□□□ -0.73
UBE2D3-208ENST00000394803 ZBTB45Q96K62 511 aaPredicted RBP10.47□□□□□ -0.73
UBE2D3-208ENST00000394803 NR1H4Q96RI1 486 aaPredicted RBP10.47□□□□□ -0.73
UBE2D3-208ENST00000394803 MIPEPQ99797 713 aa10.47□□□□□ -0.73
UBE2D3-208ENST00000394803 FAM192AQ9GZU8 254 aa10.47□□□□□ -0.73
UBE2D3-208ENST00000394803 GPAMQ9HCL2 828 aa10.47□□□□□ -0.73
UBE2D3-208ENST00000394803 CNTN3Q9P232 1028 aa10.47□□□□□ -0.73
UBE2D3-208ENST00000394803 GOLGB1Q14789 3259 aaKnown RBP10.47□□□□□ -0.73
UBE2D3-208ENST00000394803 DOCK1Q14185 1865 aa10.47□□□□□ -0.73
UBE2D3-208ENST00000394803 C19orf81C9J6K1 198 aa10.46□□□□□ -0.73
UBE2D3-208ENST00000394803 KBTBD13C9JR72 458 aa10.46□□□□□ -0.73
UBE2D3-208ENST00000394803 CAPN9O14815 690 aa10.46□□□□□ -0.73
UBE2D3-208ENST00000394803 B4GALT4O60513 344 aa10.46□□□□□ -0.73
UBE2D3-208ENST00000394803 TMEM63AO94886 807 aa10.46□□□□□ -0.73
UBE2D3-208ENST00000394803 LINGO3P0C6S8 592 aa10.46□□□□□ -0.73
UBE2D3-208ENST00000394803 OSBPP22059 807 aa10.46□□□□□ -0.73
UBE2D3-208ENST00000394803 CCNHP51946 323 aaPredicted RBP10.46□□□□□ -0.73
UBE2D3-208ENST00000394803 GDF10P55107 478 aa10.46□□□□□ -0.73
UBE2D3-208ENST00000394803 BACE1P56817 501 aa10.46□□□□□ -0.73
UBE2D3-208ENST00000394803 SNX16P57768 344 aa10.46□□□□□ -0.73
UBE2D3-208ENST00000394803 OVGP1Q12889 678 aa10.46□□□□□ -0.73
UBE2D3-208ENST00000394803 KCNJ11Q14654 390 aa10.46□□□□□ -0.73
UBE2D3-208ENST00000394803 RBBP5Q15291 538 aaKnown RBP10.46□□□□□ -0.73
UBE2D3-208ENST00000394803 KBTBD12Q3ZCT8 623 aa10.46□□□□□ -0.73
UBE2D3-208ENST00000394803 PLEKHG4Q58EX7 1191 aa10.46□□□□□ -0.73
UBE2D3-208ENST00000394803 ZNF667Q5HYK9 610 aa10.46□□□□□ -0.73
UBE2D3-208ENST00000394803 CYP4A22Q5TCH4 519 aa10.46□□□□□ -0.73
UBE2D3-208ENST00000394803 TXNRD3NBQ6F5E7 133 aa10.46□□□□□ -0.73
UBE2D3-208ENST00000394803 ARCQ7LC44 396 aa10.46□□□□□ -0.73
UBE2D3-208ENST00000394803 MFN1Q8IWA4 741 aa10.46□□□□□ -0.73
UBE2D3-208ENST00000394803 WDTC1Q8N5D0 677 aa10.46□□□□□ -0.73
UBE2D3-208ENST00000394803 TTLL6Q8N841 843 aa10.46□□□□□ -0.73
UBE2D3-208ENST00000394803 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.46□□□□□ -0.735e-17■□□□□ 9.4
UBE2D3-208ENST00000394803 ZNF483Q8TF39 744 aaPredicted RBP10.46□□□□□ -0.73
UBE2D3-208ENST00000394803 SCG3Q8WXD2 468 aaKnown RBP10.46□□□□□ -0.73
UBE2D3-208ENST00000394803 E2F7Q96AV8 911 aa10.46□□□□□ -0.73
UBE2D3-208ENST00000394803 C12orf42Q96LP6 360 aa10.46□□□□□ -0.73
UBE2D3-208ENST00000394803 MTMR12Q9C0I1 747 aa10.46□□□□□ -0.73
UBE2D3-208ENST00000394803 YIPF3Q9GZM5 350 aa10.46□□□□□ -0.73
UBE2D3-208ENST00000394803 C1orf21Q9H246 121 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms