RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 CDT1Q9H211 546 aa14.12□□□□□ -0.15
GTF2F1-201ENST00000394456 SYNCQ9H7C4 482 aa14.12□□□□□ -0.15
GTF2F1-201ENST00000394456 ACTL7BQ9Y614 415 aa14.12□□□□□ -0.15
GTF2F1-201ENST00000394456 EDF1O60869 148 aaKnown RBP14.11□□□□□ -0.15
GTF2F1-201ENST00000394456 GM2AP17900 193 aa14.11□□□□□ -0.15
GTF2F1-201ENST00000394456 EIF4BP23588 611 aaKnown RBP14.11□□□□□ -0.15
GTF2F1-201ENST00000394456 HHATQ5VTY9 493 aa14.11□□□□□ -0.15
GTF2F1-201ENST00000394456 MZB1Q8WU39 189 aa14.11□□□□□ -0.15
GTF2F1-201ENST00000394456 MYCBPQ99417 103 aaPredicted RBP14.11□□□□□ -0.15
GTF2F1-201ENST00000394456 LPIN3Q9BQK8 851 aa14.11□□□□□ -0.15
GTF2F1-201ENST00000394456 C2orf40Q9H1Z8 148 aa14.11□□□□□ -0.15
GTF2F1-201ENST00000394456 PSMC3IPQ9P2W1 217 aaPredicted RBP14.11□□□□□ -0.15
GTF2F1-201ENST00000394456 XPO7Q9UIA9 1087 aaKnown RBP14.11□□□□□ -0.15
GTF2F1-201ENST00000394456 PPME1Q9Y570 386 aa14.11□□□□□ -0.15
GTF2F1-201ENST00000394456 SIGLEC16A6NMB1 481 aa14.11□□□□□ -0.15
GTF2F1-201ENST00000394456 ACKR2O00590 384 aa14.11□□□□□ -0.15
GTF2F1-201ENST00000394456 PRPF4O43172 522 aaKnown RBP eCLIP14.11□□□□□ -0.15
GTF2F1-201ENST00000394456 DIAPH2O60879 1101 aa14.11□□□□□ -0.15
GTF2F1-201ENST00000394456 MICAL2O94851 1124 aa14.11□□□□□ -0.15
GTF2F1-201ENST00000394456 UNC5CO95185 931 aa14.11□□□□□ -0.15
GTF2F1-201ENST00000394456 VTNP04004 478 aa14.11□□□□□ -0.15
GTF2F1-201ENST00000394456 EZRP15311 586 aaKnown RBP14.11□□□□□ -0.15
GTF2F1-201ENST00000394456 ELF1P32519 619 aa14.11□□□□□ -0.15
GTF2F1-201ENST00000394456 CDH5P33151 784 aaPredicted RBP14.11□□□□□ -0.15
GTF2F1-201ENST00000394456 SLC26A2P50443 739 aa14.11□□□□□ -0.15
GTF2F1-201ENST00000394456 EIF3EP60228 445 aaKnown RBP14.11□□□□□ -0.15
GTF2F1-201ENST00000394456 MBTD1Q05BQ5 628 aa14.11□□□□□ -0.15
GTF2F1-201ENST00000394456 PDK4Q16654 411 aa14.11□□□□□ -0.15
GTF2F1-201ENST00000394456 EFHC2Q5JST6 749 aa14.11□□□□□ -0.15
GTF2F1-201ENST00000394456 JADE1Q6IE81 842 aa14.11□□□□□ -0.15
GTF2F1-201ENST00000394456 C1orf228Q6PIY5 440 aa14.11□□□□□ -0.15
GTF2F1-201ENST00000394456 MPZL3Q6UWV2 235 aa14.11□□□□□ -0.15
GTF2F1-201ENST00000394456 PRPF39Q86UA1 669 aaKnown RBP14.11□□□□□ -0.15
GTF2F1-201ENST00000394456 VSIG1Q86XK7 387 aa14.11□□□□□ -0.15
GTF2F1-201ENST00000394456 ZNF276Q8N554 614 aa14.11□□□□□ -0.15
GTF2F1-201ENST00000394456 KCTD6Q8NC69 237 aa14.11□□□□□ -0.15
GTF2F1-201ENST00000394456 TCP10LQ8TDR4 215 aa14.11□□□□□ -0.15
GTF2F1-201ENST00000394456 LRRC8CQ8TDW0 803 aa14.11□□□□□ -0.15
GTF2F1-201ENST00000394456 C10orf82Q8WW14 230 aa14.11□□□□□ -0.15
GTF2F1-201ENST00000394456 RSAD2Q8WXG1 361 aa14.11□□□□□ -0.15
GTF2F1-201ENST00000394456 PTPRHQ9HD43 1115 aa14.11□□□□□ -0.15
GTF2F1-201ENST00000394456 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.11□□□□□ -0.15
GTF2F1-201ENST00000394456 PCDHGC3Q9UN70 934 aa14.11□□□□□ -0.15
GTF2F1-201ENST00000394456 SHOC2Q9UQ13 582 aa14.11□□□□□ -0.15
GTF2F1-201ENST00000394456 CEP83Q9Y592 693 aa14.11□□□□□ -0.15
GTF2F1-201ENST00000394456 NR2E3Q9Y5X4 410 aa14.11□□□□□ -0.15
GTF2F1-201ENST00000394456 LACTBL1A8MY62 500 aa14.1□□□□□ -0.15
GTF2F1-201ENST00000394456 GEMIN4P57678 1058 aaKnown RBP14.1□□□□□ -0.15
GTF2F1-201ENST00000394456 TDRPQ86YL5 185 aa14.1□□□□□ -0.15
GTF2F1-201ENST00000394456 NIPA2Q8N8Q9 360 aa14.1□□□□□ -0.15
GTF2F1-201ENST00000394456 C12orf29Q8N999 325 aa14.1□□□□□ -0.15
GTF2F1-201ENST00000394456 GIMAP7Q8NHV1 300 aa14.1□□□□□ -0.15
GTF2F1-201ENST00000394456 MAGEC3Q8TD91 643 aa14.1□□□□□ -0.15
GTF2F1-201ENST00000394456 DCAKDQ8WVC6 231 aa14.1□□□□□ -0.15
GTF2F1-201ENST00000394456 SERAC1Q96JX3 654 aa14.1□□□□□ -0.15
GTF2F1-201ENST00000394456 FZD8Q9H461 694 aa14.1□□□□□ -0.15
GTF2F1-201ENST00000394456 YY1AP1Q9H869 796 aa14.1□□□□□ -0.15
GTF2F1-201ENST00000394456 AKT3Q9Y243 479 aa14.1□□□□□ -0.15
GTF2F1-201ENST00000394456 A0A087WZ62 844 aa14.1□□□□□ -0.15
GTF2F1-201ENST00000394456 M0QYV0 167 aa14.1□□□□□ -0.15
GTF2F1-201ENST00000394456 RBP3P10745 1247 aa14.1□□□□□ -0.15
GTF2F1-201ENST00000394456 ALADP13716 330 aa14.1□□□□□ -0.15
GTF2F1-201ENST00000394456 CCNB1P14635 433 aa14.1□□□□□ -0.15
GTF2F1-201ENST00000394456 ELK3P41970 407 aa14.1□□□□□ -0.15
GTF2F1-201ENST00000394456 RGS7P49802 495 aa14.1□□□□□ -0.15
GTF2F1-201ENST00000394456 GTF2A2P52657 109 aa14.1□□□□□ -0.15
GTF2F1-201ENST00000394456 LAMC2Q13753 1193 aa14.1□□□□□ -0.15
GTF2F1-201ENST00000394456 TSHZ1Q6ZSZ6 1077 aa14.1□□□□□ -0.15
GTF2F1-201ENST00000394456 BBS12Q6ZW61 710 aa14.1□□□□□ -0.15
GTF2F1-201ENST00000394456 CYP4V2Q6ZWL3 525 aaPredicted RBP14.1□□□□□ -0.15
GTF2F1-201ENST00000394456 DPP9Q86TI2 863 aa14.1□□□□□ -0.15
GTF2F1-201ENST00000394456 LRRC6Q86X45 466 aa14.1□□□□□ -0.15
GTF2F1-201ENST00000394456 PPIL6Q8IXY8 311 aa14.1□□□□□ -0.15
GTF2F1-201ENST00000394456 EXOC8Q8IYI6 725 aa14.1□□□□□ -0.15
GTF2F1-201ENST00000394456 TTC25Q96NG3 672 aa14.1□□□□□ -0.15
GTF2F1-201ENST00000394456 FDXACB1Q9BRP7 624 aaPredicted RBP14.1□□□□□ -0.15
GTF2F1-201ENST00000394456 IFT122Q9HBG6 1241 aa14.1□□□□□ -0.15
GTF2F1-201ENST00000394456 F5H423 210 aaPredicted RBP14.09□□□□□ -0.15
GTF2F1-201ENST00000394456 MAGEB2O15479 319 aa14.09□□□□□ -0.15
GTF2F1-201ENST00000394456 SNAI1O95863 264 aaPredicted RBP14.09□□□□□ -0.15
GTF2F1-201ENST00000394456 PROZP22891 400 aa14.09□□□□□ -0.15
GTF2F1-201ENST00000394456 EPHB2P29323 1055 aa14.09□□□□□ -0.15
GTF2F1-201ENST00000394456 SLC8A1P32418 973 aa14.09□□□□□ -0.15
GTF2F1-201ENST00000394456 RIPK1Q13546 671 aa14.09□□□□□ -0.15
GTF2F1-201ENST00000394456 RIBC1Q8N443 379 aaPredicted RBP14.09□□□□□ -0.15
GTF2F1-201ENST00000394456 NETO2Q8NC67 525 aa14.09□□□□□ -0.15
GTF2F1-201ENST00000394456 SPATA18Q8TC71 538 aa14.09□□□□□ -0.15
GTF2F1-201ENST00000394456 SLC7A6OSQ96CW6 309 aaPredicted RBP14.09□□□□□ -0.15
GTF2F1-201ENST00000394456 ZNF570Q96NI8 536 aa14.09□□□□□ -0.15
GTF2F1-201ENST00000394456 DDX56Q9NY93 547 aaKnown RBP14.09□□□□□ -0.15
GTF2F1-201ENST00000394456 ZMYND8Q9ULU4 1186 aaPredicted RBP14.09□□□□□ -0.15
GTF2F1-201ENST00000394456 STARD13Q9Y3M8 1113 aa14.09□□□□□ -0.15
GTF2F1-201ENST00000394456 HCRTO43612 131 aa14.09□□□□□ -0.15
GTF2F1-201ENST00000394456 TNNC2P02585 160 aa14.09□□□□□ -0.15
GTF2F1-201ENST00000394456 PTPN7P35236 360 aa14.09□□□□□ -0.15
GTF2F1-201ENST00000394456 YWHAEP62258 255 aaKnown RBP14.09□□□□□ -0.15
GTF2F1-201ENST00000394456 ATP11AP98196 1134 aa14.09□□□□□ -0.15
GTF2F1-201ENST00000394456 SMAD1Q15797 465 aaKnown RBP14.09□□□□□ -0.15
GTF2F1-201ENST00000394456 TAF1BQ53T94 588 aaPredicted RBP14.09□□□□□ -0.15
GTF2F1-201ENST00000394456 ZC3H12AQ5D1E8 599 aaKnown RBP14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms