RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 LILRA4P59901 499 aa15.79■□□□□ 0.12
GPC3-202ENST00000394299 FASTKD3Q14CZ7 662 aaKnown RBP15.79■□□□□ 0.12
GPC3-202ENST00000394299 CA9Q16790 459 aa15.79■□□□□ 0.12
GPC3-202ENST00000394299 XKR4Q5GH76 650 aa15.79■□□□□ 0.12
GPC3-202ENST00000394299 DRICH1Q6PGQ1 229 aaPredicted RBP15.79■□□□□ 0.12
GPC3-202ENST00000394299 TMEM110Q86TL2 294 aa15.79■□□□□ 0.12
GPC3-202ENST00000394299 UNC45BQ8IWX7 931 aa15.79■□□□□ 0.12
GPC3-202ENST00000394299 SLC2A14Q8TDB8 520 aa15.79■□□□□ 0.12
GPC3-202ENST00000394299 CNPY3Q9BT09 278 aa15.79■□□□□ 0.12
GPC3-202ENST00000394299 KATNAL1Q9BW62 490 aa15.79■□□□□ 0.12
GPC3-202ENST00000394299 MIOSQ9NXC5 875 aa15.79■□□□□ 0.12
GPC3-202ENST00000394299 HESX1Q9UBX0 185 aa15.79■□□□□ 0.12
GPC3-202ENST00000394299 LCMT1Q9UIC8 334 aa15.79■□□□□ 0.12
GPC3-202ENST00000394299 ABT1Q9ULW3 272 aaKnown RBP15.79■□□□□ 0.12
GPC3-202ENST00000394299 ST3GAL5Q9UNP4 418 aa15.79■□□□□ 0.12
GPC3-202ENST00000394299 DRG1Q9Y295 367 aaKnown RBP15.79■□□□□ 0.12
GPC3-202ENST00000394299 CLDN5O00501 218 aa15.79■□□□□ 0.12
GPC3-202ENST00000394299 KCNE1P15382 129 aa15.79■□□□□ 0.12
GPC3-202ENST00000394299 CREB1P16220 341 aa15.79■□□□□ 0.12
GPC3-202ENST00000394299 TKTP29401 623 aaKnown RBP15.79■□□□□ 0.12
GPC3-202ENST00000394299 SLC6A3Q01959 620 aa15.79■□□□□ 0.12
GPC3-202ENST00000394299 IRF5Q13568 498 aa15.79■□□□□ 0.12
GPC3-202ENST00000394299 CYP4F22Q6NT55 531 aa15.79■□□□□ 0.12
GPC3-202ENST00000394299 PAXIP1Q6ZW49 1069 aaPredicted RBP15.79■□□□□ 0.12
GPC3-202ENST00000394299 BBS12Q6ZW61 710 aa15.79■□□□□ 0.12
GPC3-202ENST00000394299 TRMT10CQ7L0Y3 403 aaKnown RBP15.79■□□□□ 0.12
GPC3-202ENST00000394299 HOOK3Q86VS8 718 aa15.79■□□□□ 0.12
GPC3-202ENST00000394299 DNALI1O14645 258 aaPredicted RBP15.78■□□□□ 0.12
GPC3-202ENST00000394299 CD4P01730 458 aa15.78■□□□□ 0.12
GPC3-202ENST00000394299 CHRNA1P02708 482 aa15.78■□□□□ 0.12
GPC3-202ENST00000394299 CYBAP13498 195 aa15.78■□□□□ 0.12
GPC3-202ENST00000394299 PCBP1Q15365 356 aaKnown RBP eCLIP15.78■□□□□ 0.123e-38■□□□□ 10.2
GPC3-202ENST00000394299 TAZQ16635 292 aa15.78■□□□□ 0.12
GPC3-202ENST00000394299 PTGISQ16647 500 aa15.78■□□□□ 0.12
GPC3-202ENST00000394299 SYCP2LQ5T4T6 812 aa15.78■□□□□ 0.12
GPC3-202ENST00000394299 CAPN12Q6ZSI9 719 aa15.78■□□□□ 0.12
GPC3-202ENST00000394299 ZC3H18Q86VM9 953 aaKnown RBP15.78■□□□□ 0.12
GPC3-202ENST00000394299 TTC39CQ8N584 583 aa15.78■□□□□ 0.12
GPC3-202ENST00000394299 APPL2Q8NEU8 664 aa15.78■□□□□ 0.12
GPC3-202ENST00000394299 FAM172AQ8WUF8 416 aa15.78■□□□□ 0.12
GPC3-202ENST00000394299 NKD2Q969F2 451 aaPredicted RBP15.78■□□□□ 0.12
GPC3-202ENST00000394299 RBM15Q96T37 977 aaKnown RBP eCLIP15.78■□□□□ 0.121e-15■■□□□ 12.7
GPC3-202ENST00000394299 SNX25Q9H3E2 840 aa15.78■□□□□ 0.12
GPC3-202ENST00000394299 CALCOCO1Q9P1Z2 691 aa15.78■□□□□ 0.12
GPC3-202ENST00000394299 TIMM13Q9Y5L4 95 aaPredicted RBP15.78■□□□□ 0.12
GPC3-202ENST00000394299 GNAT1P11488 350 aa15.78■□□□□ 0.12
GPC3-202ENST00000394299 TAF6P49848 677 aa15.78■□□□□ 0.12
GPC3-202ENST00000394299 LMNB2Q03252 620 aa15.78■□□□□ 0.12
GPC3-202ENST00000394299 C1orf228Q6PIY5 440 aa15.78■□□□□ 0.12
GPC3-202ENST00000394299 UNC93AQ86WB7 457 aa15.78■□□□□ 0.12
GPC3-202ENST00000394299 NME8Q8N427 588 aa15.78■□□□□ 0.12
GPC3-202ENST00000394299 GSTCDQ8NEC7 633 aa15.78■□□□□ 0.12
GPC3-202ENST00000394299 PGM2Q96G03 612 aa15.78■□□□□ 0.12
GPC3-202ENST00000394299 GAD1Q99259 594 aa15.78■□□□□ 0.12
GPC3-202ENST00000394299 SELENOSQ9BQE4 189 aa15.78■□□□□ 0.12
GPC3-202ENST00000394299 GTF2IRD1Q9UHL9 959 aa15.78■□□□□ 0.12
GPC3-202ENST00000394299 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.78■□□□□ 0.12
GPC3-202ENST00000394299 PRPSAP2O60256 369 aa15.77■□□□□ 0.12
GPC3-202ENST00000394299 BEST1O76090 585 aa15.77■□□□□ 0.12
GPC3-202ENST00000394299 ITGAVP06756 1048 aa15.77■□□□□ 0.12
GPC3-202ENST00000394299 IL4RP24394 825 aa15.77■□□□□ 0.12
GPC3-202ENST00000394299 PCK1P35558 622 aa15.77■□□□□ 0.12
GPC3-202ENST00000394299 MLH1P40692 756 aa15.77■□□□□ 0.12
GPC3-202ENST00000394299 INHBEP58166 350 aa15.77■□□□□ 0.12
GPC3-202ENST00000394299 MRPS6P82932 125 aaKnown RBP15.77■□□□□ 0.12
GPC3-202ENST00000394299 PRKCZQ05513 592 aa15.77■□□□□ 0.12
GPC3-202ENST00000394299 C6orf118Q5T5N4 469 aa15.77■□□□□ 0.12
GPC3-202ENST00000394299 ANKRD22Q5VYY1 191 aa15.77■□□□□ 0.12
GPC3-202ENST00000394299 WSCD1Q658N2 575 aa15.77■□□□□ 0.12
GPC3-202ENST00000394299 CYP4X1Q8N118 509 aa15.77■□□□□ 0.12
GPC3-202ENST00000394299 FAM71DQ8N9W8 422 aa15.77■□□□□ 0.12
GPC3-202ENST00000394299 MTG1Q9BT17 334 aaPredicted RBP15.77■□□□□ 0.12
GPC3-202ENST00000394299 AGO3Q9H9G7 860 aaKnown RBP15.77■□□□□ 0.12
GPC3-202ENST00000394299 SAYSD1Q9NPB0 183 aa15.77■□□□□ 0.12
GPC3-202ENST00000394299 TBK1Q9UHD2 729 aa15.77■□□□□ 0.12
GPC3-202ENST00000394299 TPX2Q9ULW0 747 aaKnown RBP15.77■□□□□ 0.12
GPC3-202ENST00000394299 TCRBV7S3A2A0A539 114 aa15.77■□□□□ 0.11
GPC3-202ENST00000394299 E7EVH7 732 aa15.77■□□□□ 0.11
GPC3-202ENST00000394299 IVLP07476 585 aa15.77■□□□□ 0.11
GPC3-202ENST00000394299 MAGEA4P43358 317 aa15.77■□□□□ 0.11
GPC3-202ENST00000394299 GJA9P57773 515 aa15.77■□□□□ 0.11
GPC3-202ENST00000394299 CAV1Q03135 178 aa15.77■□□□□ 0.11
GPC3-202ENST00000394299 DPYSL3Q14195 570 aa15.77■□□□□ 0.11
GPC3-202ENST00000394299 STILQ15468 1287 aa15.77■□□□□ 0.11
GPC3-202ENST00000394299 KIAA0319Q5VV43 1072 aa15.77■□□□□ 0.11
GPC3-202ENST00000394299 ADGRF2Q8IZF7 708 aa15.77■□□□□ 0.11
GPC3-202ENST00000394299 CRYBG2Q8N1P7 616 aa15.77■□□□□ 0.11
GPC3-202ENST00000394299 CCDC33Q8N5R6 958 aa15.77■□□□□ 0.11
GPC3-202ENST00000394299 ARFGAP2Q8N6H7 521 aa15.77■□□□□ 0.11
GPC3-202ENST00000394299 ANKRD52Q8NB46 1076 aa15.77■□□□□ 0.11
GPC3-202ENST00000394299 PAAF1Q9BRP4 392 aa15.77■□□□□ 0.11
GPC3-202ENST00000394299 FAM129AQ9BZQ8 928 aa15.77■□□□□ 0.11
GPC3-202ENST00000394299 EPN3Q9H201 632 aa15.77■□□□□ 0.11
GPC3-202ENST00000394299 GDAP2Q9NXN4 497 aa15.77■□□□□ 0.11
GPC3-202ENST00000394299 TRPM7Q96QT4 1865 aa15.76■□□□□ 0.11
GPC3-202ENST00000394299 NDUFAB1O14561 156 aa15.76■□□□□ 0.11
GPC3-202ENST00000394299 CA12O43570 354 aa15.76■□□□□ 0.11
GPC3-202ENST00000394299 HUS1O60921 280 aa15.76■□□□□ 0.11
GPC3-202ENST00000394299 CCND3P30281 292 aaPredicted RBP15.76■□□□□ 0.11
GPC3-202ENST00000394299 SDC4P31431 198 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms