RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 WWOXQ9NZC7 414 aa13.85□□□□□ -0.19
USP49-203ENST00000394253 PLOD3O60568 738 aa13.85□□□□□ -0.19
USP49-203ENST00000394253 SOX11P35716 441 aa13.85□□□□□ -0.19
USP49-203ENST00000394253 SKA1Q96BD8 255 aa13.85□□□□□ -0.19
USP49-203ENST00000394253 KLHL11Q9NVR0 708 aa13.85□□□□□ -0.19
USP49-203ENST00000394253 RCOR1Q9UKL0 485 aa13.85□□□□□ -0.19
USP49-203ENST00000394253 PADI4Q9UM07 663 aa13.85□□□□□ -0.19
USP49-203ENST00000394253 DUOX2Q9NRD8 1548 aa13.85□□□□□ -0.19
USP49-203ENST00000394253 TMEM114B3SHH9 223 aa13.85□□□□□ -0.19
USP49-203ENST00000394253 PRODHO43272 600 aa13.85□□□□□ -0.19
USP49-203ENST00000394253 CLYBLQ8N0X4 340 aa13.85□□□□□ -0.19
USP49-203ENST00000394253 NPATQ14207 1427 aa13.85□□□□□ -0.19
USP49-203ENST00000394253 ZNF605Q86T29 641 aa13.85□□□□□ -0.19
USP49-203ENST00000394253 SULF1Q8IWU6 871 aa13.85□□□□□ -0.19
USP49-203ENST00000394253 KYQ8NBH2 561 aa13.85□□□□□ -0.19
USP49-203ENST00000394253 HPS1Q92902 700 aa13.85□□□□□ -0.19
USP49-203ENST00000394253 RNF112Q9ULX5 631 aa13.85□□□□□ -0.19
USP49-203ENST00000394253 VAV1P15498 845 aa13.85□□□□□ -0.19
USP49-203ENST00000394253 PDK1Q15118 436 aa13.85□□□□□ -0.19
USP49-203ENST00000394253 TYSND1Q2T9J0 566 aa13.85□□□□□ -0.19
USP49-203ENST00000394253 LBHD1Q9BQE6 289 aaPredicted RBP13.85□□□□□ -0.19
USP49-203ENST00000394253 ADGRL1O94910 1474 aa13.85□□□□□ -0.19
USP49-203ENST00000394253 OR14I1A6ND48 311 aa13.85□□□□□ -0.19
USP49-203ENST00000394253 H3BN98 237 aa13.85□□□□□ -0.19
USP49-203ENST00000394253 ALDH3A2P51648 485 aa13.85□□□□□ -0.19
USP49-203ENST00000394253 CCNG1P51959 295 aa13.85□□□□□ -0.19
USP49-203ENST00000394253 EEF1AKMT1Q8WVE0 214 aa13.85□□□□□ -0.19
USP49-203ENST00000394253 CITED4Q96RK1 184 aa13.85□□□□□ -0.19
USP49-203ENST00000394253 PRKD2Q9BZL6 878 aa13.85□□□□□ -0.19
USP49-203ENST00000394253 SLC30A1Q9Y6M5 507 aa13.85□□□□□ -0.19
USP49-203ENST00000394253 PRG4Q92954 1404 aaPredicted RBP13.84□□□□□ -0.19
USP49-203ENST00000394253 ST8SIA6P61647 398 aa13.84□□□□□ -0.19
USP49-203ENST00000394253 L1RE1Q9UN81 338 aa13.84□□□□□ -0.19
USP49-203ENST00000394253 LAMC1P11047 1609 aa13.84□□□□□ -0.19
USP49-203ENST00000394253 PECAM1P16284 738 aaPredicted RBP13.84□□□□□ -0.19
USP49-203ENST00000394253 CNTFP26441 200 aa13.84□□□□□ -0.19
USP49-203ENST00000394253 DUOXA2Q1HG44 320 aa13.84□□□□□ -0.19
USP49-203ENST00000394253 TWF2Q6IBS0 349 aaKnown RBP13.84□□□□□ -0.19
USP49-203ENST00000394253 SDR42E1Q8WUS8 393 aa13.84□□□□□ -0.19
USP49-203ENST00000394253 TSPAN18Q96SJ8 248 aa13.84□□□□□ -0.19
USP49-203ENST00000394253 DCUN1D5Q9BTE7 237 aa13.84□□□□□ -0.19
USP49-203ENST00000394253 GPN1Q9HCN4 374 aaPredicted RBP13.84□□□□□ -0.19
USP49-203ENST00000394253 IRAK1P51617 712 aa13.84□□□□□ -0.19
USP49-203ENST00000394253 FUT11Q495W5 492 aa13.84□□□□□ -0.19
USP49-203ENST00000394253 C11orf70Q9BRQ4 267 aa13.84□□□□□ -0.19
USP49-203ENST00000394253 SPON2Q9BUD6 331 aa13.84□□□□□ -0.19
USP49-203ENST00000394253 APOL5Q9BWW9 433 aa13.84□□□□□ -0.19
USP49-203ENST00000394253 GPC6Q9Y625 555 aaPredicted RBP13.84□□□□□ -0.19
USP49-203ENST00000394253 CDK13Q14004 1512 aaKnown RBP13.84□□□□□ -0.19
USP49-203ENST00000394253 KPNA1P52294 538 aaPredicted RBP13.84□□□□□ -0.19
USP49-203ENST00000394253 CDH18Q13634 790 aa13.84□□□□□ -0.19
USP49-203ENST00000394253 EFHC1Q5JVL4 640 aa13.84□□□□□ -0.19
USP49-203ENST00000394253 CCSAPQ6IQ19 270 aaPredicted RBP13.84□□□□□ -0.19
USP49-203ENST00000394253 ZDHHC13Q8IUH4 622 aa13.84□□□□□ -0.19
USP49-203ENST00000394253 KBTBD8Q8NFY9 601 aa13.84□□□□□ -0.19
USP49-203ENST00000394253 C2orf40Q9H1Z8 148 aa13.84□□□□□ -0.19
USP49-203ENST00000394253 WDR35Q9P2L0 1181 aa13.84□□□□□ -0.19
USP49-203ENST00000394253 A0A1W2PQC6 194 aa13.84□□□□□ -0.19
USP49-203ENST00000394253 RGS10O43665 173 aa13.84□□□□□ -0.19
USP49-203ENST00000394253 VCLP18206 1134 aa13.84□□□□□ -0.19
USP49-203ENST00000394253 VAC14Q08AM6 782 aa13.84□□□□□ -0.19
USP49-203ENST00000394253 RAB11FIP2Q7L804 512 aa13.84□□□□□ -0.19
USP49-203ENST00000394253 ZNF594Q96JF6 807 aaPredicted RBP13.84□□□□□ -0.19
USP49-203ENST00000394253 PRXQ9BXM0 1461 aa13.84□□□□□ -0.19
USP49-203ENST00000394253 A0A0D9SFI3 127 aa13.84□□□□□ -0.19
USP49-203ENST00000394253 EPB42P16452 691 aa13.84□□□□□ -0.19
USP49-203ENST00000394253 DRAP1Q14919 205 aaPredicted RBP13.84□□□□□ -0.19
USP49-203ENST00000394253 SNIP1Q8TAD8 396 aaKnown RBP13.84□□□□□ -0.19
USP49-203ENST00000394253 OTUD7AQ8TE49 926 aaPredicted RBP13.84□□□□□ -0.19
USP49-203ENST00000394253 LENG1Q96BZ8 264 aaPredicted RBP13.84□□□□□ -0.19
USP49-203ENST00000394253 NUDT12Q9BQG2 462 aa13.84□□□□□ -0.19
USP49-203ENST00000394253 KANSL2Q9H9L4 492 aa13.84□□□□□ -0.19
USP49-203ENST00000394253 COPS7BQ9H9Q2 264 aaPredicted RBP13.84□□□□□ -0.19
USP49-203ENST00000394253 TAGLN3Q9UI15 199 aa13.84□□□□□ -0.19
USP49-203ENST00000394253 CHKBQ9Y259 395 aa13.84□□□□□ -0.19
USP49-203ENST00000394253 IFT140Q96RY7 1462 aa13.84□□□□□ -0.19
USP49-203ENST00000394253 ATP1A1P05023 1023 aaKnown RBP13.84□□□□□ -0.19
USP49-203ENST00000394253 IL12AP29459 219 aa13.84□□□□□ -0.19
USP49-203ENST00000394253 C11orf96Q7Z7L8 435 aa13.84□□□□□ -0.19
USP49-203ENST00000394253 GRAMD1CQ8IYS0 662 aa13.84□□□□□ -0.19
USP49-203ENST00000394253 C4orf33Q8N1A6 199 aa13.84□□□□□ -0.19
USP49-203ENST00000394253 STN1Q9H668 368 aaKnown RBP13.84□□□□□ -0.19
USP49-203ENST00000394253 DBR1Q9UK59 544 aaKnown RBP13.84□□□□□ -0.19
USP49-203ENST00000394253 MROH7Q68CQ1 1323 aa13.84□□□□□ -0.19
USP49-203ENST00000394253 ASMTLO95671 621 aa13.84□□□□□ -0.19
USP49-203ENST00000394253 ITIH1P19827 911 aa13.84□□□□□ -0.19
USP49-203ENST00000394253 PTPN7P35236 360 aa13.84□□□□□ -0.19
USP49-203ENST00000394253 STAT3P40763 770 aa13.84□□□□□ -0.19
USP49-203ENST00000394253 EIF4A2Q14240 407 aaKnown RBP13.84□□□□□ -0.19
USP49-203ENST00000394253 SLC29A2Q14542 456 aa13.84□□□□□ -0.19
USP49-203ENST00000394253 ZFP69Q49AA0 526 aa13.84□□□□□ -0.19
USP49-203ENST00000394253 ANKRD26P1Q6NSI1 321 aa13.84□□□□□ -0.19
USP49-203ENST00000394253 DCPSQ96C86 337 aaKnown RBP13.84□□□□□ -0.19
USP49-203ENST00000394253 CATSPERBQ9H7T0 1116 aa13.84□□□□□ -0.19
USP49-203ENST00000394253 ZNF211Q13398 564 aaPredicted RBP13.83□□□□□ -0.19
USP49-203ENST00000394253 BTBD8Q5XKL5 378 aa13.83□□□□□ -0.19
USP49-203ENST00000394253 NUDT5Q9UKK9 219 aa13.83□□□□□ -0.19
USP49-203ENST00000394253 TFE3P19532 575 aaPredicted RBP13.83□□□□□ -0.2
USP49-203ENST00000394253 PYDC2Q56P42 97 aa13.83□□□□□ -0.2
USP49-203ENST00000394253 SLC22A9Q8IVM8 553 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms