RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 PAX7P23759 505 aa19.67■□□□□ 0.74
CBX1-202ENST00000393408 EDNRBP24530 442 aa19.67■□□□□ 0.74
CBX1-202ENST00000393408 CDC25CP30307 473 aa19.67■□□□□ 0.74
CBX1-202ENST00000393408 ZNF200P98182 395 aaPredicted RBP19.67■□□□□ 0.74
CBX1-202ENST00000393408 ROR1Q01973 937 aa19.67■□□□□ 0.74
CBX1-202ENST00000393408 FAAP100Q0VG06 881 aa19.67■□□□□ 0.74
CBX1-202ENST00000393408 NOMO1Q15155 1222 aa19.67■□□□□ 0.74
CBX1-202ENST00000393408 KBTBD12Q3ZCT8 623 aa19.67■□□□□ 0.74
CBX1-202ENST00000393408 NPNTQ6UXI9 565 aa19.67■□□□□ 0.74
CBX1-202ENST00000393408 FBXO41Q8TF61 875 aa19.67■□□□□ 0.74
CBX1-202ENST00000393408 TWNKQ96RR1 684 aa19.67■□□□□ 0.74
CBX1-202ENST00000393408 CAMKK2Q96RR4 588 aa19.67■□□□□ 0.74
CBX1-202ENST00000393408 C2orf40Q9H1Z8 148 aa19.67■□□□□ 0.74
CBX1-202ENST00000393408 KCNK13Q9HB14 408 aa19.67■□□□□ 0.74
CBX1-202ENST00000393408 WDR90Q96KV7 1748 aa19.67■□□□□ 0.74
CBX1-202ENST00000393408 ZBTB42B2RXF5 422 aa19.67■□□□□ 0.74
CBX1-202ENST00000393408 ENTPD5O75356 428 aa19.67■□□□□ 0.74
CBX1-202ENST00000393408 ENDOD1O94919 500 aa19.67■□□□□ 0.74
CBX1-202ENST00000393408 HAUS5O94927 633 aa19.67■□□□□ 0.74
CBX1-202ENST00000393408 TGDSO95455 350 aa19.67■□□□□ 0.74
CBX1-202ENST00000393408 KRT19P08727 400 aa19.67■□□□□ 0.74
CBX1-202ENST00000393408 STIP1P31948 543 aaKnown RBP19.67■□□□□ 0.74
CBX1-202ENST00000393408 GABRB2P47870 512 aa19.67■□□□□ 0.74
CBX1-202ENST00000393408 EN1Q05925 392 aaPredicted RBP19.67■□□□□ 0.74
CBX1-202ENST00000393408 MMRN1Q13201 1228 aa19.67■□□□□ 0.74
CBX1-202ENST00000393408 PRKD1Q15139 912 aaPredicted RBP19.67■□□□□ 0.74
CBX1-202ENST00000393408 EEF1DP3Q658K8 133 aa19.67■□□□□ 0.74
CBX1-202ENST00000393408 DARS2Q6PI48 645 aaKnown RBP19.67■□□□□ 0.74
CBX1-202ENST00000393408 CADM1Q9BY67 442 aaKnown RBP19.67■□□□□ 0.74
CBX1-202ENST00000393408 ARL8BQ9NVJ2 186 aa19.67■□□□□ 0.74
CBX1-202ENST00000393408 HMGXB4Q9UGU5 601 aa19.67■□□□□ 0.74
CBX1-202ENST00000393408 IKBKGQ9Y6K9 419 aa19.67■□□□□ 0.74
CBX1-202ENST00000393408 IGKV6-21A0A0C4DH24 114 aa19.66■□□□□ 0.74
CBX1-202ENST00000393408 LIN7AO14910 233 aaPredicted RBP19.66■□□□□ 0.74
CBX1-202ENST00000393408 GAS2O43903 313 aaKnown RBP19.66■□□□□ 0.74
CBX1-202ENST00000393408 PEX10O60683 326 aa19.66■□□□□ 0.74
CBX1-202ENST00000393408 DNAJC6O75061 913 aa19.66■□□□□ 0.74
CBX1-202ENST00000393408 MICAL2O94851 1124 aa19.66■□□□□ 0.74
CBX1-202ENST00000393408 LUC7L3O95232 432 aaKnown RBP19.66■□□□□ 0.74
CBX1-202ENST00000393408 ABL2P42684 1182 aa19.66■□□□□ 0.74
CBX1-202ENST00000393408 ARFIP2P53365 341 aa19.66■□□□□ 0.74
CBX1-202ENST00000393408 PTPN11Q06124 597 aaPredicted RBP19.66■□□□□ 0.74
CBX1-202ENST00000393408 BLMHQ13867 455 aa19.66■□□□□ 0.74
CBX1-202ENST00000393408 ATF7IP2Q5U623 682 aa19.66■□□□□ 0.74
CBX1-202ENST00000393408 METTL7BQ6UX53 244 aa19.66■□□□□ 0.74
CBX1-202ENST00000393408 SKA1Q96BD8 255 aa19.66■□□□□ 0.74
CBX1-202ENST00000393408 FAM111AQ96PZ2 611 aa19.66■□□□□ 0.74
CBX1-202ENST00000393408 ELOVL4Q9GZR5 314 aa19.66■□□□□ 0.74
CBX1-202ENST00000393408 SMYD3Q9H7B4 428 aa19.66■□□□□ 0.74
CBX1-202ENST00000393408 SOWAHBA6NEL2 793 aa19.66■□□□□ 0.74
CBX1-202ENST00000393408 ACKR2O00590 384 aa19.66■□□□□ 0.74
CBX1-202ENST00000393408 CCDC22O60826 627 aa19.66■□□□□ 0.74
CBX1-202ENST00000393408 INHBAP08476 426 aa19.66■□□□□ 0.74
CBX1-202ENST00000393408 PCK1P35558 622 aa19.66■□□□□ 0.74
CBX1-202ENST00000393408 CBLBQ13191 982 aa19.66■□□□□ 0.74
CBX1-202ENST00000393408 CYP4V2Q6ZWL3 525 aaPredicted RBP19.66■□□□□ 0.74
CBX1-202ENST00000393408 ZC3H18Q86VM9 953 aaKnown RBP19.66■□□□□ 0.74
CBX1-202ENST00000393408 TMEM130Q8N3G9 435 aa19.66■□□□□ 0.74
CBX1-202ENST00000393408 FAXDC2Q96IV6 333 aa19.66■□□□□ 0.74
CBX1-202ENST00000393408 TUBB6Q9BUF5 446 aa19.66■□□□□ 0.74
CBX1-202ENST00000393408 ASNSD1Q9NWL6 643 aa19.66■□□□□ 0.74
CBX1-202ENST00000393408 CNTN3Q9P232 1028 aa19.66■□□□□ 0.74
CBX1-202ENST00000393408 MTO1Q9Y2Z2 717 aaKnown RBP19.66■□□□□ 0.74
CBX1-202ENST00000393408 B4GALT5O43286 388 aa19.65■□□□□ 0.74
CBX1-202ENST00000393408 SPAG6O75602 509 aa19.65■□□□□ 0.74
CBX1-202ENST00000393408 SMNDC1O75940 238 aaKnown RBP eCLIP19.65■□□□□ 0.74
CBX1-202ENST00000393408 IL1BP01584 269 aa19.65■□□□□ 0.74
CBX1-202ENST00000393408 CXCL8P10145 99 aa19.65■□□□□ 0.74
CBX1-202ENST00000393408 PYGBP11216 843 aa19.65■□□□□ 0.74
CBX1-202ENST00000393408 YWHAGP61981 247 aaKnown RBP eCLIP19.65■□□□□ 0.74
CBX1-202ENST00000393408 CDK16Q00536 496 aa19.65■□□□□ 0.74
CBX1-202ENST00000393408 RFWD3Q6PCD5 774 aa19.65■□□□□ 0.74
CBX1-202ENST00000393408 C4orf50Q6ZRC1 276 aa19.65■□□□□ 0.74
CBX1-202ENST00000393408 CDR2LQ86X02 465 aaPredicted RBP19.65■□□□□ 0.74
CBX1-202ENST00000393408 TMEM192Q8IY95 271 aa19.65■□□□□ 0.74
CBX1-202ENST00000393408 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP19.65■□□□□ 0.74
CBX1-202ENST00000393408 BTBD10Q9BSF8 475 aa19.65■□□□□ 0.74
CBX1-202ENST00000393408 TMEM120AQ9BXJ8 343 aa19.65■□□□□ 0.74
CBX1-202ENST00000393408 TRIM6Q9C030 488 aaPredicted RBP19.65■□□□□ 0.74
CBX1-202ENST00000393408 FZD8Q9H461 694 aa19.65■□□□□ 0.74
CBX1-202ENST00000393408 PNPLA8Q9NP80 782 aa19.65■□□□□ 0.74
CBX1-202ENST00000393408 PIM2Q9P1W9 311 aa19.65■□□□□ 0.74
CBX1-202ENST00000393408 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.65■□□□□ 0.74
CBX1-202ENST00000393408 A0A0G2JMZ2 1700 aa19.65■□□□□ 0.74
CBX1-202ENST00000393408 LRRC37A2A6NM11 1700 aa19.65■□□□□ 0.74
CBX1-202ENST00000393408 CFAP69A5D8W1 941 aa19.65■□□□□ 0.74
CBX1-202ENST00000393408 CHADO15335 359 aa19.65■□□□□ 0.74
CBX1-202ENST00000393408 DLDP09622 509 aaKnown RBP19.65■□□□□ 0.74
CBX1-202ENST00000393408 BGNP21810 368 aa19.65■□□□□ 0.74
CBX1-202ENST00000393408 ZNF143P52747 638 aaPredicted RBP19.65■□□□□ 0.74
CBX1-202ENST00000393408 WDR78Q5VTH9 848 aa19.65■□□□□ 0.74
CBX1-202ENST00000393408 C1orf127Q8N9H9 656 aa19.65■□□□□ 0.74
CBX1-202ENST00000393408 TTC17Q96AE7 1141 aa19.65■□□□□ 0.74
CBX1-202ENST00000393408 KLRG1Q96E93 195 aa19.65■□□□□ 0.74
CBX1-202ENST00000393408 NSL1Q96IY1 281 aa19.65■□□□□ 0.74
CBX1-202ENST00000393408 ADPGKQ9BRR6 497 aa19.65■□□□□ 0.74
CBX1-202ENST00000393408 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.65■□□□□ 0.74
CBX1-202ENST00000393408 H0Y3Z8 333 aa19.64■□□□□ 0.74
CBX1-202ENST00000393408 CILPO75339 1184 aa19.64■□□□□ 0.74
CBX1-202ENST00000393408 AVILO75366 819 aa19.64■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms