RNA–Protein interactions for RNA: ENST00000393357.6

PHTF1-205, Transcript of putative homeodomain transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHTF1, Length 3,244 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-205ENST00000393357 PDK3Q15120 406 aa17.06■□□□□ 0.32
PHTF1-205ENST00000393357 PRKD1Q15139 912 aaPredicted RBP17.06■□□□□ 0.32
PHTF1-205ENST00000393357 ZNF276Q8N554 614 aa17.06■□□□□ 0.32
PHTF1-205ENST00000393357 GSDMBQ8TAX9 411 aa17.06■□□□□ 0.32
PHTF1-205ENST00000393357 SPATA18Q8TC71 538 aa17.06■□□□□ 0.32
PHTF1-205ENST00000393357 ZFAND2BQ8WV99 257 aa17.06■□□□□ 0.32
PHTF1-205ENST00000393357 USP13Q92995 863 aaPredicted RBP17.06■□□□□ 0.32
PHTF1-205ENST00000393357 TMEM143Q96AN5 459 aa17.06■□□□□ 0.32
PHTF1-205ENST00000393357 CCPG1Q9ULG6 757 aa17.06■□□□□ 0.32
PHTF1-205ENST00000393357 PLA2G4CQ9UP65 541 aa17.06■□□□□ 0.32
PHTF1-205ENST00000393357 DNAJC16Q9Y2G8 782 aa17.06■□□□□ 0.32
PHTF1-205ENST00000393357 WDR64B1ANS9 1081 aa17.05■□□□□ 0.32
PHTF1-205ENST00000393357 E9PBE3 544 aa17.05■□□□□ 0.32
PHTF1-205ENST00000393357 ITM2AO43736 263 aa17.05■□□□□ 0.32
PHTF1-205ENST00000393357 KLHL41O60662 606 aa17.05■□□□□ 0.32
PHTF1-205ENST00000393357 P4HBP07237 508 aaKnown RBP17.05■□□□□ 0.32
PHTF1-205ENST00000393357 VCLP18206 1134 aa17.05■□□□□ 0.32
PHTF1-205ENST00000393357 FUT4P22083 530 aa17.05■□□□□ 0.32
PHTF1-205ENST00000393357 LMNB2Q03252 620 aa17.05■□□□□ 0.32
PHTF1-205ENST00000393357 MTERF2Q49AM1 385 aa17.05■□□□□ 0.32
PHTF1-205ENST00000393357 KCTD21Q4G0X4 260 aa17.05■□□□□ 0.32
PHTF1-205ENST00000393357 EFHC2Q5JST6 749 aa17.05■□□□□ 0.32
PHTF1-205ENST00000393357 RNF111Q6ZNA4 994 aa17.05■□□□□ 0.32
PHTF1-205ENST00000393357 MON1BQ7L1V2 547 aa17.05■□□□□ 0.32
PHTF1-205ENST00000393357 SDCCAG8Q86SQ7 713 aaPredicted RBP17.05■□□□□ 0.32
PHTF1-205ENST00000393357 CCDC17Q96LX7 622 aa17.05■□□□□ 0.32
PHTF1-205ENST00000393357 APOBEC3GQ9HC16 384 aaKnown RBP17.05■□□□□ 0.32
PHTF1-205ENST00000393357 COL20A1Q9P218 1284 aa17.05■□□□□ 0.32
PHTF1-205ENST00000393357 CIITAP33076 1130 aa17.05■□□□□ 0.32
PHTF1-205ENST00000393357 RFC1P35251 1148 aaPredicted RBP17.05■□□□□ 0.32
PHTF1-205ENST00000393357 MYBPC3Q14896 1274 aa17.05■□□□□ 0.32
PHTF1-205ENST00000393357 SLC15A2Q16348 729 aa17.05■□□□□ 0.32
PHTF1-205ENST00000393357 HSF5Q4G112 596 aaPredicted RBP17.05■□□□□ 0.32
PHTF1-205ENST00000393357 TFDP3Q5H9I0 405 aa17.05■□□□□ 0.32
PHTF1-205ENST00000393357 MOXD1Q6UVY6 613 aa17.05■□□□□ 0.32
PHTF1-205ENST00000393357 LDHDQ86WU2 507 aa17.05■□□□□ 0.32
PHTF1-205ENST00000393357 ITFG2Q969R8 447 aa17.05■□□□□ 0.32
PHTF1-205ENST00000393357 VPS11Q9H270 941 aa17.05■□□□□ 0.32
PHTF1-205ENST00000393357 MMADHCQ9H3L0 296 aaPredicted RBP17.05■□□□□ 0.32
PHTF1-205ENST00000393357 TLE6Q9H808 572 aa17.05■□□□□ 0.32
PHTF1-205ENST00000393357 SLC24A2Q9UI40 661 aa17.05■□□□□ 0.32
PHTF1-205ENST00000393357 ABHD2P08910 425 aa17.04■□□□□ 0.32
PHTF1-205ENST00000393357 PMLP29590 882 aa17.04■□□□□ 0.32
PHTF1-205ENST00000393357 NOMO3P69849 1222 aa17.04■□□□□ 0.32
PHTF1-205ENST00000393357 CYP24A1Q07973 514 aa17.04■□□□□ 0.32
PHTF1-205ENST00000393357 KLHL38Q2WGJ6 581 aa17.04■□□□□ 0.32
PHTF1-205ENST00000393357 TDRD10Q5VZ19 366 aaKnown RBP17.04■□□□□ 0.32
PHTF1-205ENST00000393357 SLC39A4Q6P5W5 647 aa17.04■□□□□ 0.32
PHTF1-205ENST00000393357 TRMT10BQ6PF06 316 aaKnown RBP17.04■□□□□ 0.32
PHTF1-205ENST00000393357 PPIL6Q8IXY8 311 aa17.04■□□□□ 0.32
PHTF1-205ENST00000393357 KATNAL2Q8IYT4 538 aa17.04■□□□□ 0.32
PHTF1-205ENST00000393357 OR5B17Q8NGF7 314 aa17.04■□□□□ 0.32
PHTF1-205ENST00000393357 PPP2R3CQ969Q6 453 aa17.04■□□□□ 0.32
PHTF1-205ENST00000393357 TMX4Q9H1E5 349 aaPredicted RBP17.04■□□□□ 0.32
PHTF1-205ENST00000393357 TAGLN3Q9UI15 199 aa17.04■□□□□ 0.32
PHTF1-205ENST00000393357 CCDC78A2IDD5 438 aa17.04■□□□□ 0.32
PHTF1-205ENST00000393357 KRT19P08727 400 aa17.04■□□□□ 0.32
PHTF1-205ENST00000393357 MAGEA10P43363 369 aaPredicted RBP17.04■□□□□ 0.32
PHTF1-205ENST00000393357 NOVP48745 357 aa17.04■□□□□ 0.32
PHTF1-205ENST00000393357 PGGT1BP53609 377 aa17.04■□□□□ 0.32
PHTF1-205ENST00000393357 MTMR1Q13613 665 aa17.04■□□□□ 0.32
PHTF1-205ENST00000393357 IL31Q6EBC2 164 aa17.04■□□□□ 0.32
PHTF1-205ENST00000393357 RCOR2Q8IZ40 523 aa17.04■□□□□ 0.32
PHTF1-205ENST00000393357 JOSD2Q8TAC2 188 aa17.04■□□□□ 0.32
PHTF1-205ENST00000393357 ACSS3Q9H6R3 686 aa17.04■□□□□ 0.32
PHTF1-205ENST00000393357 PARVAQ9NVD7 372 aa17.04■□□□□ 0.32
PHTF1-205ENST00000393357 FAM198AQ9UFP1 575 aa17.04■□□□□ 0.32
PHTF1-205ENST00000393357 SEPT9Q9UHD8 586 aaPredicted RBP17.04■□□□□ 0.32
PHTF1-205ENST00000393357 INPP5FQ9Y2H2 1132 aa17.04■□□□□ 0.32
PHTF1-205ENST00000393357 NUB1Q9Y5A7 615 aa17.04■□□□□ 0.32
PHTF1-205ENST00000393357 LAMB1P07942 1786 aa17.04■□□□□ 0.32
PHTF1-205ENST00000393357 NOP56O00567 594 aaKnown RBP17.04■□□□□ 0.32
PHTF1-205ENST00000393357 ABLIM1O14639 778 aa17.04■□□□□ 0.32
PHTF1-205ENST00000393357 DCXO43602 365 aa17.04■□□□□ 0.32
PHTF1-205ENST00000393357 DKC1O60832 514 aaKnown RBP eCLIP17.04■□□□□ 0.32
PHTF1-205ENST00000393357 TM7SF2O76062 418 aa17.04■□□□□ 0.32
PHTF1-205ENST00000393357 PKNOX1P55347 436 aa17.04■□□□□ 0.32
PHTF1-205ENST00000393357 R3HDM1Q15032 1099 aaKnown RBP17.04■□□□□ 0.32
PHTF1-205ENST00000393357 EFHC1Q5JVL4 640 aa17.04■□□□□ 0.32
PHTF1-205ENST00000393357 SH3PXD2AQ5TCZ1 1133 aa17.04■□□□□ 0.32
PHTF1-205ENST00000393357 GPAT2Q6NUI2 795 aa17.04■□□□□ 0.32
PHTF1-205ENST00000393357 FBXL19Q6PCT2 694 aa17.04■□□□□ 0.32
PHTF1-205ENST00000393357 ADGRD1Q6QNK2 874 aa17.04■□□□□ 0.32
PHTF1-205ENST00000393357 DHDDSQ86SQ9 333 aa17.04■□□□□ 0.32
PHTF1-205ENST00000393357 SLC9A9Q8IVB4 645 aa17.04■□□□□ 0.32
PHTF1-205ENST00000393357 ZNF606Q8WXB4 792 aa17.04■□□□□ 0.32
PHTF1-205ENST00000393357 RBM17Q96I25 401 aaKnown RBP17.04■□□□□ 0.32
PHTF1-205ENST00000393357 APOPT1Q96IL0 206 aa17.04■□□□□ 0.32
PHTF1-205ENST00000393357 CEP41Q9BYV8 373 aa17.04■□□□□ 0.32
PHTF1-205ENST00000393357 UNKQ9C0B0 810 aaKnown RBP17.04■□□□□ 0.32
PHTF1-205ENST00000393357 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.04■□□□□ 0.32
PHTF1-205ENST00000393357 PNPOQ9NVS9 261 aa17.04■□□□□ 0.32
PHTF1-205ENST00000393357 PSTPIP1O43586 416 aa17.03■□□□□ 0.32
PHTF1-205ENST00000393357 IL1R2P27930 398 aa17.03■□□□□ 0.32
PHTF1-205ENST00000393357 FOLH1Q04609 750 aa17.03■□□□□ 0.32
PHTF1-205ENST00000393357 ZNF252P-AS1Q0IIN9 211 aa17.03■□□□□ 0.32
PHTF1-205ENST00000393357 CES3Q6UWW8 571 aa17.03■□□□□ 0.32
PHTF1-205ENST00000393357 MAP7D3Q8IWC1 876 aa17.03■□□□□ 0.32
PHTF1-205ENST00000393357 FAM156AQ8NDB6 213 aa17.03■□□□□ 0.32
PHTF1-205ENST00000393357 HSPBAP1Q96EW2 488 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms