RNA–Protein interactions for RNA: ENST00000392556.8

TRAF3IP2-208, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best) BASIC

Gene TRAF3IP2, Length 2,188 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-208ENST00000392556 CETN3O15182 167 aa12□□□□□ -0.49
TRAF3IP2-208ENST00000392556 NVLO15381 856 aaKnown RBP12□□□□□ -0.49
TRAF3IP2-208ENST00000392556 CSDE1O75534 798 aaKnown RBP12□□□□□ -0.49
TRAF3IP2-208ENST00000392556 TJP3O95049 919 aa12□□□□□ -0.49
TRAF3IP2-208ENST00000392556 SERPINB4P48594 390 aa12□□□□□ -0.49
TRAF3IP2-208ENST00000392556 PTDSS1P48651 473 aaKnown RBP12□□□□□ -0.49
TRAF3IP2-208ENST00000392556 PTENP60484 403 aa12□□□□□ -0.49
TRAF3IP2-208ENST00000392556 KPNB1Q14974 876 aaKnown RBP12□□□□□ -0.49
TRAF3IP2-208ENST00000392556 KRT71Q3SY84 523 aa12□□□□□ -0.49
TRAF3IP2-208ENST00000392556 HOOK3Q86VS8 718 aa12□□□□□ -0.49
TRAF3IP2-208ENST00000392556 TDRD5Q8NAT2 981 aaKnown RBP12□□□□□ -0.49
TRAF3IP2-208ENST00000392556 RNF149Q8NC42 400 aa12□□□□□ -0.49
TRAF3IP2-208ENST00000392556 UCMAQ8WVF2 138 aa12□□□□□ -0.49
TRAF3IP2-208ENST00000392556 PGM2Q96G03 612 aa12□□□□□ -0.49
TRAF3IP2-208ENST00000392556 PAGE5Q96GU1 130 aa12□□□□□ -0.49
TRAF3IP2-208ENST00000392556 HIC2Q96JB3 615 aa12□□□□□ -0.49
TRAF3IP2-208ENST00000392556 KRT12Q99456 494 aa12□□□□□ -0.49
TRAF3IP2-208ENST00000392556 TMEM59LQ9UK28 342 aa12□□□□□ -0.49
TRAF3IP2-208ENST00000392556 TMED5Q9Y3A6 229 aa12□□□□□ -0.49
TRAF3IP2-208ENST00000392556 CES2O00748 559 aa11.99□□□□□ -0.49
TRAF3IP2-208ENST00000392556 ZNF263O14978 683 aa11.99□□□□□ -0.49
TRAF3IP2-208ENST00000392556 ASLP04424 464 aa11.99□□□□□ -0.49
TRAF3IP2-208ENST00000392556 SRGAP2CP0DJJ0 459 aa11.99□□□□□ -0.49
TRAF3IP2-208ENST00000392556 ITGA4P13612 1032 aa11.99□□□□□ -0.49
TRAF3IP2-208ENST00000392556 HOXA11P31270 313 aaPredicted RBP11.99□□□□□ -0.49
TRAF3IP2-208ENST00000392556 HNRNPH3P31942 346 aaKnown RBP11.99□□□□□ -0.49
TRAF3IP2-208ENST00000392556 CXCR5P32302 372 aa11.99□□□□□ -0.49
TRAF3IP2-208ENST00000392556 SLC11A1P49279 550 aa11.99□□□□□ -0.49
TRAF3IP2-208ENST00000392556 CREMQ03060 361 aa11.99□□□□□ -0.49
TRAF3IP2-208ENST00000392556 MYBPC2Q14324 1141 aa11.99□□□□□ -0.49
TRAF3IP2-208ENST00000392556 SAFBQ15424 915 aaKnown RBP eCLIP11.99□□□□□ -0.49
TRAF3IP2-208ENST00000392556 CALCRLQ16602 461 aa11.99□□□□□ -0.49
TRAF3IP2-208ENST00000392556 MUM1Q2TAK8 710 aa11.99□□□□□ -0.49
TRAF3IP2-208ENST00000392556 FIGNQ5HY92 759 aa11.99□□□□□ -0.49
TRAF3IP2-208ENST00000392556 KLHDC7AQ5VTJ3 777 aa11.99□□□□□ -0.49
TRAF3IP2-208ENST00000392556 DAB2IPQ5VWQ8 1189 aa11.99□□□□□ -0.49
TRAF3IP2-208ENST00000392556 AGMOQ6ZNB7 445 aa11.99□□□□□ -0.49
TRAF3IP2-208ENST00000392556 C15orf39Q6ZRI6 1047 aa11.99□□□□□ -0.49
TRAF3IP2-208ENST00000392556 CABP7Q86V35 215 aa11.99□□□□□ -0.49
TRAF3IP2-208ENST00000392556 KSR1Q8IVT5 923 aa11.99□□□□□ -0.49
TRAF3IP2-208ENST00000392556 CMASQ8NFW8 434 aaPredicted RBP11.99□□□□□ -0.49
TRAF3IP2-208ENST00000392556 TNFRSF25Q93038 417 aa11.99□□□□□ -0.49
TRAF3IP2-208ENST00000392556 ACSF2Q96CM8 615 aaPredicted RBP11.99□□□□□ -0.49
TRAF3IP2-208ENST00000392556 ASIC4Q96FT7 647 aa11.99□□□□□ -0.49
TRAF3IP2-208ENST00000392556 DYDC2Q96IM9 177 aa11.99□□□□□ -0.49
TRAF3IP2-208ENST00000392556 NR1H4Q96RI1 486 aaPredicted RBP11.99□□□□□ -0.49
TRAF3IP2-208ENST00000392556 HSD17B14Q9BPX1 270 aa11.99□□□□□ -0.49
TRAF3IP2-208ENST00000392556 MRPL17Q9NRX2 175 aaKnown RBP11.99□□□□□ -0.49
TRAF3IP2-208ENST00000392556 HSFX1Q9UBD0 423 aa11.99□□□□□ -0.49
TRAF3IP2-208ENST00000392556 FBXL5Q9UKA1 691 aa11.99□□□□□ -0.49
TRAF3IP2-208ENST00000392556 INPP5FQ9Y2H2 1132 aa11.99□□□□□ -0.49
TRAF3IP2-208ENST00000392556 GIT1Q9Y2X7 761 aa11.99□□□□□ -0.49
TRAF3IP2-208ENST00000392556 ARL2BPQ9Y2Y0 163 aa11.99□□□□□ -0.49
TRAF3IP2-208ENST00000392556 RAD51CO43502 376 aa11.99□□□□□ -0.49
TRAF3IP2-208ENST00000392556 GFPT2O94808 682 aa11.99□□□□□ -0.49
TRAF3IP2-208ENST00000392556 SLITRK3O94933 977 aa11.99□□□□□ -0.49
TRAF3IP2-208ENST00000392556 SOD2P04179 222 aa11.99□□□□□ -0.49
TRAF3IP2-208ENST00000392556 HARSP12081 509 aaKnown RBP11.99□□□□□ -0.49
TRAF3IP2-208ENST00000392556 EEF1GP26641 437 aaKnown RBP11.99□□□□□ -0.49
TRAF3IP2-208ENST00000392556 CA8P35219 290 aa11.99□□□□□ -0.49
TRAF3IP2-208ENST00000392556 VHLP40337 213 aa11.99□□□□□ -0.49
TRAF3IP2-208ENST00000392556 OXCT1P55809 520 aa11.99□□□□□ -0.49
TRAF3IP2-208ENST00000392556 SESN3P58005 492 aa11.99□□□□□ -0.49
TRAF3IP2-208ENST00000392556 PAK1Q13153 545 aa11.99□□□□□ -0.49
TRAF3IP2-208ENST00000392556 UBXN11Q5T124 520 aa11.99□□□□□ -0.49
TRAF3IP2-208ENST00000392556 ALYREFQ86V81 257 aaKnown RBP11.99□□□□□ -0.49
TRAF3IP2-208ENST00000392556 WDR60Q8WVS4 1066 aa11.99□□□□□ -0.49
TRAF3IP2-208ENST00000392556 LPPQ93052 612 aa11.99□□□□□ -0.49
TRAF3IP2-208ENST00000392556 UTP4Q969X6 686 aaKnown RBP11.99□□□□□ -0.49
TRAF3IP2-208ENST00000392556 TMEM143Q96AN5 459 aa11.99□□□□□ -0.49
TRAF3IP2-208ENST00000392556 EIF2AK1Q9BQI3 630 aaKnown RBP11.99□□□□□ -0.49
TRAF3IP2-208ENST00000392556 SH2D3AQ9BRG2 576 aa11.99□□□□□ -0.49
TRAF3IP2-208ENST00000392556 HERC2P3Q9BVR0 1158 aa11.99□□□□□ -0.49
TRAF3IP2-208ENST00000392556 CSRNP2Q9H175 543 aa11.99□□□□□ -0.49
TRAF3IP2-208ENST00000392556 LRMDAQ9H2I8 198 aa11.99□□□□□ -0.49
TRAF3IP2-208ENST00000392556 RHBDL2Q9NX52 303 aa11.99□□□□□ -0.49
TRAF3IP2-208ENST00000392556 IL1RAPL1Q9NZN1 696 aa11.99□□□□□ -0.49
TRAF3IP2-208ENST00000392556 TBC1D30Q9Y2I9 924 aa11.99□□□□□ -0.49
TRAF3IP2-208ENST00000392556 NT5C1B-RDH14C9J2C7 533 aa11.98□□□□□ -0.49
TRAF3IP2-208ENST00000392556 UNC5CO95185 931 aa11.98□□□□□ -0.49
TRAF3IP2-208ENST00000392556 GNA14O95837 355 aa11.98□□□□□ -0.49
TRAF3IP2-208ENST00000392556 URODP06132 367 aa11.98□□□□□ -0.49
TRAF3IP2-208ENST00000392556 CD97P48960 835 aa11.98□□□□□ -0.49
TRAF3IP2-208ENST00000392556 CYP27A1Q02318 531 aa11.98□□□□□ -0.49
TRAF3IP2-208ENST00000392556 PLOD1Q02809 727 aaPredicted RBP11.98□□□□□ -0.49
TRAF3IP2-208ENST00000392556 HLTFQ14527 1009 aaKnown RBP eCLIP11.98□□□□□ -0.49
TRAF3IP2-208ENST00000392556 OTOP3Q7RTS5 596 aa11.98□□□□□ -0.49
TRAF3IP2-208ENST00000392556 GPR149Q86SP6 731 aa11.98□□□□□ -0.49
TRAF3IP2-208ENST00000392556 CROCCP2Q86T23 111 aa11.98□□□□□ -0.49
TRAF3IP2-208ENST00000392556 TPH2Q8IWU9 490 aa11.98□□□□□ -0.49
TRAF3IP2-208ENST00000392556 MCPH1Q8NEM0 835 aa11.98□□□□□ -0.49
TRAF3IP2-208ENST00000392556 ERMNQ8TAM6 284 aa11.98□□□□□ -0.49
TRAF3IP2-208ENST00000392556 OXER1Q8TDS5 423 aa11.98□□□□□ -0.49
TRAF3IP2-208ENST00000392556 CCDC42Q96M95 316 aa11.98□□□□□ -0.49
TRAF3IP2-208ENST00000392556 CATSPER2Q96P56 530 aa11.98□□□□□ -0.49
TRAF3IP2-208ENST00000392556 KLHL5Q96PQ7 755 aa11.98□□□□□ -0.49
TRAF3IP2-208ENST00000392556 NUDCD1Q96RS6 583 aa11.98□□□□□ -0.49
TRAF3IP2-208ENST00000392556 POMKQ9H5K3 350 aa11.98□□□□□ -0.49
TRAF3IP2-208ENST00000392556 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.98□□□□□ -0.49
TRAF3IP2-208ENST00000392556 TXLNGQ9NUQ3 528 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms