RNA–Protein interactions for RNA: ENST00000392481.6

RFC4-202, Transcript of replication factor C subunit 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFC4, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-202ENST00000392481 ZFHX2Q9C0A1 2572 aaPredicted RBP12.54□□□□□ -0.4
RFC4-202ENST00000392481 GOLGA6L22H0YM25 854 aa12.54□□□□□ -0.4
RFC4-202ENST00000392481 HDCP19113 662 aa12.54□□□□□ -0.4
RFC4-202ENST00000392481 CD72P21854 359 aa12.54□□□□□ -0.4
RFC4-202ENST00000392481 TBXAS1P24557 533 aaPredicted RBP12.54□□□□□ -0.4
RFC4-202ENST00000392481 ADORA2BP29275 332 aa12.54□□□□□ -0.4
RFC4-202ENST00000392481 PLA2G5P39877 138 aa12.54□□□□□ -0.4
RFC4-202ENST00000392481 SLC5A3P53794 718 aa12.54□□□□□ -0.4
RFC4-202ENST00000392481 RAD23BP54727 409 aa12.54□□□□□ -0.4
RFC4-202ENST00000392481 MAP3K7CLP57077 242 aa12.54□□□□□ -0.4
RFC4-202ENST00000392481 YWHAEP62258 255 aaKnown RBP12.54□□□□□ -0.4
RFC4-202ENST00000392481 TCF15Q12870 199 aa12.54□□□□□ -0.4
RFC4-202ENST00000392481 UBXN2BQ14CS0 331 aa12.54□□□□□ -0.4
RFC4-202ENST00000392481 ZNF394Q53GI3 561 aa12.54□□□□□ -0.4
RFC4-202ENST00000392481 ARL14EPQ8N8R7 260 aaPredicted RBP12.54□□□□□ -0.4
RFC4-202ENST00000392481 DTWD2Q8NBA8 298 aa12.54□□□□□ -0.4
RFC4-202ENST00000392481 SLC4A11Q8NBS3 891 aa12.54□□□□□ -0.4
RFC4-202ENST00000392481 PDZD8Q8NEN9 1154 aa12.54□□□□□ -0.4
RFC4-202ENST00000392481 ZMIZ2Q8NF64 920 aa12.54□□□□□ -0.4
RFC4-202ENST00000392481 SCAMP5Q8TAC9 235 aa12.54□□□□□ -0.4
RFC4-202ENST00000392481 FAM122AQ96E09 287 aa12.54□□□□□ -0.4
RFC4-202ENST00000392481 MSANTD3Q96H12 275 aa12.54□□□□□ -0.4
RFC4-202ENST00000392481 HEXIM2Q96MH2 286 aaKnown RBP12.54□□□□□ -0.4
RFC4-202ENST00000392481 NT5C1BQ96P26 610 aa12.54□□□□□ -0.4
RFC4-202ENST00000392481 MED15Q96RN5 788 aa12.54□□□□□ -0.4
RFC4-202ENST00000392481 CYP2S1Q96SQ9 504 aa12.54□□□□□ -0.4
RFC4-202ENST00000392481 IRF2BPLQ9H1B7 796 aa12.54□□□□□ -0.4
RFC4-202ENST00000392481 LTB4R2Q9NPC1 389 aa12.54□□□□□ -0.4
RFC4-202ENST00000392481 DLGAP2Q9P1A6 1054 aa12.54□□□□□ -0.4
RFC4-202ENST00000392481 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.54□□□□□ -0.4
RFC4-202ENST00000392481 PIAS3Q9Y6X2 628 aa12.54□□□□□ -0.4
RFC4-202ENST00000392481 MIA3Q5JRA6 1907 aa12.53□□□□□ -0.4
RFC4-202ENST00000392481 KIF26AQ9ULI4 1882 aaPredicted RBP12.53□□□□□ -0.4
RFC4-202ENST00000392481 FAM92AA1XBS5 289 aa12.53□□□□□ -0.4
RFC4-202ENST00000392481 SHISA7A6NL88 538 aa12.53□□□□□ -0.4
RFC4-202ENST00000392481 FAM170BA6NMN3 283 aa12.53□□□□□ -0.4
RFC4-202ENST00000392481 BEST1O76090 585 aa12.53□□□□□ -0.4
RFC4-202ENST00000392481 AFPP02771 609 aaKnown RBP12.53□□□□□ -0.4
RFC4-202ENST00000392481 DCNP07585 359 aaKnown RBP12.53□□□□□ -0.4
RFC4-202ENST00000392481 TCF3P15923 654 aa12.53□□□□□ -0.4
RFC4-202ENST00000392481 KCNH2Q12809 1159 aa12.53□□□□□ -0.4
RFC4-202ENST00000392481 IFRD2Q12894 506 aaPredicted RBP12.53□□□□□ -0.4
RFC4-202ENST00000392481 CC2D1AQ6P1N0 951 aaPredicted RBP12.53□□□□□ -0.4
RFC4-202ENST00000392481 C1orf228Q6PIY5 440 aa12.53□□□□□ -0.4
RFC4-202ENST00000392481 CLEC20AQ6ZU45 233 aa12.53□□□□□ -0.4
RFC4-202ENST00000392481 LMO3Q8TAP4 145 aa12.53□□□□□ -0.4
RFC4-202ENST00000392481 FBXO32Q969P5 355 aa12.53□□□□□ -0.4
RFC4-202ENST00000392481 TMEM176AQ96HP8 235 aa12.53□□□□□ -0.4
RFC4-202ENST00000392481 ZFYVE19Q96K21 471 aa12.53□□□□□ -0.4
RFC4-202ENST00000392481 FAM83CQ9BQN1 747 aa12.53□□□□□ -0.4
RFC4-202ENST00000392481 DUSP16Q9BY84 665 aa12.53□□□□□ -0.4
RFC4-202ENST00000392481 FBXO44Q9H4M3 255 aa12.53□□□□□ -0.4
RFC4-202ENST00000392481 C8orf33Q9H7E9 229 aaPredicted RBP12.53□□□□□ -0.4
RFC4-202ENST00000392481 PNPLA8Q9NP80 782 aa12.53□□□□□ -0.4
RFC4-202ENST00000392481 GKN1Q9NS71 199 aa12.53□□□□□ -0.4
RFC4-202ENST00000392481 ARHGAP26Q9UNA1 814 aa12.53□□□□□ -0.4
RFC4-202ENST00000392481 RIF1Q5UIP0 2472 aaKnown RBP12.52□□□□□ -0.41
RFC4-202ENST00000392481 COL4A3Q01955 1670 aa12.52□□□□□ -0.41
RFC4-202ENST00000392481 NCAM2O15394 837 aa12.52□□□□□ -0.41
RFC4-202ENST00000392481 OLFM2O95897 454 aa12.52□□□□□ -0.41
RFC4-202ENST00000392481 ABL1P00519 1130 aa12.52□□□□□ -0.41
RFC4-202ENST00000392481 OAS1P00973 400 aaKnown RBP12.52□□□□□ -0.41
RFC4-202ENST00000392481 TARSP26639 723 aaKnown RBP12.52□□□□□ -0.41
RFC4-202ENST00000392481 ERCC5P28715 1186 aaPredicted RBP12.52□□□□□ -0.41
RFC4-202ENST00000392481 MAGEA9P43362 315 aa12.52□□□□□ -0.41
RFC4-202ENST00000392481 KPNA1P52294 538 aaPredicted RBP12.52□□□□□ -0.41
RFC4-202ENST00000392481 SLC7A9P82251 487 aa12.52□□□□□ -0.41
RFC4-202ENST00000392481 NHLH1Q02575 133 aa12.52□□□□□ -0.41
RFC4-202ENST00000392481 LRMPQ12912 555 aa12.52□□□□□ -0.41
RFC4-202ENST00000392481 ZNF77Q15935 545 aa12.52□□□□□ -0.41
RFC4-202ENST00000392481 ITPRIPL2Q3MIP1 535 aa12.52□□□□□ -0.41
RFC4-202ENST00000392481 DPCR1Q3MIW9 517 aa12.52□□□□□ -0.41
RFC4-202ENST00000392481 PPP1R26Q5T8A7 1209 aaPredicted RBP12.52□□□□□ -0.41
RFC4-202ENST00000392481 SNX30Q5VWJ9 437 aa12.52□□□□□ -0.41
RFC4-202ENST00000392481 IRF2BP1Q8IU81 584 aa12.52□□□□□ -0.41
RFC4-202ENST00000392481 FAM3CQ92520 227 aa12.52□□□□□ -0.41
RFC4-202ENST00000392481 CLDN23Q96B33 292 aa12.52□□□□□ -0.41
RFC4-202ENST00000392481 GTSE1Q9NYZ3 720 aa12.52□□□□□ -0.41
RFC4-202ENST00000392481 DACH1Q9UI36 760 aa12.52□□□□□ -0.41
RFC4-202ENST00000392481 MTF2Q9Y483 593 aaPredicted RBP12.52□□□□□ -0.41
RFC4-202ENST00000392481 VPS13AQ96RL7 3174 aa12.51□□□□□ -0.41
RFC4-202ENST00000392481 HHLA1C9JL84 531 aa12.51□□□□□ -0.41
RFC4-202ENST00000392481 ZDHHC11BP0C7U3 371 aa12.51□□□□□ -0.41
RFC4-202ENST00000392481 RPS9P46781 194 aaKnown RBP12.51□□□□□ -0.41
RFC4-202ENST00000392481 TUBP50607 506 aa12.51□□□□□ -0.41
RFC4-202ENST00000392481 TNK2Q07912 1038 aa12.51□□□□□ -0.41
RFC4-202ENST00000392481 USP4Q13107 963 aa12.51□□□□□ -0.41
RFC4-202ENST00000392481 MTF1Q14872 753 aa12.51□□□□□ -0.41
RFC4-202ENST00000392481 PDGFRLQ15198 375 aa12.51□□□□□ -0.41
RFC4-202ENST00000392481 CT47A1Q5JQC4 288 aaPredicted RBP12.51□□□□□ -0.41
RFC4-202ENST00000392481 HECTD3Q5T447 861 aa12.51□□□□□ -0.41
RFC4-202ENST00000392481 ARHGAP17Q68EM7 881 aa12.51□□□□□ -0.41
RFC4-202ENST00000392481 RALGPS2Q86X27 583 aaPredicted RBP12.51□□□□□ -0.41
RFC4-202ENST00000392481 ZNF687Q8N1G0 1237 aa12.51□□□□□ -0.41
RFC4-202ENST00000392481 PPM1KQ8N3J5 372 aa12.51□□□□□ -0.41
RFC4-202ENST00000392481 UBR7Q8N806 425 aa12.51□□□□□ -0.41
RFC4-202ENST00000392481 KIAA1958Q8N8K9 716 aa12.51□□□□□ -0.41
RFC4-202ENST00000392481 EHBP1Q8NDI1 1231 aa12.51□□□□□ -0.41
RFC4-202ENST00000392481 RIN3Q8TB24 985 aa12.51□□□□□ -0.41
RFC4-202ENST00000392481 GPT2Q8TD30 523 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms