RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 HIC2Q96JB3 615 aa19.9■□□□□ 0.78
CCDC50-202ENST00000392456 GBP5Q96PP8 586 aa19.9■□□□□ 0.78
CCDC50-202ENST00000392456 NR1H4Q96RI1 486 aaPredicted RBP19.9■□□□□ 0.78
CCDC50-202ENST00000392456 ASB7Q9H672 318 aa19.9■□□□□ 0.78
CCDC50-202ENST00000392456 AGO3Q9H9G7 860 aaKnown RBP19.9■□□□□ 0.78
CCDC50-202ENST00000392456 A0A0J9YVX5 310 aa19.9■□□□□ 0.78
CCDC50-202ENST00000392456 ABCB4P21439 1286 aa19.9■□□□□ 0.78
CCDC50-202ENST00000392456 NFX1Q12986 1120 aaKnown RBP19.9■□□□□ 0.78
CCDC50-202ENST00000392456 DCAF4L1Q3SXM0 396 aa19.9■□□□□ 0.78
CCDC50-202ENST00000392456 ERMARDQ5T6L9 678 aa19.9■□□□□ 0.78
CCDC50-202ENST00000392456 TMEM53Q6P2H8 277 aa19.9■□□□□ 0.78
CCDC50-202ENST00000392456 ENOSF1Q7L5Y1 443 aa19.9■□□□□ 0.78
CCDC50-202ENST00000392456 ZNF317Q96PQ6 595 aaPredicted RBP19.9■□□□□ 0.78
CCDC50-202ENST00000392456 SENP6Q9GZR1 1112 aaPredicted RBP19.9■□□□□ 0.78
CCDC50-202ENST00000392456 NXF1Q9UBU9 619 aaKnown RBP19.9■□□□□ 0.78
CCDC50-202ENST00000392456 CHORDC1Q9UHD1 332 aaPredicted RBP19.9■□□□□ 0.78
CCDC50-202ENST00000392456 CITO14578 2027 aa19.89■□□□□ 0.78
CCDC50-202ENST00000392456 RECQL4O94761 1208 aa19.89■□□□□ 0.77
CCDC50-202ENST00000392456 PRLRP16471 622 aa19.89■□□□□ 0.77
CCDC50-202ENST00000392456 CD58P19256 250 aa19.89■□□□□ 0.77
CCDC50-202ENST00000392456 KCNA4P22459 653 aa19.89■□□□□ 0.77
CCDC50-202ENST00000392456 TMEM132DQ14C87 1099 aa19.89■□□□□ 0.77
CCDC50-202ENST00000392456 ZNF699Q32M78 642 aa19.89■□□□□ 0.77
CCDC50-202ENST00000392456 CCNJLQ8IV13 435 aa19.89■□□□□ 0.77
CCDC50-202ENST00000392456 ARRDC4Q8NCT1 418 aa19.89■□□□□ 0.77
CCDC50-202ENST00000392456 KIF12Q96FN5 646 aa19.89■□□□□ 0.77
CCDC50-202ENST00000392456 ABHD8Q96I13 439 aa19.89■□□□□ 0.77
CCDC50-202ENST00000392456 RAB17Q9H0T7 212 aa19.89■□□□□ 0.77
CCDC50-202ENST00000392456 ST3GAL5Q9UNP4 418 aa19.89■□□□□ 0.77
CCDC50-202ENST00000392456 PCDHB4Q9Y5E5 795 aa19.89■□□□□ 0.77
CCDC50-202ENST00000392456 COMMD3-BMI1R4GMX3 469 aa19.89■□□□□ 0.77
CCDC50-202ENST00000392456 MEIS3P2A8K0S8 358 aa19.88■□□□□ 0.77
CCDC50-202ENST00000392456 STIP1P31948 543 aaKnown RBP19.88■□□□□ 0.77
CCDC50-202ENST00000392456 CACNA2D1P54289 1103 aa19.88■□□□□ 0.77
CCDC50-202ENST00000392456 MGAT3Q09327 533 aa19.88■□□□□ 0.77
CCDC50-202ENST00000392456 MAP7D1Q3KQU3 841 aa19.88■□□□□ 0.77
CCDC50-202ENST00000392456 ZNF394Q53GI3 561 aa19.88■□□□□ 0.77
CCDC50-202ENST00000392456 KIF2BQ8N4N8 673 aa19.88■□□□□ 0.77
CCDC50-202ENST00000392456 STKLD1Q8NE28 680 aa19.88■□□□□ 0.77
CCDC50-202ENST00000392456 C18orf25Q96B23 403 aaPredicted RBP19.88■□□□□ 0.77
CCDC50-202ENST00000392456 XPO6Q96QU8 1125 aaKnown RBP19.88■□□□□ 0.77
CCDC50-202ENST00000392456 SPATA16Q9BXB7 569 aa19.88■□□□□ 0.77
CCDC50-202ENST00000392456 FAM129AQ9BZQ8 928 aa19.88■□□□□ 0.77
CCDC50-202ENST00000392456 IMPG2Q9BZV3 1241 aa19.88■□□□□ 0.77
CCDC50-202ENST00000392456 GOLPH3Q9H4A6 298 aa19.88■□□□□ 0.77
CCDC50-202ENST00000392456 SPO11Q9Y5K1 396 aa19.88■□□□□ 0.77
CCDC50-202ENST00000392456 TRPV2Q9Y5S1 764 aa19.88■□□□□ 0.77
CCDC50-202ENST00000392456 ANXA13P27216 316 aa19.88■□□□□ 0.77
CCDC50-202ENST00000392456 HSPA9P38646 679 aaKnown RBP19.88■□□□□ 0.77
CCDC50-202ENST00000392456 ASPAP45381 313 aa19.88■□□□□ 0.77
CCDC50-202ENST00000392456 RAP1GAPP47736 663 aa19.88■□□□□ 0.77
CCDC50-202ENST00000392456 CDH8P55286 799 aa19.88■□□□□ 0.77
CCDC50-202ENST00000392456 WDR72Q3MJ13 1102 aa19.88■□□□□ 0.77
CCDC50-202ENST00000392456 AGBL2Q5U5Z8 902 aa19.88■□□□□ 0.77
CCDC50-202ENST00000392456 C8orf74Q6P047 294 aa19.88■□□□□ 0.77
CCDC50-202ENST00000392456 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP19.88■□□□□ 0.77
CCDC50-202ENST00000392456 SMG8Q8ND04 991 aaKnown RBP19.88■□□□□ 0.77
CCDC50-202ENST00000392456 CENPTQ96BT3 561 aa19.88■□□□□ 0.77
CCDC50-202ENST00000392456 TRPV6Q9H1D0 765 aa19.88■□□□□ 0.77
CCDC50-202ENST00000392456 TUBA8Q9NY65 449 aaPredicted RBP19.88■□□□□ 0.77
CCDC50-202ENST00000392456 R3HDM2Q9Y2K5 976 aaKnown RBP19.88■□□□□ 0.77
CCDC50-202ENST00000392456 PPEF2O14830 753 aa19.87■□□□□ 0.77
CCDC50-202ENST00000392456 ASLP04424 464 aa19.87■□□□□ 0.77
CCDC50-202ENST00000392456 H2AFZP0C0S5 128 aa19.87■□□□□ 0.77
CCDC50-202ENST00000392456 TPBGLP0DKB5 382 aa19.87■□□□□ 0.77
CCDC50-202ENST00000392456 POLR2BP30876 1174 aaKnown RBP19.87■□□□□ 0.77
CCDC50-202ENST00000392456 PCBP1Q15365 356 aaKnown RBP eCLIP19.87■□□□□ 0.77
CCDC50-202ENST00000392456 THOC7Q6I9Y2 204 aaKnown RBP19.87■□□□□ 0.77
CCDC50-202ENST00000392456 ALKAL1Q6UXT8 129 aa19.87■□□□□ 0.77
CCDC50-202ENST00000392456 H2AFVQ71UI9 128 aa19.87■□□□□ 0.77
CCDC50-202ENST00000392456 ASRGL1Q7L266 308 aa19.87■□□□□ 0.77
CCDC50-202ENST00000392456 UBR7Q8N806 425 aa19.87■□□□□ 0.77
CCDC50-202ENST00000392456 ARHGEF26Q96DR7 871 aa19.87■□□□□ 0.77
CCDC50-202ENST00000392456 TRIM11Q96F44 468 aa19.87■□□□□ 0.77
CCDC50-202ENST00000392456 SNX27Q96L92 541 aa19.87■□□□□ 0.77
CCDC50-202ENST00000392456 THAP2Q9H0W7 228 aa19.87■□□□□ 0.77
CCDC50-202ENST00000392456 UNC93B1Q9H1C4 597 aa19.87■□□□□ 0.77
CCDC50-202ENST00000392456 ETNK2Q9NVF9 386 aa19.87■□□□□ 0.77
CCDC50-202ENST00000392456 CTTNBP2NLQ9P2B4 639 aa19.87■□□□□ 0.77
CCDC50-202ENST00000392456 HTR3EA5X5Y0 456 aa19.87■□□□□ 0.77
CCDC50-202ENST00000392456 H0YGN5 161 aa19.87■□□□□ 0.77
CCDC50-202ENST00000392456 ITGA2BP08514 1039 aa19.87■□□□□ 0.77
CCDC50-202ENST00000392456 PDE6CP51160 858 aa19.87■□□□□ 0.77
CCDC50-202ENST00000392456 SH3BGRP55822 239 aaPredicted RBP19.87■□□□□ 0.77
CCDC50-202ENST00000392456 MTFR1Q15390 333 aa19.87■□□□□ 0.77
CCDC50-202ENST00000392456 SLC44A4Q53GD3 710 aa19.87■□□□□ 0.77
CCDC50-202ENST00000392456 NIF3L1Q9GZT8 377 aa19.87■□□□□ 0.77
CCDC50-202ENST00000392456 CISHQ9NSE2 258 aa19.87■□□□□ 0.77
CCDC50-202ENST00000392456 UBAP1Q9NZ09 502 aa19.87■□□□□ 0.77
CCDC50-202ENST00000392456 PDP2Q9P2J9 529 aa19.87■□□□□ 0.77
CCDC50-202ENST00000392456 IPPQ9Y573 584 aa19.87■□□□□ 0.77
CCDC50-202ENST00000392456 NFS1Q9Y697 457 aa19.87■□□□□ 0.77
CCDC50-202ENST00000392456 FTLP02792 175 aaPredicted RBP19.86■□□□□ 0.77
CCDC50-202ENST00000392456 TROVE2P10155 538 aaKnown RBP eCLIP19.86■□□□□ 0.77
CCDC50-202ENST00000392456 AXLP30530 894 aa19.86■□□□□ 0.77
CCDC50-202ENST00000392456 CCNFP41002 786 aa19.86■□□□□ 0.77
CCDC50-202ENST00000392456 CLCN2P51788 898 aa19.86■□□□□ 0.77
CCDC50-202ENST00000392456 COPS2P61201 443 aa19.86■□□□□ 0.77
CCDC50-202ENST00000392456 CDR2Q01850 454 aa19.86■□□□□ 0.77
CCDC50-202ENST00000392456 BNIP1Q12981 228 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms