RNA–Protein interactions for RNA: ENST00000392343.3

CCDC57-203, Transcript of coiled-coil domain containing 57, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC57, Length 2,896 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-203ENST00000392343 ISLR2Q6UXK2 745 aa14.59□□□□□ -0.07
CCDC57-203ENST00000392343 KCTD6Q8NC69 237 aa14.59□□□□□ -0.07
CCDC57-203ENST00000392343 USP6NLQ92738 828 aa14.59□□□□□ -0.07
CCDC57-203ENST00000392343 ALKBH8Q96BT7 664 aaKnown RBP14.59□□□□□ -0.07
CCDC57-203ENST00000392343 RAB6CQ9H0N0 254 aa14.59□□□□□ -0.07
CCDC57-203ENST00000392343 CYP26B1Q9NR63 512 aa14.59□□□□□ -0.07
CCDC57-203ENST00000392343 PCMTD2Q9NV79 361 aa14.59□□□□□ -0.07
CCDC57-203ENST00000392343 RIPK3Q9Y572 518 aa14.59□□□□□ -0.07
CCDC57-203ENST00000392343 SPDYE2BA6NHP3 402 aa14.59□□□□□ -0.07
CCDC57-203ENST00000392343 PRR5-ARHGAP8B1AHC4 643 aa14.59□□□□□ -0.07
CCDC57-203ENST00000392343 K7ERI5 159 aa14.59□□□□□ -0.07
CCDC57-203ENST00000392343 STBD1O95210 358 aa14.59□□□□□ -0.07
CCDC57-203ENST00000392343 CALB1P05937 261 aa14.59□□□□□ -0.07
CCDC57-203ENST00000392343 LYNP07948 512 aa14.59□□□□□ -0.07
CCDC57-203ENST00000392343 SPDYE6P0CI01 402 aa14.59□□□□□ -0.07
CCDC57-203ENST00000392343 KDELR1P24390 212 aa14.59□□□□□ -0.07
CCDC57-203ENST00000392343 CLDN10P78369 228 aa14.59□□□□□ -0.07
CCDC57-203ENST00000392343 ARHGAP8P85298 464 aa14.59□□□□□ -0.07
CCDC57-203ENST00000392343 BAATQ14032 418 aaPredicted RBP14.59□□□□□ -0.07
CCDC57-203ENST00000392343 PIGHQ14442 188 aaPredicted RBP14.59□□□□□ -0.07
CCDC57-203ENST00000392343 ZRSR2Q15696 482 aaKnown RBP14.59□□□□□ -0.07
CCDC57-203ENST00000392343 CHI3L2Q15782 390 aa14.59□□□□□ -0.07
CCDC57-203ENST00000392343 SPDYE2Q495Y8 402 aa14.59□□□□□ -0.07
CCDC57-203ENST00000392343 C1orf146Q5VVC0 180 aa14.59□□□□□ -0.07
CCDC57-203ENST00000392343 EGFL6Q8IUX8 553 aa14.59□□□□□ -0.07
CCDC57-203ENST00000392343 SMC1BQ8NDV3 1235 aa14.59□□□□□ -0.07
CCDC57-203ENST00000392343 HIPK4Q8NE63 616 aa14.59□□□□□ -0.07
CCDC57-203ENST00000392343 EBF4Q9BQW3 602 aa14.59□□□□□ -0.07
CCDC57-203ENST00000392343 MTMR12Q9C0I1 747 aa14.59□□□□□ -0.07
CCDC57-203ENST00000392343 SMYD3Q9H7B4 428 aa14.59□□□□□ -0.07
CCDC57-203ENST00000392343 PPCSQ9HAB8 311 aa14.59□□□□□ -0.07
CCDC57-203ENST00000392343 ZNF212Q9UDV6 495 aa14.59□□□□□ -0.07
CCDC57-203ENST00000392343 SLC7A8Q9UHI5 535 aa14.59□□□□□ -0.07
CCDC57-203ENST00000392343 DOCK5Q9H7D0 1870 aa14.58□□□□□ -0.07
CCDC57-203ENST00000392343 STAM2O75886 525 aa14.58□□□□□ -0.08
CCDC57-203ENST00000392343 KRT3P12035 628 aa14.58□□□□□ -0.08
CCDC57-203ENST00000392343 CD19P15391 556 aa14.58□□□□□ -0.08
CCDC57-203ENST00000392343 RXRBP28702 533 aa14.58□□□□□ -0.08
CCDC57-203ENST00000392343 KRT72Q14CN4 511 aa14.58□□□□□ -0.08
CCDC57-203ENST00000392343 DENND1BQ6P3S1 775 aa14.58□□□□□ -0.08
CCDC57-203ENST00000392343 SH2D5Q6ZV89 423 aa14.58□□□□□ -0.08
CCDC57-203ENST00000392343 ULK2Q8IYT8 1036 aa14.58□□□□□ -0.08
CCDC57-203ENST00000392343 TMEM35BQ8NCS4 154 aa14.58□□□□□ -0.08
CCDC57-203ENST00000392343 GSTCDQ8NEC7 633 aa14.58□□□□□ -0.08
CCDC57-203ENST00000392343 SPATA18Q8TC71 538 aa14.58□□□□□ -0.08
CCDC57-203ENST00000392343 PHACTR1Q9C0D0 580 aa14.58□□□□□ -0.08
CCDC57-203ENST00000392343 CISHQ9NSE2 258 aa14.58□□□□□ -0.08
CCDC57-203ENST00000392343 DDX56Q9NY93 547 aaKnown RBP14.58□□□□□ -0.08
CCDC57-203ENST00000392343 CTDP1Q9Y5B0 961 aaPredicted RBP14.58□□□□□ -0.08
CCDC57-203ENST00000392343 DGAT1O75907 488 aa14.58□□□□□ -0.08
CCDC57-203ENST00000392343 SLC25A11Q02978 314 aaKnown RBP14.58□□□□□ -0.08
CCDC57-203ENST00000392343 CFAP157Q5JU67 520 aa14.58□□□□□ -0.08
CCDC57-203ENST00000392343 LRRC38Q5VT99 294 aa14.58□□□□□ -0.08
CCDC57-203ENST00000392343 DARS2Q6PI48 645 aaKnown RBP14.58□□□□□ -0.08
CCDC57-203ENST00000392343 TMPRSS6Q8IU80 811 aa14.58□□□□□ -0.08
CCDC57-203ENST00000392343 EFCAB3Q8N7B9 438 aa14.58□□□□□ -0.08
CCDC57-203ENST00000392343 POU5F2Q8N7G0 328 aa14.58□□□□□ -0.08
CCDC57-203ENST00000392343 SLC44A1Q8WWI5 657 aa14.58□□□□□ -0.08
CCDC57-203ENST00000392343 PYDC1Q8WXC3 89 aa14.58□□□□□ -0.08
CCDC57-203ENST00000392343 MMP19Q99542 508 aa14.58□□□□□ -0.08
CCDC57-203ENST00000392343 CNTN3Q9P232 1028 aa14.58□□□□□ -0.08
CCDC57-203ENST00000392343 CYTH4Q9UIA0 394 aa14.58□□□□□ -0.08
CCDC57-203ENST00000392343 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.57□□□□□ -0.08
CCDC57-203ENST00000392343 E7ESA3 106 aa14.57□□□□□ -0.08
CCDC57-203ENST00000392343 DLGAP5Q15398 846 aa14.57□□□□□ -0.08
CCDC57-203ENST00000392343 PTPN20Q4JDL3 420 aa14.57□□□□□ -0.08
CCDC57-203ENST00000392343 SH3PXD2AQ5TCZ1 1133 aa14.57□□□□□ -0.08
CCDC57-203ENST00000392343 ARMC3Q5W041 872 aa14.57□□□□□ -0.08
CCDC57-203ENST00000392343 C1orf228Q6PIY5 440 aa14.57□□□□□ -0.08
CCDC57-203ENST00000392343 DPH6Q7L8W6 267 aa14.57□□□□□ -0.08
CCDC57-203ENST00000392343 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.57□□□□□ -0.08
CCDC57-203ENST00000392343 FAM151AQ8WW52 585 aa14.57□□□□□ -0.08
CCDC57-203ENST00000392343 TCHPQ9BT92 498 aa14.57□□□□□ -0.08
CCDC57-203ENST00000392343 IMPG2Q9BZV3 1241 aa14.57□□□□□ -0.08
CCDC57-203ENST00000392343 KLHL33A6NCF5 533 aa14.57□□□□□ -0.08
CCDC57-203ENST00000392343 ARHGAP42A6NI28 874 aa14.57□□□□□ -0.08
CCDC57-203ENST00000392343 I3L4J1 428 aa14.57□□□□□ -0.08
CCDC57-203ENST00000392343 RTN3O95197 1032 aaPredicted RBP14.57□□□□□ -0.08
CCDC57-203ENST00000392343 TGDSO95455 350 aa14.57□□□□□ -0.08
CCDC57-203ENST00000392343 TBXAS1P24557 533 aaPredicted RBP14.57□□□□□ -0.08
CCDC57-203ENST00000392343 GSTT1P30711 240 aa14.57□□□□□ -0.08
CCDC57-203ENST00000392343 RAP1GAPP47736 663 aa14.57□□□□□ -0.08
CCDC57-203ENST00000392343 SLC25A3Q00325 362 aa14.57□□□□□ -0.08
CCDC57-203ENST00000392343 MTHFD1LQ6UB35 978 aa14.57□□□□□ -0.08
CCDC57-203ENST00000392343 RAPH1Q70E73 1250 aa14.57□□□□□ -0.08
CCDC57-203ENST00000392343 CHSY1Q86X52 802 aa14.57□□□□□ -0.08
CCDC57-203ENST00000392343 CCDC33Q8N5R6 958 aa14.57□□□□□ -0.08
CCDC57-203ENST00000392343 MCPH1Q8NEM0 835 aa14.57□□□□□ -0.08
CCDC57-203ENST00000392343 DEPTORQ8TB45 409 aa14.57□□□□□ -0.08
CCDC57-203ENST00000392343 E2F7Q96AV8 911 aa14.57□□□□□ -0.08
CCDC57-203ENST00000392343 FAF2Q96CS3 445 aa14.57□□□□□ -0.08
CCDC57-203ENST00000392343 ZNF668Q96K58 619 aaPredicted RBP14.57□□□□□ -0.08
CCDC57-203ENST00000392343 PDLIM7Q9NR12 457 aa14.57□□□□□ -0.08
CCDC57-203ENST00000392343 NXF1Q9UBU9 619 aaKnown RBP14.57□□□□□ -0.08
CCDC57-203ENST00000392343 SYNPO2Q9UMS6 1093 aa14.57□□□□□ -0.08
CCDC57-203ENST00000392343 A0A0B4J269 797 aa14.56□□□□□ -0.08
CCDC57-203ENST00000392343 CAPN14A8MX76 684 aa14.56□□□□□ -0.08
CCDC57-203ENST00000392343 OSTNP61366 133 aa14.56□□□□□ -0.08
CCDC57-203ENST00000392343 MRPS5P82675 430 aaKnown RBP14.56□□□□□ -0.08
CCDC57-203ENST00000392343 SLC18A2Q05940 514 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms