RNA–Protein interactions for RNA: ENST00000392249.6

STRADB-202, Transcript of STE20-related kinase adaptor beta, humanhuman

TSL 1 (best) BASIC

Gene STRADB, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRADB-202ENST00000392249 CXCL17Q6UXB2 119 aa19.41■□□□□ 0.7
STRADB-202ENST00000392249 ARHGAP39Q9C0H5 1083 aa19.41■□□□□ 0.7
STRADB-202ENST00000392249 NGRNQ9NPE2 291 aaKnown RBP19.41■□□□□ 0.7
STRADB-202ENST00000392249 GDAP2Q9NXN4 497 aa19.41■□□□□ 0.7
STRADB-202ENST00000392249 TPX2Q9ULW0 747 aaKnown RBP19.41■□□□□ 0.7
STRADB-202ENST00000392249 E7EVH7 732 aa19.4■□□□□ 0.7
STRADB-202ENST00000392249 PGK1P00558 417 aa19.4■□□□□ 0.7
STRADB-202ENST00000392249 PECAM1P16284 738 aaPredicted RBP19.4■□□□□ 0.7
STRADB-202ENST00000392249 PNPLA4P41247 253 aa19.4■□□□□ 0.7
STRADB-202ENST00000392249 SCYL2Q6P3W7 929 aa19.4■□□□□ 0.7
STRADB-202ENST00000392249 APPL2Q8NEU8 664 aa19.4■□□□□ 0.7
STRADB-202ENST00000392249 KHSRPQ92945 711 aaKnown RBP eCLIP19.4■□□□□ 0.72e-7■■■□□ 17.4
STRADB-202ENST00000392249 ZFP42Q96MM3 310 aa19.4■□□□□ 0.7
STRADB-202ENST00000392249 SELENOSQ9BQE4 189 aa19.4■□□□□ 0.7
STRADB-202ENST00000392249 ROPN1BQ9BZX4 212 aaPredicted RBP19.4■□□□□ 0.7
STRADB-202ENST00000392249 SNX25Q9H3E2 840 aa19.4■□□□□ 0.7
STRADB-202ENST00000392249 ROPN1Q9HAT0 212 aaPredicted RBP19.4■□□□□ 0.7
STRADB-202ENST00000392249 FAM155AB1AL88 458 aaPredicted RBP19.4■□□□□ 0.7
STRADB-202ENST00000392249 APOC4-APOC2K7ER74 178 aa19.4■□□□□ 0.7
STRADB-202ENST00000392249 APOC2P02655 101 aa19.4■□□□□ 0.7
STRADB-202ENST00000392249 CCDC38Q502W7 563 aa19.4■□□□□ 0.7
STRADB-202ENST00000392249 CLEC4CQ8WTT0 213 aa19.4■□□□□ 0.7
STRADB-202ENST00000392249 FAM172AQ8WUF8 416 aa19.4■□□□□ 0.7
STRADB-202ENST00000392249 ZIC5Q96T25 663 aa19.4■□□□□ 0.7
STRADB-202ENST00000392249 CNOT10Q9H9A5 744 aaKnown RBP19.4■□□□□ 0.7
STRADB-202ENST00000392249 RSAD1Q9HA92 442 aa19.4■□□□□ 0.7
STRADB-202ENST00000392249 CDY2AQ9Y6F7 541 aa19.4■□□□□ 0.7
STRADB-202ENST00000392249 SDC4P31431 198 aa19.39■□□□□ 0.69
STRADB-202ENST00000392249 MRPS6P82932 125 aaKnown RBP19.39■□□□□ 0.69
STRADB-202ENST00000392249 BST2Q10589 180 aaKnown RBP19.39■□□□□ 0.69
STRADB-202ENST00000392249 NBPF20Q3BBV1 942 aa19.39■□□□□ 0.69
STRADB-202ENST00000392249 SV2CQ496J9 727 aa19.39■□□□□ 0.69
STRADB-202ENST00000392249 MFSD5Q6N075 450 aa19.39■□□□□ 0.69
STRADB-202ENST00000392249 CRYBG2Q8N1P7 616 aa19.39■□□□□ 0.69
STRADB-202ENST00000392249 MTG1Q9BT17 334 aaPredicted RBP19.39■□□□□ 0.69
STRADB-202ENST00000392249 FRMD8P1Q9BZ68 369 aaPredicted RBP19.39■□□□□ 0.69
STRADB-202ENST00000392249 BRCA2P51587 3418 aa19.39■□□□□ 0.69
STRADB-202ENST00000392249 SCN10AQ9Y5Y9 1956 aa19.39■□□□□ 0.69
STRADB-202ENST00000392249 MEIS3P2A8K0S8 358 aa19.39■□□□□ 0.69
STRADB-202ENST00000392249 M0QZ92 97 aa19.39■□□□□ 0.69
STRADB-202ENST00000392249 PTGESO14684 152 aa19.39■□□□□ 0.69
STRADB-202ENST00000392249 HUS1O60921 280 aa19.39■□□□□ 0.69
STRADB-202ENST00000392249 CTSHP09668 335 aa19.39■□□□□ 0.69
STRADB-202ENST00000392249 CYBAP13498 195 aa19.39■□□□□ 0.69
STRADB-202ENST00000392249 MAGEA4P43358 317 aa19.39■□□□□ 0.69
STRADB-202ENST00000392249 MMP13P45452 471 aa19.39■□□□□ 0.69
STRADB-202ENST00000392249 BCAT1P54687 386 aa19.39■□□□□ 0.69
STRADB-202ENST00000392249 LILRA4P59901 499 aa19.39■□□□□ 0.69
STRADB-202ENST00000392249 DPYSL3Q14195 570 aa19.39■□□□□ 0.69
STRADB-202ENST00000392249 MORF4L2Q15014 288 aa19.39■□□□□ 0.69
STRADB-202ENST00000392249 TNFAIP8L3Q5GJ75 292 aa19.39■□□□□ 0.69
STRADB-202ENST00000392249 RNASEH2BQ5TBB1 312 aaKnown RBP19.39■□□□□ 0.69
STRADB-202ENST00000392249 CYP4F22Q6NT55 531 aa19.39■□□□□ 0.69
STRADB-202ENST00000392249 NLRP14Q86W24 1093 aa19.39■□□□□ 0.69
STRADB-202ENST00000392249 RELL1Q8IUW5 271 aa19.39■□□□□ 0.69
STRADB-202ENST00000392249 ADGRF2Q8IZF7 708 aa19.39■□□□□ 0.69
STRADB-202ENST00000392249 ANKRD52Q8NB46 1076 aa19.39■□□□□ 0.69
STRADB-202ENST00000392249 SLC2A14Q8TDB8 520 aa19.39■□□□□ 0.69
STRADB-202ENST00000392249 STK32AQ8WU08 396 aa19.39■□□□□ 0.69
STRADB-202ENST00000392249 TRIB2Q92519 343 aa19.39■□□□□ 0.69
STRADB-202ENST00000392249 MAK16Q9BXY0 300 aaKnown RBP19.39■□□□□ 0.69
STRADB-202ENST00000392249 FAM107BQ9H098 131 aa19.39■□□□□ 0.69
STRADB-202ENST00000392249 STMN4Q9H169 189 aaPredicted RBP19.39■□□□□ 0.69
STRADB-202ENST00000392249 SAYSD1Q9NPB0 183 aa19.39■□□□□ 0.69
STRADB-202ENST00000392249 GPATCH2LQ9NWQ4 482 aa19.39■□□□□ 0.69
STRADB-202ENST00000392249 CTNNAL1Q9UBT7 734 aa19.39■□□□□ 0.69
STRADB-202ENST00000392249 GTF2IRD1Q9UHL9 959 aa19.39■□□□□ 0.69
STRADB-202ENST00000392249 DPYSL4O14531 572 aa19.38■□□□□ 0.69
STRADB-202ENST00000392249 ENDOD1O94919 500 aa19.38■□□□□ 0.69
STRADB-202ENST00000392249 CDR1P51861 262 aa19.38■□□□□ 0.69
STRADB-202ENST00000392249 EIF3EP60228 445 aaKnown RBP19.38■□□□□ 0.69
STRADB-202ENST00000392249 SREBF2Q12772 1141 aa19.38■□□□□ 0.69
STRADB-202ENST00000392249 FAM47CQ5HY64 1035 aa19.38■□□□□ 0.69
STRADB-202ENST00000392249 GDF6Q6KF10 455 aaPredicted RBP19.38■□□□□ 0.69
STRADB-202ENST00000392249 NPNTQ6UXI9 565 aa19.38■□□□□ 0.69
STRADB-202ENST00000392249 MYCBPAPQ8TBZ2 947 aa19.38■□□□□ 0.69
STRADB-202ENST00000392249 RSAD2Q8WXG1 361 aa19.38■□□□□ 0.69
STRADB-202ENST00000392249 WNT8BQ93098 351 aa19.38■□□□□ 0.69
STRADB-202ENST00000392249 TSPAN18Q96SJ8 248 aa19.38■□□□□ 0.69
STRADB-202ENST00000392249 FOXP3Q9BZS1 431 aa19.38■□□□□ 0.69
STRADB-202ENST00000392249 GABRQQ9UN88 632 aa19.38■□□□□ 0.69
STRADB-202ENST00000392249 MCF2LO15068 1137 aa19.37■□□□□ 0.69
STRADB-202ENST00000392249 LCP1P13796 627 aa19.37■□□□□ 0.69
STRADB-202ENST00000392249 TFE3P19532 575 aaPredicted RBP19.37■□□□□ 0.69
STRADB-202ENST00000392249 SNX16P57768 344 aa19.37■□□□□ 0.69
STRADB-202ENST00000392249 GJA9P57773 515 aa19.37■□□□□ 0.69
STRADB-202ENST00000392249 KRT81Q14533 505 aa19.37■□□□□ 0.69
STRADB-202ENST00000392249 CCDC142Q17RM4 750 aa19.37■□□□□ 0.69
STRADB-202ENST00000392249 ZC3H12AQ5D1E8 599 aaKnown RBP19.37■□□□□ 0.69
STRADB-202ENST00000392249 HP1BP3Q5SSJ5 553 aaPredicted RBP19.37■□□□□ 0.69
STRADB-202ENST00000392249 B4GALNT4Q76KP1 1039 aa19.37■□□□□ 0.69
STRADB-202ENST00000392249 UNC45BQ8IWX7 931 aa19.37■□□□□ 0.69
STRADB-202ENST00000392249 TAB3Q8N5C8 712 aaPredicted RBP19.37■□□□□ 0.69
STRADB-202ENST00000392249 SPATA18Q8TC71 538 aa19.37■□□□□ 0.69
STRADB-202ENST00000392249 SERPINB12Q96P63 405 aa19.37■□□□□ 0.69
STRADB-202ENST00000392249 CCT8L2Q96SF2 557 aa19.37■□□□□ 0.69
STRADB-202ENST00000392249 CACNG4Q9UBN1 327 aa19.37■□□□□ 0.69
STRADB-202ENST00000392249 DCAF8L1A6NGE4 600 aa19.37■□□□□ 0.69
STRADB-202ENST00000392249 GOLGA8MH3BSY2 632 aa19.37■□□□□ 0.69
STRADB-202ENST00000392249 RBP3P10745 1247 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms