RNA–Protein interactions for RNA: ENST00000392185.7

SNX9-201, Transcript of sorting nexin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX9, Length 4,198 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9-201ENST00000392185 FAM153BP0C7A2 387 aa17.19■□□□□ 0.34
SNX9-201ENST00000392185 ATXN8OSP0DMR3 200 aa17.19■□□□□ 0.34
SNX9-201ENST00000392185 STIP1P31948 543 aaKnown RBP17.19■□□□□ 0.34
SNX9-201ENST00000392185 FAM153CQ494X1 144 aa17.19■□□□□ 0.34
SNX9-201ENST00000392185 RASSF3Q86WH2 238 aa17.19■□□□□ 0.34
SNX9-201ENST00000392185 EFHBQ8N7U6 833 aa17.19■□□□□ 0.34
SNX9-201ENST00000392185 GANCQ8TET4 914 aa17.19■□□□□ 0.34
SNX9-201ENST00000392185 ALKBH8Q96BT7 664 aaKnown RBP17.19■□□□□ 0.34
SNX9-201ENST00000392185 VCPIP1Q96JH7 1222 aa17.19■□□□□ 0.34
SNX9-201ENST00000392185 PABPC3Q9H361 631 aaKnown RBP17.19■□□□□ 0.34
SNX9-201ENST00000392185 SEMA4AQ9H3S1 761 aa17.19■□□□□ 0.34
SNX9-201ENST00000392185 FAM153AQ9UHL3 310 aa17.19■□□□□ 0.34
SNX9-201ENST00000392185 SETSIPP0DME0 302 aa17.18■□□□□ 0.34
SNX9-201ENST00000392185 CCL23P55773 120 aa17.18■□□□□ 0.34
SNX9-201ENST00000392185 YWHAZP63104 245 aaKnown RBP17.18■□□□□ 0.34
SNX9-201ENST00000392185 FOXR2Q6PJQ5 311 aa17.18■□□□□ 0.34
SNX9-201ENST00000392185 NLRP14Q86W24 1093 aa17.18■□□□□ 0.34
SNX9-201ENST00000392185 PCDHB18PQ96TA0 734 aa17.18■□□□□ 0.34
SNX9-201ENST00000392185 AVENQ9NQS1 362 aaPredicted RBP17.18■□□□□ 0.34
SNX9-201ENST00000392185 COL16A1Q07092 1604 aaPredicted RBP17.18■□□□□ 0.34
SNX9-201ENST00000392185 CHN1P15882 459 aa17.18■□□□□ 0.34
SNX9-201ENST00000392185 ARL2P36404 184 aa17.18■□□□□ 0.34
SNX9-201ENST00000392185 CRLF3Q8IUI8 442 aa17.18■□□□□ 0.34
SNX9-201ENST00000392185 NUDCD3Q8IVD9 361 aa17.18■□□□□ 0.34
SNX9-201ENST00000392185 DDX27Q96GQ7 796 aaKnown RBP17.18■□□□□ 0.34
SNX9-201ENST00000392185 ZFP42Q96MM3 310 aa17.18■□□□□ 0.34
SNX9-201ENST00000392185 NIFKQ9BYG3 293 aaKnown RBP17.18■□□□□ 0.34
SNX9-201ENST00000392185 TRIM55Q9BYV6 548 aa17.18■□□□□ 0.34
SNX9-201ENST00000392185 STRCP1A6NGW2 1772 aa17.18■□□□□ 0.34
SNX9-201ENST00000392185 FRMD3A2A2Y4 597 aa17.18■□□□□ 0.34
SNX9-201ENST00000392185 ZBTB48P10074 688 aaPredicted RBP17.18■□□□□ 0.34
SNX9-201ENST00000392185 ADSSP30520 456 aa17.18■□□□□ 0.34
SNX9-201ENST00000392185 PAPOLAP51003 745 aaKnown RBP17.18■□□□□ 0.34
SNX9-201ENST00000392185 ATG16L1Q676U5 607 aa17.18■□□□□ 0.34
SNX9-201ENST00000392185 PPIL6Q8IXY8 311 aa17.18■□□□□ 0.34
SNX9-201ENST00000392185 ZNF669Q96BR6 464 aaPredicted RBP17.18■□□□□ 0.34
SNX9-201ENST00000392185 TCP11X1B4DZS4 312 aa17.18■□□□□ 0.34
SNX9-201ENST00000392185 NEMP1O14524 444 aa17.18■□□□□ 0.34
SNX9-201ENST00000392185 HMGCRP04035 888 aa17.18■□□□□ 0.34
SNX9-201ENST00000392185 MCL1Q07820 350 aa17.18■□□□□ 0.34
SNX9-201ENST00000392185 CCL14Q16627 93 aa17.18■□□□□ 0.34
SNX9-201ENST00000392185 SH3D19Q5HYK7 790 aa17.18■□□□□ 0.34
SNX9-201ENST00000392185 DENND5BQ6ZUT9 1274 aa17.18■□□□□ 0.34
SNX9-201ENST00000392185 C3orf20Q8ND61 904 aa17.18■□□□□ 0.34
SNX9-201ENST00000392185 EPS8L3Q8TE67 593 aaKnown RBP17.18■□□□□ 0.34
SNX9-201ENST00000392185 TFB1MQ8WVM0 346 aaKnown RBP17.18■□□□□ 0.34
SNX9-201ENST00000392185 ASIC4Q96FT7 647 aa17.18■□□□□ 0.34
SNX9-201ENST00000392185 CELF6Q96J87 481 aaKnown RBP17.18■□□□□ 0.34
SNX9-201ENST00000392185 TAF1P21675 1872 aa17.17■□□□□ 0.34
SNX9-201ENST00000392185 AGTP01019 485 aa17.17■□□□□ 0.34
SNX9-201ENST00000392185 MDH1P40925 334 aaKnown RBP17.17■□□□□ 0.34
SNX9-201ENST00000392185 KPNA2P52292 529 aaKnown RBP17.17■□□□□ 0.34
SNX9-201ENST00000392185 MRPS6P82932 125 aaKnown RBP17.17■□□□□ 0.34
SNX9-201ENST00000392185 NSUN2Q08J23 767 aaKnown RBP eCLIP17.17■□□□□ 0.34
SNX9-201ENST00000392185 CCNG2Q16589 344 aa17.17■□□□□ 0.34
SNX9-201ENST00000392185 KLC3Q6P597 504 aa17.17■□□□□ 0.34
SNX9-201ENST00000392185 TBC1D1Q86TI0 1168 aaPredicted RBP17.17■□□□□ 0.34
SNX9-201ENST00000392185 CHMP6Q96FZ7 201 aa17.17■□□□□ 0.34
SNX9-201ENST00000392185 PRMT1Q99873 361 aaKnown RBP17.17■□□□□ 0.34
SNX9-201ENST00000392185 RAG1P15918 1043 aa17.17■□□□□ 0.34
SNX9-201ENST00000392185 YBX3P16989 372 aaKnown RBP eCLIP17.17■□□□□ 0.341e-6■■□□□ 12.1
SNX9-201ENST00000392185 NFE2Q16621 373 aaPredicted RBP17.17■□□□□ 0.34
SNX9-201ENST00000392185 YME1L1Q96TA2 773 aa17.17■□□□□ 0.34
SNX9-201ENST00000392185 TRIM56Q9BRZ2 755 aaKnown RBP17.17■□□□□ 0.34
SNX9-201ENST00000392185 MAGEB5Q9BZ81 275 aa17.17■□□□□ 0.34
SNX9-201ENST00000392185 ULBP1Q9BZM6 244 aa17.17■□□□□ 0.34
SNX9-201ENST00000392185 UBP1Q9NZI7 540 aa17.17■□□□□ 0.34
SNX9-201ENST00000392185 DNPEPQ9ULA0 475 aa17.17■□□□□ 0.34
SNX9-201ENST00000392185 JCHAINP01591 159 aa17.17■□□□□ 0.34
SNX9-201ENST00000392185 AMPD1P23109 780 aa17.17■□□□□ 0.34
SNX9-201ENST00000392185 MAMLD1Q13495 774 aa17.17■□□□□ 0.34
SNX9-201ENST00000392185 NT5DC4Q86YG4 428 aa17.17■□□□□ 0.34
SNX9-201ENST00000392185 WDR75Q8IWA0 830 aaKnown RBP17.17■□□□□ 0.34
SNX9-201ENST00000392185 CDC42EP4Q9H3Q1 356 aaKnown RBP17.17■□□□□ 0.34
SNX9-201ENST00000392185 TXNDC9O14530 226 aa17.16■□□□□ 0.34
SNX9-201ENST00000392185 S100BP04271 92 aaPredicted RBP17.16■□□□□ 0.34
SNX9-201ENST00000392185 NOMO3P69849 1222 aa17.16■□□□□ 0.34
SNX9-201ENST00000392185 CNGA2Q16280 664 aa17.16■□□□□ 0.34
SNX9-201ENST00000392185 LBHD1Q9BQE6 289 aaPredicted RBP17.16■□□□□ 0.34
SNX9-201ENST00000392185 MUC3BQ9H195 1237 aa17.16■□□□□ 0.34
SNX9-201ENST00000392185 RGS17Q9UGC6 210 aaPredicted RBP17.16■□□□□ 0.34
SNX9-201ENST00000392185 SALL4Q9UJQ4 1053 aa17.16■□□□□ 0.34
SNX9-201ENST00000392185 TMEM120BA0PK00 339 aa17.16■□□□□ 0.34
SNX9-201ENST00000392185 KCNK1O00180 336 aa17.16■□□□□ 0.34
SNX9-201ENST00000392185 USP17L7P0C7H9 530 aa17.16■□□□□ 0.34
SNX9-201ENST00000392185 COPS2P61201 443 aa17.16■□□□□ 0.34
SNX9-201ENST00000392185 ZNF280DQ6N043 979 aa17.16■□□□□ 0.34
SNX9-201ENST00000392185 TRIM67Q6ZTA4 783 aa17.16■□□□□ 0.34
SNX9-201ENST00000392185 SUDS3Q9H7L9 328 aaPredicted RBP17.16■□□□□ 0.34
SNX9-201ENST00000392185 CATSPERBQ9H7T0 1116 aa17.16■□□□□ 0.34
SNX9-201ENST00000392185 PIH1D1Q9NWS0 290 aaKnown RBP17.16■□□□□ 0.34
SNX9-201ENST00000392185 SLC12A8A0AV02 714 aa17.16■□□□□ 0.34
SNX9-201ENST00000392185 TMEM88BA6NKF7 163 aa17.16■□□□□ 0.34
SNX9-201ENST00000392185 ENDOD1O94919 500 aa17.16■□□□□ 0.34
SNX9-201ENST00000392185 SNX17Q15036 470 aa17.16■□□□□ 0.34
SNX9-201ENST00000392185 FASTKD1Q53R41 847 aaKnown RBP17.16■□□□□ 0.34
SNX9-201ENST00000392185 ALG3Q92685 438 aa17.16■□□□□ 0.34
SNX9-201ENST00000392185 ZNF112Q9UJU3 913 aa17.16■□□□□ 0.34
SNX9-201ENST00000392185 CCDC160A6NGH7 325 aa17.15■□□□□ 0.34
SNX9-201ENST00000392185 F9P00740 461 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms