RNA–Protein interactions for RNA: ENST00000390009.7

ACTN4-202, Transcript of actinin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ACTN4, Length 2,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-202ENST00000390009 TOP6BLQ8N6T0 577 aa19.06■□□□□ 0.64
ACTN4-202ENST00000390009 TTC13Q8NBP0 860 aa19.06■□□□□ 0.64
ACTN4-202ENST00000390009 UHMK1Q8TAS1 419 aaKnown RBP19.06■□□□□ 0.64
ACTN4-202ENST00000390009 ACTL9Q8TC94 416 aa19.06■□□□□ 0.64
ACTN4-202ENST00000390009 TMEM121Q9BTD3 319 aa19.06■□□□□ 0.64
ACTN4-202ENST00000390009 DNAI2Q9GZS0 605 aa19.06■□□□□ 0.64
ACTN4-202ENST00000390009 A6NNZ2 444 aa19.06■□□□□ 0.64
ACTN4-202ENST00000390009 CAND2O75155 1236 aa19.06■□□□□ 0.64
ACTN4-202ENST00000390009 ZSCAN5DPP0CG00 497 aa19.06■□□□□ 0.64
ACTN4-202ENST00000390009 CCND3P30281 292 aaPredicted RBP19.06■□□□□ 0.64
ACTN4-202ENST00000390009 MLH1P40692 756 aa19.06■□□□□ 0.64
ACTN4-202ENST00000390009 ARSEP51690 589 aa19.06■□□□□ 0.64
ACTN4-202ENST00000390009 ATP11AP98196 1134 aa19.06■□□□□ 0.64
ACTN4-202ENST00000390009 MGAT3Q09327 533 aa19.06■□□□□ 0.64
ACTN4-202ENST00000390009 ZSCAN26Q16670 478 aa19.06■□□□□ 0.64
ACTN4-202ENST00000390009 TUBB8Q3ZCM7 444 aa19.06■□□□□ 0.64
ACTN4-202ENST00000390009 HIBCHQ6NVY1 386 aaPredicted RBP19.06■□□□□ 0.64
ACTN4-202ENST00000390009 LRRC31Q6UY01 552 aa19.06■□□□□ 0.64
ACTN4-202ENST00000390009 SLC2A14Q8TDB8 520 aa19.06■□□□□ 0.64
ACTN4-202ENST00000390009 TNIP3Q96KP6 325 aa19.06■□□□□ 0.64
ACTN4-202ENST00000390009 CALN1Q9BXU9 219 aa19.06■□□□□ 0.64
ACTN4-202ENST00000390009 CHST12Q9NRB3 414 aa19.06■□□□□ 0.64
ACTN4-202ENST00000390009 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.06■□□□□ 0.64
ACTN4-202ENST00000390009 GRIN2DO15399 1336 aa19.05■□□□□ 0.64
ACTN4-202ENST00000390009 PRPSAP2O60256 369 aa19.05■□□□□ 0.64
ACTN4-202ENST00000390009 ETS1P14921 441 aa19.05■□□□□ 0.64
ACTN4-202ENST00000390009 WARSP23381 471 aaKnown RBP19.05■□□□□ 0.64
ACTN4-202ENST00000390009 SDC4P31431 198 aa19.05■□□□□ 0.64
ACTN4-202ENST00000390009 KCNA10Q16322 511 aa19.05■□□□□ 0.64
ACTN4-202ENST00000390009 RPAINQ86UA6 219 aa19.05■□□□□ 0.64
ACTN4-202ENST00000390009 OSTM1Q86WC4 334 aa19.05■□□□□ 0.64
ACTN4-202ENST00000390009 RFX6Q8HWS3 928 aa19.05■□□□□ 0.64
ACTN4-202ENST00000390009 HACE1Q8IYU2 909 aa19.05■□□□□ 0.64
ACTN4-202ENST00000390009 GSTCDQ8NEC7 633 aa19.05■□□□□ 0.64
ACTN4-202ENST00000390009 DDX23Q9BUQ8 820 aaKnown RBP19.05■□□□□ 0.64
ACTN4-202ENST00000390009 FRMD8P1Q9BZ68 369 aaPredicted RBP19.05■□□□□ 0.64
ACTN4-202ENST00000390009 RSAD1Q9HA92 442 aa19.05■□□□□ 0.64
ACTN4-202ENST00000390009 DNAJC17Q9NVM6 304 aaKnown RBP19.05■□□□□ 0.64
ACTN4-202ENST00000390009 DCDC2CA8MYV0 355 aa19.04■□□□□ 0.64
ACTN4-202ENST00000390009 SGK1O00141 431 aa19.04■□□□□ 0.64
ACTN4-202ENST00000390009 ENDOD1O94919 500 aa19.04■□□□□ 0.64
ACTN4-202ENST00000390009 CDH6P55285 790 aa19.04■□□□□ 0.64
ACTN4-202ENST00000390009 ARFGAP2Q8N6H7 521 aa19.04■□□□□ 0.64
ACTN4-202ENST00000390009 PWWP2AQ96N64 755 aa19.04■□□□□ 0.64
ACTN4-202ENST00000390009 GAD1Q99259 594 aa19.04■□□□□ 0.64
ACTN4-202ENST00000390009 TSPYL2Q9H2G4 693 aaPredicted RBP19.04■□□□□ 0.64
ACTN4-202ENST00000390009 ADAM7Q9H2U9 754 aa19.04■□□□□ 0.64
ACTN4-202ENST00000390009 NGRNQ9NPE2 291 aaKnown RBP19.04■□□□□ 0.64
ACTN4-202ENST00000390009 SLC38A7Q9NVC3 462 aa19.04■□□□□ 0.64
ACTN4-202ENST00000390009 CYB561D2O14569 222 aa19.04■□□□□ 0.64
ACTN4-202ENST00000390009 DNALI1O14645 258 aaPredicted RBP19.04■□□□□ 0.64
ACTN4-202ENST00000390009 EIF3HO15372 352 aaKnown RBP eCLIP19.04■□□□□ 0.64
ACTN4-202ENST00000390009 RPLP2P05387 115 aaKnown RBP19.04■□□□□ 0.64
ACTN4-202ENST00000390009 PRKAR2AP13861 404 aaKnown RBP19.04■□□□□ 0.64
ACTN4-202ENST00000390009 RPL34P49207 117 aaKnown RBP19.04■□□□□ 0.64
ACTN4-202ENST00000390009 MAGOHP61326 146 aaKnown RBP19.04■□□□□ 0.64
ACTN4-202ENST00000390009 B3GALNT2Q8NCR0 500 aa19.04■□□□□ 0.64
ACTN4-202ENST00000390009 CLEC4CQ8WTT0 213 aa19.04■□□□□ 0.64
ACTN4-202ENST00000390009 FAM172AQ8WUF8 416 aa19.04■□□□□ 0.64
ACTN4-202ENST00000390009 LPPQ93052 612 aa19.04■□□□□ 0.64
ACTN4-202ENST00000390009 TMEM109Q9BVC6 243 aa19.04■□□□□ 0.64
ACTN4-202ENST00000390009 AGO3Q9H9G7 860 aaKnown RBP19.04■□□□□ 0.64
ACTN4-202ENST00000390009 CACNG4Q9UBN1 327 aa19.04■□□□□ 0.64
ACTN4-202ENST00000390009 TLDC2A0PJX2 215 aa19.03■□□□□ 0.64
ACTN4-202ENST00000390009 APOC4-APOC2K7ER74 178 aa19.03■□□□□ 0.64
ACTN4-202ENST00000390009 GPR182O15218 404 aa19.03■□□□□ 0.64
ACTN4-202ENST00000390009 ACSL3O95573 720 aa19.03■□□□□ 0.64
ACTN4-202ENST00000390009 APOC2P02655 101 aa19.03■□□□□ 0.64
ACTN4-202ENST00000390009 ELNP15502 786 aa19.03■□□□□ 0.64
ACTN4-202ENST00000390009 IGFBP6P24592 240 aaPredicted RBP19.03■□□□□ 0.64
ACTN4-202ENST00000390009 TKTP29401 623 aaKnown RBP19.03■□□□□ 0.64
ACTN4-202ENST00000390009 THPOP40225 353 aa19.03■□□□□ 0.64
ACTN4-202ENST00000390009 AFF1P51825 1210 aaKnown RBP19.03■□□□□ 0.64
ACTN4-202ENST00000390009 GPS1Q13098 491 aa19.03■□□□□ 0.64
ACTN4-202ENST00000390009 SCYL2Q6P3W7 929 aa19.03■□□□□ 0.64
ACTN4-202ENST00000390009 CROCCP2Q86T23 111 aa19.03■□□□□ 0.64
ACTN4-202ENST00000390009 KLHDC9Q8NEP7 349 aa19.03■□□□□ 0.64
ACTN4-202ENST00000390009 TLCD1Q96CP7 247 aa19.03■□□□□ 0.64
ACTN4-202ENST00000390009 PGM2Q96G03 612 aa19.03■□□□□ 0.64
ACTN4-202ENST00000390009 PCDH9Q9HC56 1237 aa19.03■□□□□ 0.64
ACTN4-202ENST00000390009 CYLDQ9NQC7 956 aa19.03■□□□□ 0.64
ACTN4-202ENST00000390009 SMIM23A6NLE4 172 aa19.03■□□□□ 0.64
ACTN4-202ENST00000390009 TTC4O95801 387 aa19.03■□□□□ 0.64
ACTN4-202ENST00000390009 IFNB1P01574 187 aa19.03■□□□□ 0.64
ACTN4-202ENST00000390009 THP07101 528 aa19.03■□□□□ 0.64
ACTN4-202ENST00000390009 LCP1P13796 627 aa19.03■□□□□ 0.64
ACTN4-202ENST00000390009 DESP17661 470 aa19.03■□□□□ 0.64
ACTN4-202ENST00000390009 GUCY1A3Q02108 690 aa19.03■□□□□ 0.64
ACTN4-202ENST00000390009 MMRN1Q13201 1228 aa19.03■□□□□ 0.64
ACTN4-202ENST00000390009 PTGISQ16647 500 aa19.03■□□□□ 0.64
ACTN4-202ENST00000390009 WSCD1Q658N2 575 aa19.03■□□□□ 0.64
ACTN4-202ENST00000390009 CCSAPQ6IQ19 270 aaPredicted RBP19.03■□□□□ 0.64
ACTN4-202ENST00000390009 SLC26A9Q7LBE3 791 aa19.03■□□□□ 0.64
ACTN4-202ENST00000390009 SMC1BQ8NDV3 1235 aa19.03■□□□□ 0.64
ACTN4-202ENST00000390009 OSBPL7Q9BZF2 842 aa19.03■□□□□ 0.64
ACTN4-202ENST00000390009 ATP2C2O75185 946 aa19.02■□□□□ 0.64
ACTN4-202ENST00000390009 PECAM1P16284 738 aaPredicted RBP19.02■□□□□ 0.64
ACTN4-202ENST00000390009 ACADSBP45954 432 aa19.02■□□□□ 0.64
ACTN4-202ENST00000390009 PPP2R2AP63151 447 aa19.02■□□□□ 0.64
ACTN4-202ENST00000390009 DPYSL3Q14195 570 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms