RNA–Protein interactions for RNA: ENST00000389980.7

SPTBN1-203, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-203ENST00000389980 NIPA2Q8N8Q9 360 aa12.81□□□□□ -0.36
SPTBN1-203ENST00000389980 ZMIZ2Q8NF64 920 aa12.81□□□□□ -0.36
SPTBN1-203ENST00000389980 HERPUD2Q9BSE4 406 aa12.81□□□□□ -0.36
SPTBN1-203ENST00000389980 GPR62Q9BZJ7 368 aa12.81□□□□□ -0.36
SPTBN1-203ENST00000389980 DMGDHQ9UI17 866 aaKnown RBP12.81□□□□□ -0.36
SPTBN1-203ENST00000389980 ADAM28Q9UKQ2 775 aa12.81□□□□□ -0.36
SPTBN1-203ENST00000389980 NLRC5Q86WI3 1866 aa12.81□□□□□ -0.36
SPTBN1-203ENST00000389980 PTPRDP23468 1912 aa12.81□□□□□ -0.36
SPTBN1-203ENST00000389980 TMEM189-UBE2V1I3L0A0 370 aa12.8□□□□□ -0.36
SPTBN1-203ENST00000389980 PSTPIP1O43586 416 aa12.8□□□□□ -0.36
SPTBN1-203ENST00000389980 ZRANB2O95218 330 aaKnown RBP eCLIP12.8□□□□□ -0.36
SPTBN1-203ENST00000389980 TIMP1P01033 207 aa12.8□□□□□ -0.36
SPTBN1-203ENST00000389980 ALDH2P05091 517 aa12.8□□□□□ -0.36
SPTBN1-203ENST00000389980 GPD1P21695 349 aa12.8□□□□□ -0.36
SPTBN1-203ENST00000389980 IL1R2P27930 398 aa12.8□□□□□ -0.36
SPTBN1-203ENST00000389980 RPL34P49207 117 aaKnown RBP12.8□□□□□ -0.36
SPTBN1-203ENST00000389980 SLC8A3P57103 927 aa12.8□□□□□ -0.36
SPTBN1-203ENST00000389980 VSNL1P62760 191 aa12.8□□□□□ -0.36
SPTBN1-203ENST00000389980 ATP11AP98196 1134 aa12.8□□□□□ -0.36
SPTBN1-203ENST00000389980 KCNT1Q5JUK3 1230 aa12.8□□□□□ -0.36
SPTBN1-203ENST00000389980 C8orf74Q6P047 294 aa12.8□□□□□ -0.36
SPTBN1-203ENST00000389980 FAM171BQ6P995 826 aa12.8□□□□□ -0.36
SPTBN1-203ENST00000389980 THEM5Q8N1Q8 247 aa12.8□□□□□ -0.36
SPTBN1-203ENST00000389980 FNIP1Q8TF40 1166 aa12.8□□□□□ -0.36
SPTBN1-203ENST00000389980 RNF25Q96BH1 459 aaPredicted RBP12.8□□□□□ -0.36
SPTBN1-203ENST00000389980 HSFY1Q96LI6 401 aa12.8□□□□□ -0.36
SPTBN1-203ENST00000389980 PKMYT1Q99640 499 aa12.8□□□□□ -0.36
SPTBN1-203ENST00000389980 HEMGNQ9BXL5 484 aa12.8□□□□□ -0.36
SPTBN1-203ENST00000389980 ZWILCHQ9H900 591 aa12.8□□□□□ -0.36
SPTBN1-203ENST00000389980 MARCH5Q9NX47 278 aa12.8□□□□□ -0.36
SPTBN1-203ENST00000389980 PCSK1NQ9UHG2 260 aa12.8□□□□□ -0.36
SPTBN1-203ENST00000389980 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.8□□□□□ -0.36
SPTBN1-203ENST00000389980 TFE3P19532 575 aaPredicted RBP12.8□□□□□ -0.36
SPTBN1-203ENST00000389980 EN2P19622 333 aaPredicted RBP12.8□□□□□ -0.36
SPTBN1-203ENST00000389980 TYMPP19971 482 aa12.8□□□□□ -0.36
SPTBN1-203ENST00000389980 ZNF143P52747 638 aaPredicted RBP12.8□□□□□ -0.36
SPTBN1-203ENST00000389980 FAM171A1Q5VUB5 890 aa12.8□□□□□ -0.36
SPTBN1-203ENST00000389980 SLC13A5Q86YT5 568 aaPredicted RBP12.8□□□□□ -0.36
SPTBN1-203ENST00000389980 BCL7CQ8WUZ0 217 aaPredicted RBP12.8□□□□□ -0.36
SPTBN1-203ENST00000389980 FAN1Q9Y2M0 1017 aa12.8□□□□□ -0.36
SPTBN1-203ENST00000389980 ZSCAN5CA6NGD5 496 aaPredicted RBP12.79□□□□□ -0.36
SPTBN1-203ENST00000389980 HOXA2O43364 376 aa12.79□□□□□ -0.36
SPTBN1-203ENST00000389980 RAD51CO43502 376 aa12.79□□□□□ -0.36
SPTBN1-203ENST00000389980 SASH3O75995 380 aa12.79□□□□□ -0.36
SPTBN1-203ENST00000389980 GALTP07902 379 aa12.79□□□□□ -0.36
SPTBN1-203ENST00000389980 RAG1P15918 1043 aa12.79□□□□□ -0.36
SPTBN1-203ENST00000389980 MIPP30301 263 aa12.79□□□□□ -0.36
SPTBN1-203ENST00000389980 ACADSBP45954 432 aa12.79□□□□□ -0.36
SPTBN1-203ENST00000389980 TUBB4BP68371 445 aa12.79□□□□□ -0.36
SPTBN1-203ENST00000389980 DEFB103AP81534 67 aa12.79□□□□□ -0.36
SPTBN1-203ENST00000389980 TSPY1Q01534 308 aa12.79□□□□□ -0.36
SPTBN1-203ENST00000389980 SLC25A11Q02978 314 aaKnown RBP12.79□□□□□ -0.36
SPTBN1-203ENST00000389980 CCDC14Q49A88 953 aa12.79□□□□□ -0.36
SPTBN1-203ENST00000389980 KATNAL2Q8IYT4 538 aa12.79□□□□□ -0.36
SPTBN1-203ENST00000389980 RAPGEF5Q92565 580 aa12.79□□□□□ -0.36
SPTBN1-203ENST00000389980 ADAM33Q9BZ11 813 aa12.79□□□□□ -0.36
SPTBN1-203ENST00000389980 LRRC4Q9HBW1 653 aa12.79□□□□□ -0.36
SPTBN1-203ENST00000389980 SART1O43290 800 aaKnown RBP12.79□□□□□ -0.36
SPTBN1-203ENST00000389980 TRAPPC3O43617 180 aa12.79□□□□□ -0.36
SPTBN1-203ENST00000389980 KRT1P04264 644 aa12.79□□□□□ -0.36
SPTBN1-203ENST00000389980 RALAP11233 206 aa12.79□□□□□ -0.36
SPTBN1-203ENST00000389980 PAX3P23760 479 aa12.79□□□□□ -0.36
SPTBN1-203ENST00000389980 TKTL1P51854 596 aa12.79□□□□□ -0.36
SPTBN1-203ENST00000389980 SNX16P57768 344 aa12.79□□□□□ -0.36
SPTBN1-203ENST00000389980 ADCY1Q08828 1119 aa12.79□□□□□ -0.36
SPTBN1-203ENST00000389980 SMC1AQ14683 1233 aaKnown RBP12.79□□□□□ -0.36
SPTBN1-203ENST00000389980 SLC39A12Q504Y0 691 aa12.79□□□□□ -0.36
SPTBN1-203ENST00000389980 VARS2Q5ST30 1063 aaKnown RBP12.79□□□□□ -0.36
SPTBN1-203ENST00000389980 TAS1R1Q7RTX1 841 aa12.79□□□□□ -0.36
SPTBN1-203ENST00000389980 SPATA18Q8TC71 538 aa12.79□□□□□ -0.36
SPTBN1-203ENST00000389980 FAM149B1Q96BN6 582 aa12.79□□□□□ -0.36
SPTBN1-203ENST00000389980 SMARCD1Q96GM5 515 aa12.79□□□□□ -0.36
SPTBN1-203ENST00000389980 PEBP4Q96S96 227 aa12.79□□□□□ -0.36
SPTBN1-203ENST00000389980 NAP1L3Q99457 506 aaPredicted RBP12.79□□□□□ -0.36
SPTBN1-203ENST00000389980 CNPY3Q9BT09 278 aa12.79□□□□□ -0.36
SPTBN1-203ENST00000389980 MRPL9Q9BYD2 267 aaKnown RBP12.79□□□□□ -0.36
SPTBN1-203ENST00000389980 MCOLN1Q9GZU1 580 aa12.79□□□□□ -0.36
SPTBN1-203ENST00000389980 AMACRQ9UHK6 382 aa12.79□□□□□ -0.36
SPTBN1-203ENST00000389980 LTBP2Q14767 1821 aa12.78□□□□□ -0.36
SPTBN1-203ENST00000389980 DGKIO75912 1065 aa12.78□□□□□ -0.36
SPTBN1-203ENST00000389980 RNF8O76064 485 aa12.78□□□□□ -0.36
SPTBN1-203ENST00000389980 OAZ2O95190 189 aa12.78□□□□□ -0.36
SPTBN1-203ENST00000389980 GLI1P08151 1106 aa12.78□□□□□ -0.36
SPTBN1-203ENST00000389980 RARAP10276 462 aa12.78□□□□□ -0.36
SPTBN1-203ENST00000389980 KRT10P13645 584 aa12.78□□□□□ -0.36
SPTBN1-203ENST00000389980 ADCY2Q08462 1091 aa12.78□□□□□ -0.36
SPTBN1-203ENST00000389980 SIX1Q15475 284 aaPredicted RBP12.78□□□□□ -0.36
SPTBN1-203ENST00000389980 MFSD7Q6UXD7 560 aa12.78□□□□□ -0.36
SPTBN1-203ENST00000389980 HFE2Q6ZVN8 426 aa12.78□□□□□ -0.36
SPTBN1-203ENST00000389980 SLC26A9Q7LBE3 791 aa12.78□□□□□ -0.36
SPTBN1-203ENST00000389980 ZDHHC17Q8IUH5 632 aa12.78□□□□□ -0.36
SPTBN1-203ENST00000389980 GSPT2Q8IYD1 628 aaKnown RBP12.78□□□□□ -0.36
SPTBN1-203ENST00000389980 SIX6OS1Q8N1H7 587 aa12.78□□□□□ -0.36
SPTBN1-203ENST00000389980 LRRC43Q8N309 656 aa12.78□□□□□ -0.36
SPTBN1-203ENST00000389980 PRELID2Q8N945 189 aa12.78□□□□□ -0.36
SPTBN1-203ENST00000389980 COLEC11Q9BWP8 271 aa12.78□□□□□ -0.36
SPTBN1-203ENST00000389980 ULBP1Q9BZM6 244 aa12.78□□□□□ -0.36
SPTBN1-203ENST00000389980 ARFGAP3Q9NP61 516 aa12.78□□□□□ -0.36
SPTBN1-203ENST00000389980 NGRNQ9NPE2 291 aaKnown RBP12.78□□□□□ -0.36
SPTBN1-203ENST00000389980 CYLDQ9NQC7 956 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms