RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 MRPL1Q9BYD6 325 aaKnown RBP15.29■□□□□ 0.04
VPS9D1-201ENST00000389386 SMYD3Q9H7B4 428 aa15.29■□□□□ 0.04
VPS9D1-201ENST00000389386 ZNF696Q9H7X3 374 aa15.29■□□□□ 0.04
VPS9D1-201ENST00000389386 ZNF180Q9UJW8 692 aa15.29■□□□□ 0.04
VPS9D1-201ENST00000389386 AK5Q9Y6K8 562 aa15.29■□□□□ 0.04
VPS9D1-201ENST00000389386 NFKBIEO00221 500 aa15.28■□□□□ 0.04
VPS9D1-201ENST00000389386 CDH2P19022 906 aaPredicted RBP15.28■□□□□ 0.04
VPS9D1-201ENST00000389386 ARSEP51690 589 aa15.28■□□□□ 0.04
VPS9D1-201ENST00000389386 VCPP55072 806 aaKnown RBP15.28■□□□□ 0.04
VPS9D1-201ENST00000389386 ZNF200P98182 395 aaPredicted RBP15.28■□□□□ 0.04
VPS9D1-201ENST00000389386 SLC25A3Q00325 362 aa15.28■□□□□ 0.04
VPS9D1-201ENST00000389386 PLCB3Q01970 1234 aa15.28■□□□□ 0.04
VPS9D1-201ENST00000389386 PPP3CAQ08209 521 aa15.28■□□□□ 0.04
VPS9D1-201ENST00000389386 KBTBD12Q3ZCT8 623 aa15.28■□□□□ 0.04
VPS9D1-201ENST00000389386 OGFRL1Q5TC84 451 aaPredicted RBP15.28■□□□□ 0.04
VPS9D1-201ENST00000389386 RINT1Q6NUQ1 792 aa15.28■□□□□ 0.04
VPS9D1-201ENST00000389386 AHI1Q8N157 1196 aa15.28■□□□□ 0.04
VPS9D1-201ENST00000389386 DQX1Q8TE96 717 aaKnown RBP15.28■□□□□ 0.04
VPS9D1-201ENST00000389386 WWP1Q9H0M0 922 aa15.28■□□□□ 0.04
VPS9D1-201ENST00000389386 INPP5FQ9Y2H2 1132 aa15.28■□□□□ 0.04
VPS9D1-201ENST00000389386 DTNAQ9Y4J8 743 aa15.28■□□□□ 0.04
VPS9D1-201ENST00000389386 ATP2A1O14983 1001 aa15.28■□□□□ 0.04
VPS9D1-201ENST00000389386 SERPINB7O75635 380 aa15.28■□□□□ 0.04
VPS9D1-201ENST00000389386 FAM13AO94988 1023 aa15.28■□□□□ 0.04
VPS9D1-201ENST00000389386 MT-ND3P03897 115 aa15.28■□□□□ 0.04
VPS9D1-201ENST00000389386 C6orf222P0C671 652 aaPredicted RBP15.28■□□□□ 0.04
VPS9D1-201ENST00000389386 IRX4P78413 519 aa15.28■□□□□ 0.04
VPS9D1-201ENST00000389386 MYBPC1Q00872 1141 aa15.28■□□□□ 0.04
VPS9D1-201ENST00000389386 APOFQ13790 326 aa15.28■□□□□ 0.04
VPS9D1-201ENST00000389386 KRT81Q14533 505 aa15.28■□□□□ 0.04
VPS9D1-201ENST00000389386 RNASEH2BQ5TBB1 312 aaKnown RBP15.28■□□□□ 0.04
VPS9D1-201ENST00000389386 PGM2L1Q6PCE3 622 aa15.28■□□□□ 0.04
VPS9D1-201ENST00000389386 PLEKHO2Q8TD55 490 aa15.28■□□□□ 0.04
VPS9D1-201ENST00000389386 JADE3Q92613 823 aa15.28■□□□□ 0.04
VPS9D1-201ENST00000389386 KREMEN1Q96MU8 473 aa15.28■□□□□ 0.04
VPS9D1-201ENST00000389386 IDI2Q9BXS1 227 aa15.28■□□□□ 0.04
VPS9D1-201ENST00000389386 ACSS3Q9H6R3 686 aa15.28■□□□□ 0.04
VPS9D1-201ENST00000389386 THEGQ9P2T0 379 aa15.28■□□□□ 0.04
VPS9D1-201ENST00000389386 ZNHIT2Q9UHR6 403 aa15.28■□□□□ 0.04
VPS9D1-201ENST00000389386 MAD1L1Q9Y6D9 718 aa15.28■□□□□ 0.04
VPS9D1-201ENST00000389386 HTR3EA5X5Y0 456 aa15.27■□□□□ 0.04
VPS9D1-201ENST00000389386 LIASO43766 372 aa15.27■□□□□ 0.04
VPS9D1-201ENST00000389386 SLITRK3O94933 977 aa15.27■□□□□ 0.04
VPS9D1-201ENST00000389386 RAG1P15918 1043 aa15.27■□□□□ 0.04
VPS9D1-201ENST00000389386 GLRA2P23416 452 aa15.27■□□□□ 0.04
VPS9D1-201ENST00000389386 ALDH18A1P54886 795 aaKnown RBP15.27■□□□□ 0.04
VPS9D1-201ENST00000389386 CYP4A11Q02928 519 aa15.27■□□□□ 0.04
VPS9D1-201ENST00000389386 PDCD4Q53EL6 469 aaKnown RBP15.27■□□□□ 0.04
VPS9D1-201ENST00000389386 PAOXQ6QHF9 649 aa15.27■□□□□ 0.04
VPS9D1-201ENST00000389386 ANO5Q75V66 913 aa15.27■□□□□ 0.04
VPS9D1-201ENST00000389386 ERI1Q8IV48 349 aaKnown RBP15.27■□□□□ 0.04
VPS9D1-201ENST00000389386 NIM1KQ8IY84 436 aa15.27■□□□□ 0.04
VPS9D1-201ENST00000389386 PPM1KQ8N3J5 372 aa15.27■□□□□ 0.04
VPS9D1-201ENST00000389386 DDI1Q8WTU0 396 aa15.27■□□□□ 0.04
VPS9D1-201ENST00000389386 FIZ1Q96SL8 496 aa15.27■□□□□ 0.04
VPS9D1-201ENST00000389386 ITGB1BP2Q9UKP3 347 aa15.27■□□□□ 0.04
VPS9D1-201ENST00000389386 DNPEPQ9ULA0 475 aa15.27■□□□□ 0.04
VPS9D1-201ENST00000389386 FAF1Q9UNN5 650 aaPredicted RBP15.27■□□□□ 0.04
VPS9D1-201ENST00000389386 EFR3BQ9Y2G0 817 aa15.27■□□□□ 0.04
VPS9D1-201ENST00000389386 PPME1Q9Y570 386 aa15.27■□□□□ 0.04
VPS9D1-201ENST00000389386 H3BNX3 289 aa15.27■□□□□ 0.03
VPS9D1-201ENST00000389386 ADCY3O60266 1144 aa15.27■□□□□ 0.03
VPS9D1-201ENST00000389386 GRIN3BO60391 1043 aa15.27■□□□□ 0.03
VPS9D1-201ENST00000389386 SORBS2O94875 1100 aaKnown RBP15.27■□□□□ 0.03
VPS9D1-201ENST00000389386 TNFAIP8O95379 198 aa15.27■□□□□ 0.03
VPS9D1-201ENST00000389386 CYP11B1P15538 503 aa15.27■□□□□ 0.03
VPS9D1-201ENST00000389386 BTKQ06187 659 aa15.27■□□□□ 0.03
VPS9D1-201ENST00000389386 CETN1Q12798 172 aa15.27■□□□□ 0.03
VPS9D1-201ENST00000389386 USP41Q3LFD5 358 aa15.27■□□□□ 0.03
VPS9D1-201ENST00000389386 PRR16Q569H4 304 aa15.27■□□□□ 0.03
VPS9D1-201ENST00000389386 RALGPS1Q5JS13 557 aa15.27■□□□□ 0.03
VPS9D1-201ENST00000389386 SH2D5Q6ZV89 423 aa15.27■□□□□ 0.03
VPS9D1-201ENST00000389386 CCDC80Q76M96 950 aa15.27■□□□□ 0.03
VPS9D1-201ENST00000389386 ZNF720Q7Z2F6 126 aa15.27■□□□□ 0.03
VPS9D1-201ENST00000389386 ACER1Q8TDN7 264 aa15.27■□□□□ 0.03
VPS9D1-201ENST00000389386 APOPT1Q96IL0 206 aa15.27■□□□□ 0.03
VPS9D1-201ENST00000389386 SERAC1Q96JX3 654 aa15.27■□□□□ 0.03
VPS9D1-201ENST00000389386 C7orf26Q96N11 449 aa15.27■□□□□ 0.03
VPS9D1-201ENST00000389386 RABGAP1Q9Y3P9 1069 aa15.27■□□□□ 0.03
VPS9D1-201ENST00000389386 DKC1O60832 514 aaKnown RBP eCLIP15.26■□□□□ 0.03
VPS9D1-201ENST00000389386 AOC1P19801 751 aa15.26■□□□□ 0.03
VPS9D1-201ENST00000389386 PHBP35232 272 aa15.26■□□□□ 0.03
VPS9D1-201ENST00000389386 SERPINB6P35237 376 aa15.26■□□□□ 0.03
VPS9D1-201ENST00000389386 ALDH1A3P47895 512 aa15.26■□□□□ 0.03
VPS9D1-201ENST00000389386 GCLMP48507 274 aa15.26■□□□□ 0.03
VPS9D1-201ENST00000389386 NR1H2P55055 460 aa15.26■□□□□ 0.03
VPS9D1-201ENST00000389386 SLC18A2Q05940 514 aa15.26■□□□□ 0.03
VPS9D1-201ENST00000389386 UBAP2LQ14157 1087 aaKnown RBP15.26■□□□□ 0.03
VPS9D1-201ENST00000389386 KLHL38Q2WGJ6 581 aa15.26■□□□□ 0.03
VPS9D1-201ENST00000389386 PACS1Q6VY07 963 aa15.26■□□□□ 0.03
VPS9D1-201ENST00000389386 SLC9A9Q8IVB4 645 aa15.26■□□□□ 0.03
VPS9D1-201ENST00000389386 ARID3BQ8IVW6 561 aaPredicted RBP15.26■□□□□ 0.03
VPS9D1-201ENST00000389386 CYP2W1Q8TAV3 490 aa15.26■□□□□ 0.03
VPS9D1-201ENST00000389386 SHOC2Q9UQ13 582 aa15.26■□□□□ 0.03
VPS9D1-201ENST00000389386 MEIS2O14770 477 aa15.26■□□□□ 0.03
VPS9D1-201ENST00000389386 CBFA2T3O75081 653 aa15.26■□□□□ 0.03
VPS9D1-201ENST00000389386 AQP5P55064 265 aa15.26■□□□□ 0.03
VPS9D1-201ENST00000389386 RELAQ04206 551 aa15.26■□□□□ 0.03
VPS9D1-201ENST00000389386 CXCL9Q07325 125 aa15.26■□□□□ 0.03
VPS9D1-201ENST00000389386 RABGAP1LQ5R372 815 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms