RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 CCDC90BQ9GZT6 254 aa13.64□□□□□ -0.23
TRAPPC9-201ENST00000389328 CHCHD3Q9NX63 227 aaKnown RBP13.64□□□□□ -0.23
TRAPPC9-201ENST00000389328 ATF5Q9Y2D1 282 aaPredicted RBP13.64□□□□□ -0.23
TRAPPC9-201ENST00000389328 CNTNAP4Q9C0A0 1308 aa13.64□□□□□ -0.23
TRAPPC9-201ENST00000389328 WDR4P57081 412 aaKnown RBP13.64□□□□□ -0.23
TRAPPC9-201ENST00000389328 USP10Q14694 798 aaKnown RBP13.64□□□□□ -0.23
TRAPPC9-201ENST00000389328 CIAPIN1Q6FI81 312 aa13.64□□□□□ -0.23
TRAPPC9-201ENST00000389328 RFWD3Q6PCD5 774 aa13.64□□□□□ -0.23
TRAPPC9-201ENST00000389328 DSTYKQ6XUX3 929 aa13.64□□□□□ -0.23
TRAPPC9-201ENST00000389328 MYLK4Q86YV6 388 aaPredicted RBP13.64□□□□□ -0.23
TRAPPC9-201ENST00000389328 UCMAQ8WVF2 138 aa13.64□□□□□ -0.23
TRAPPC9-201ENST00000389328 USP18Q9UMW8 372 aa13.64□□□□□ -0.23
TRAPPC9-201ENST00000389328 DCXO43602 365 aa13.63□□□□□ -0.23
TRAPPC9-201ENST00000389328 RALBP11234 206 aa13.63□□□□□ -0.23
TRAPPC9-201ENST00000389328 STAT5BP51692 787 aa13.63□□□□□ -0.23
TRAPPC9-201ENST00000389328 ITGA9Q13797 1035 aa13.63□□□□□ -0.23
TRAPPC9-201ENST00000389328 SLC44A4Q53GD3 710 aa13.63□□□□□ -0.23
TRAPPC9-201ENST00000389328 TEDDM1Q5T9Z0 273 aa13.63□□□□□ -0.23
TRAPPC9-201ENST00000389328 FAM163AQ96GL9 167 aaPredicted RBP13.63□□□□□ -0.23
TRAPPC9-201ENST00000389328 SLITRK1Q96PX8 696 aa13.63□□□□□ -0.23
TRAPPC9-201ENST00000389328 NMUR2Q9GZQ4 415 aa13.63□□□□□ -0.23
TRAPPC9-201ENST00000389328 MRPL40Q9NQ50 206 aaKnown RBP13.63□□□□□ -0.23
TRAPPC9-201ENST00000389328 ROBO3Q96MS0 1386 aa13.63□□□□□ -0.23
TRAPPC9-201ENST00000389328 FMN2Q9NZ56 1722 aa13.63□□□□□ -0.23
TRAPPC9-201ENST00000389328 TBC1D12O60347 775 aa13.63□□□□□ -0.23
TRAPPC9-201ENST00000389328 GLRA3O75311 464 aa13.63□□□□□ -0.23
TRAPPC9-201ENST00000389328 ENTPD3O75355 529 aa13.63□□□□□ -0.23
TRAPPC9-201ENST00000389328 ZMPSTE24O75844 475 aa13.63□□□□□ -0.23
TRAPPC9-201ENST00000389328 ZFXP17010 805 aaPredicted RBP13.63□□□□□ -0.23
TRAPPC9-201ENST00000389328 ADRA2BP18089 450 aa13.63□□□□□ -0.23
TRAPPC9-201ENST00000389328 ECHS1P30084 290 aa13.63□□□□□ -0.23
TRAPPC9-201ENST00000389328 NLRP11P59045 1033 aaKnown RBP13.63□□□□□ -0.23
TRAPPC9-201ENST00000389328 CCDC15Q0P6D6 951 aa13.63□□□□□ -0.23
TRAPPC9-201ENST00000389328 N4BP2L1Q5TBK1 243 aaPredicted RBP13.63□□□□□ -0.23
TRAPPC9-201ENST00000389328 DENND5BQ6ZUT9 1274 aa13.63□□□□□ -0.23
TRAPPC9-201ENST00000389328 CCNJLQ8IV13 435 aa13.63□□□□□ -0.23
TRAPPC9-201ENST00000389328 LRRC71Q8N4P6 559 aa13.63□□□□□ -0.23
TRAPPC9-201ENST00000389328 ASAP3Q8TDY4 903 aa13.63□□□□□ -0.23
TRAPPC9-201ENST00000389328 TRAPPC9Q96Q05 1148 aa13.63□□□□□ -0.23
TRAPPC9-201ENST00000389328 SLC39A10Q9ULF5 831 aa13.63□□□□□ -0.23
TRAPPC9-201ENST00000389328 NUB1Q9Y5A7 615 aa13.63□□□□□ -0.23
TRAPPC9-201ENST00000389328 RPS6KL1Q9Y6S9 549 aa13.63□□□□□ -0.23
TRAPPC9-201ENST00000389328 SPRP35270 261 aaPredicted RBP13.63□□□□□ -0.23
TRAPPC9-201ENST00000389328 SLC9A9Q8IVB4 645 aa13.63□□□□□ -0.23
TRAPPC9-201ENST00000389328 ALLCQ8N6M5 410 aa13.63□□□□□ -0.23
TRAPPC9-201ENST00000389328 ZBTB45Q96K62 511 aaPredicted RBP13.63□□□□□ -0.23
TRAPPC9-201ENST00000389328 PRMT6Q96LA8 375 aaPredicted RBP13.63□□□□□ -0.23
TRAPPC9-201ENST00000389328 PRPF18Q99633 342 aaKnown RBP13.63□□□□□ -0.23
TRAPPC9-201ENST00000389328 TMEM39BQ9GZU3 492 aa13.63□□□□□ -0.23
TRAPPC9-201ENST00000389328 IL1RL2Q9HB29 575 aa13.63□□□□□ -0.23
TRAPPC9-201ENST00000389328 RPL22P35268 128 aaKnown RBP13.62□□□□□ -0.23
TRAPPC9-201ENST00000389328 RAP1GAPP47736 663 aa13.62□□□□□ -0.23
TRAPPC9-201ENST00000389328 HDAC4P56524 1084 aa13.62□□□□□ -0.23
TRAPPC9-201ENST00000389328 CWF19L1Q69YN2 538 aaKnown RBP13.62□□□□□ -0.23
TRAPPC9-201ENST00000389328 POLNQ7Z5Q5 900 aa13.62□□□□□ -0.23
TRAPPC9-201ENST00000389328 CYGBQ8WWM9 190 aa13.62□□□□□ -0.23
TRAPPC9-201ENST00000389328 GRIP2Q9C0E4 1043 aa13.62□□□□□ -0.23
TRAPPC9-201ENST00000389328 C17orf75Q9HAS0 396 aa13.62□□□□□ -0.23
TRAPPC9-201ENST00000389328 KRT82Q9NSB4 513 aa13.62□□□□□ -0.23
TRAPPC9-201ENST00000389328 KCNK4Q9NYG8 393 aa13.62□□□□□ -0.23
TRAPPC9-201ENST00000389328 CSDE1O75534 798 aaKnown RBP13.62□□□□□ -0.23
TRAPPC9-201ENST00000389328 PSMC3P17980 439 aa13.62□□□□□ -0.23
TRAPPC9-201ENST00000389328 EFNA5P52803 228 aa13.62□□□□□ -0.23
TRAPPC9-201ENST00000389328 PLOD1Q02809 727 aaPredicted RBP13.62□□□□□ -0.23
TRAPPC9-201ENST00000389328 UBAP2LQ14157 1087 aaKnown RBP13.62□□□□□ -0.23
TRAPPC9-201ENST00000389328 ACBD5Q5T8D3 534 aaPredicted RBP13.62□□□□□ -0.23
TRAPPC9-201ENST00000389328 MTHFD1LQ6UB35 978 aa13.62□□□□□ -0.23
TRAPPC9-201ENST00000389328 ZNF398Q8TD17 642 aa13.62□□□□□ -0.23
TRAPPC9-201ENST00000389328 L3MBTL3Q96JM7 780 aaPredicted RBP13.62□□□□□ -0.23
TRAPPC9-201ENST00000389328 GORASP1Q9BQQ3 440 aa13.62□□□□□ -0.23
TRAPPC9-201ENST00000389328 TRIM15Q9C019 465 aa13.62□□□□□ -0.23
TRAPPC9-201ENST00000389328 ASCC2Q9H1I8 757 aaPredicted RBP13.62□□□□□ -0.23
TRAPPC9-201ENST00000389328 SNX13Q9Y5W8 968 aa13.62□□□□□ -0.23
TRAPPC9-201ENST00000389328 SNX9Q9Y5X1 595 aa13.62□□□□□ -0.23
TRAPPC9-201ENST00000389328 TTC36A6NLP5 189 aa13.62□□□□□ -0.23
TRAPPC9-201ENST00000389328 ALOX15BO15296 676 aa13.62□□□□□ -0.23
TRAPPC9-201ENST00000389328 POLBP06746 335 aa13.62□□□□□ -0.23
TRAPPC9-201ENST00000389328 SLC1A6P48664 564 aa13.62□□□□□ -0.23
TRAPPC9-201ENST00000389328 OCA2Q04671 838 aa13.62□□□□□ -0.23
TRAPPC9-201ENST00000389328 C4orf19Q8IY42 314 aa13.62□□□□□ -0.23
TRAPPC9-201ENST00000389328 GMCL1P1Q8NEA9 526 aa13.62□□□□□ -0.23
TRAPPC9-201ENST00000389328 JADE3Q92613 823 aa13.62□□□□□ -0.23
TRAPPC9-201ENST00000389328 ATP6V1E2Q96A05 226 aa13.62□□□□□ -0.23
TRAPPC9-201ENST00000389328 ECSITQ9BQ95 431 aa13.62□□□□□ -0.23
TRAPPC9-201ENST00000389328 AGO4Q9HCK5 861 aaKnown RBP13.62□□□□□ -0.23
TRAPPC9-201ENST00000389328 TBC1D23Q9NUY8 699 aa13.62□□□□□ -0.23
TRAPPC9-201ENST00000389328 THAP1Q9NVV9 213 aa13.62□□□□□ -0.23
TRAPPC9-201ENST00000389328 VAV3Q9UKW4 847 aa13.62□□□□□ -0.23
TRAPPC9-201ENST00000389328 KCTD2Q14681 263 aa13.62□□□□□ -0.23
TRAPPC9-201ENST00000389328 BNC2Q6ZN30 1099 aaPredicted RBP13.62□□□□□ -0.23
TRAPPC9-201ENST00000389328 MARK2Q7KZI7 788 aaKnown RBP13.62□□□□□ -0.23
TRAPPC9-201ENST00000389328 GSTCDQ8NEC7 633 aa13.62□□□□□ -0.23
TRAPPC9-201ENST00000389328 SH3TC2Q8TF17 1288 aa13.62□□□□□ -0.23
TRAPPC9-201ENST00000389328 GFM2Q969S9 779 aaKnown RBP13.62□□□□□ -0.23
TRAPPC9-201ENST00000389328 PBXIP1Q96AQ6 731 aa13.62□□□□□ -0.23
TRAPPC9-201ENST00000389328 CADM1Q9BY67 442 aaKnown RBP13.62□□□□□ -0.23
TRAPPC9-201ENST00000389328 FRMD8Q9BZ67 464 aaPredicted RBP13.62□□□□□ -0.23
TRAPPC9-201ENST00000389328 ILKAPQ9H0C8 392 aaPredicted RBP13.62□□□□□ -0.23
TRAPPC9-201ENST00000389328 FAM49AQ9H0Q0 323 aaPredicted RBP13.62□□□□□ -0.23
TRAPPC9-201ENST00000389328 IPO11Q9UI26 975 aaKnown RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms