RNA–Protein interactions for RNA: ENST00000385297.1

MIR548A3-201, Transcript of microRNA 548a-3, humanhuman

BASIC

Gene MIR548A3, Length 97 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR548A3-201ENST00000385297 CCNL1Q9UK58 526 aaPredicted RBP1.35□□□□□ -2.19
MIR548A3-201ENST00000385297 AGAP1Q9UPQ3 857 aa1.35□□□□□ -2.19
MIR548A3-201ENST00000385297 PCDHGA2Q9Y5H1 932 aa1.35□□□□□ -2.19
MIR548A3-201ENST00000385297 PRSS29PA6NIE9 313 aa1.34□□□□□ -2.19
MIR548A3-201ENST00000385297 ZNF785A8K8V0 405 aa1.34□□□□□ -2.19
MIR548A3-201ENST00000385297 VPS4BO75351 444 aa1.34□□□□□ -2.19
MIR548A3-201ENST00000385297 FGAP02671 866 aa1.34□□□□□ -2.19
MIR548A3-201ENST00000385297 PIM1P11309 404 aaPredicted RBP1.34□□□□□ -2.19
MIR548A3-201ENST00000385297 APEHP13798 732 aaKnown RBP1.34□□□□□ -2.19
MIR548A3-201ENST00000385297 ZNF135P52742 658 aaPredicted RBP1.34□□□□□ -2.19
MIR548A3-201ENST00000385297 CRIP2P52943 208 aaPredicted RBP1.34□□□□□ -2.19
MIR548A3-201ENST00000385297 SLC5A3P53794 718 aa1.34□□□□□ -2.19
MIR548A3-201ENST00000385297 SESN3P58005 492 aa1.34□□□□□ -2.19
MIR548A3-201ENST00000385297 YPEL5P62699 121 aa1.34□□□□□ -2.19
MIR548A3-201ENST00000385297 PSG6Q00889 435 aa1.34□□□□□ -2.19
MIR548A3-201ENST00000385297 SQSTM1Q13501 440 aa1.34□□□□□ -2.19
MIR548A3-201ENST00000385297 PTGR1Q14914 329 aa1.34□□□□□ -2.19
MIR548A3-201ENST00000385297 SHBQ15464 509 aa1.34□□□□□ -2.19
MIR548A3-201ENST00000385297 ZRSR1Q15695 479 aaKnown RBP1.34□□□□□ -2.19
MIR548A3-201ENST00000385297 ZNF672Q499Z4 452 aaPredicted RBP1.34□□□□□ -2.19
MIR548A3-201ENST00000385297 ATP13A4Q4VNC1 1196 aa1.34□□□□□ -2.19
MIR548A3-201ENST00000385297 EARS2Q5JPH6 523 aaKnown RBP1.34□□□□□ -2.19
MIR548A3-201ENST00000385297 KIAA1755Q5JYT7 1200 aa1.34□□□□□ -2.19
MIR548A3-201ENST00000385297 TMEM63BQ5T3F8 832 aa1.34□□□□□ -2.19
MIR548A3-201ENST00000385297 RHBDF2Q6PJF5 856 aa1.34□□□□□ -2.19
MIR548A3-201ENST00000385297 RANBP10Q6VN20 620 aa1.34□□□□□ -2.19
MIR548A3-201ENST00000385297 DGLUCYQ7Z3D6 616 aa1.34□□□□□ -2.19
MIR548A3-201ENST00000385297 MORC1Q86VD1 984 aa1.34□□□□□ -2.19
MIR548A3-201ENST00000385297 LRRTM3Q86VH5 581 aa1.34□□□□□ -2.19
MIR548A3-201ENST00000385297 CLRN3Q8NCR9 226 aa1.34□□□□□ -2.19
MIR548A3-201ENST00000385297 LMBR1Q8WVP7 490 aa1.34□□□□□ -2.19
MIR548A3-201ENST00000385297 DPF2Q92785 391 aa1.34□□□□□ -2.19
MIR548A3-201ENST00000385297 ANKRD9Q96BM1 317 aaPredicted RBP1.34□□□□□ -2.19
MIR548A3-201ENST00000385297 MRGPRX4Q96LA9 322 aa1.34□□□□□ -2.19
MIR548A3-201ENST00000385297 TM6SF1Q9BZW5 370 aa1.34□□□□□ -2.19
MIR548A3-201ENST00000385297 SIDT1Q9NXL6 827 aaKnown RBP1.34□□□□□ -2.19
MIR548A3-201ENST00000385297 SGTAO43765 313 aa1.33□□□□□ -2.2
MIR548A3-201ENST00000385297 ATG13O75143 517 aa1.33□□□□□ -2.2
MIR548A3-201ENST00000385297 KIF20AO95235 890 aa1.33□□□□□ -2.2
MIR548A3-201ENST00000385297 IGLV2-11P01706 119 aa1.33□□□□□ -2.2
MIR548A3-201ENST00000385297 GJB1P08034 283 aa1.33□□□□□ -2.2
MIR548A3-201ENST00000385297 ATF7P17544 494 aaPredicted RBP1.33□□□□□ -2.2
MIR548A3-201ENST00000385297 MTNR1BP49286 362 aa1.33□□□□□ -2.2
MIR548A3-201ENST00000385297 POU3F1Q03052 451 aaPredicted RBP1.33□□□□□ -2.2
MIR548A3-201ENST00000385297 TLE1Q04724 770 aa1.33□□□□□ -2.2
MIR548A3-201ENST00000385297 COASYQ13057 564 aa1.33□□□□□ -2.2
MIR548A3-201ENST00000385297 RAB39AQ14964 217 aa1.33□□□□□ -2.2
MIR548A3-201ENST00000385297 ZIK1Q3SY52 487 aaPredicted RBP1.33□□□□□ -2.2
MIR548A3-201ENST00000385297 ANO6Q4KMQ2 910 aa1.33□□□□□ -2.2
MIR548A3-201ENST00000385297 CCDC93Q567U6 631 aa1.33□□□□□ -2.2
MIR548A3-201ENST00000385297 TOR2AQ5JU69 321 aa1.33□□□□□ -2.2
MIR548A3-201ENST00000385297 WASHC2DQ5SRD0 308 aa1.33□□□□□ -2.2
MIR548A3-201ENST00000385297 TMCO4Q5TGY1 634 aa1.33□□□□□ -2.2
MIR548A3-201ENST00000385297 C9orf57Q5W0N0 161 aa1.33□□□□□ -2.2
MIR548A3-201ENST00000385297 WBP2NLQ6ICG8 309 aa1.33□□□□□ -2.2
MIR548A3-201ENST00000385297 LIN28BQ6ZN17 250 aaKnown RBP eCLIP1.33□□□□□ -2.2
MIR548A3-201ENST00000385297 RNF180Q86T96 592 aa1.33□□□□□ -2.2
MIR548A3-201ENST00000385297 RSPH3Q86UC2 560 aa1.33□□□□□ -2.2
MIR548A3-201ENST00000385297 TMEM199Q8N511 208 aa1.33□□□□□ -2.2
MIR548A3-201ENST00000385297 TGFBRAP1Q8WUH2 860 aa1.33□□□□□ -2.2
MIR548A3-201ENST00000385297 JPH3Q8WXH2 748 aaPredicted RBP1.33□□□□□ -2.2
MIR548A3-201ENST00000385297 RAB24Q969Q5 203 aa1.33□□□□□ -2.2
MIR548A3-201ENST00000385297 ZNF414Q96IQ9 312 aa1.33□□□□□ -2.2
MIR548A3-201ENST00000385297 SRPK1Q96SB4 655 aaKnown RBP1.33□□□□□ -2.2
MIR548A3-201ENST00000385297 PTDSS2Q9BVG9 487 aa1.33□□□□□ -2.2
MIR548A3-201ENST00000385297 SIK2Q9H0K1 926 aa1.33□□□□□ -2.2
MIR548A3-201ENST00000385297 BRD9Q9H8M2 597 aa1.33□□□□□ -2.2
MIR548A3-201ENST00000385297 SDF2L1Q9HCN8 221 aa1.33□□□□□ -2.2
MIR548A3-201ENST00000385297 TDP1Q9NUW8 608 aa1.33□□□□□ -2.2
MIR548A3-201ENST00000385297 TMEM45AQ9NWC5 275 aa1.33□□□□□ -2.2
MIR548A3-201ENST00000385297 PLK2Q9NYY3 685 aa1.33□□□□□ -2.2
MIR548A3-201ENST00000385297 MSRB1Q9NZV6 116 aa1.33□□□□□ -2.2
MIR548A3-201ENST00000385297 MAFFQ9ULX9 164 aa1.33□□□□□ -2.2
MIR548A3-201ENST00000385297 COG5Q9UP83 839 aa1.33□□□□□ -2.2
MIR548A3-201ENST00000385297 DNM3Q9UQ16 869 aa1.33□□□□□ -2.2
MIR548A3-201ENST00000385297 A0A0G2JK05 382 aa1.32□□□□□ -2.2
MIR548A3-201ENST00000385297 DENND3A2RUS2 1198 aa1.32□□□□□ -2.2
MIR548A3-201ENST00000385297 C2CD4BA6NLJ0 364 aa1.32□□□□□ -2.2
MIR548A3-201ENST00000385297 AP4M1O00189 453 aa1.32□□□□□ -2.2
MIR548A3-201ENST00000385297 F2RL2O00254 374 aa1.32□□□□□ -2.2
MIR548A3-201ENST00000385297 AKAP10O43572 662 aa1.32□□□□□ -2.2
MIR548A3-201ENST00000385297 HOXC6P09630 235 aa1.32□□□□□ -2.2
MIR548A3-201ENST00000385297 CYP2C19P33261 490 aa1.32□□□□□ -2.2
MIR548A3-201ENST00000385297 LOXL3P58215 753 aa1.32□□□□□ -2.2
MIR548A3-201ENST00000385297 PSMC1P62191 440 aaKnown RBP1.32□□□□□ -2.2
MIR548A3-201ENST00000385297 SRSF2Q01130 221 aaKnown RBP1.32□□□□□ -2.2
MIR548A3-201ENST00000385297 PLEKHA7Q6IQ23 1121 aa1.32□□□□□ -2.2
MIR548A3-201ENST00000385297 TMEM65Q6PI78 240 aa1.32□□□□□ -2.2
MIR548A3-201ENST00000385297 C16orf82Q7Z2V1 217 aa1.32□□□□□ -2.2
MIR548A3-201ENST00000385297 ARMC9Q7Z3E5 817 aa1.32□□□□□ -2.2
MIR548A3-201ENST00000385297 CMIPQ8IY22 773 aa1.32□□□□□ -2.2
MIR548A3-201ENST00000385297 PPM1KQ8N3J5 372 aa1.32□□□□□ -2.2
MIR548A3-201ENST00000385297 BCAS4Q8TDM0 211 aa1.32□□□□□ -2.2
MIR548A3-201ENST00000385297 RSPRY1Q96DX4 576 aa1.32□□□□□ -2.2
MIR548A3-201ENST00000385297 PRR25Q96S07 402 aa1.32□□□□□ -2.2
MIR548A3-201ENST00000385297 NODALQ96S42 347 aa1.32□□□□□ -2.2
MIR548A3-201ENST00000385297 SEZ6LQ9BYH1 1024 aa1.32□□□□□ -2.2
MIR548A3-201ENST00000385297 PIF1Q9H611 641 aa1.32□□□□□ -2.2
MIR548A3-201ENST00000385297 CALCOCO1Q9P1Z2 691 aa1.32□□□□□ -2.2
MIR548A3-201ENST00000385297 CFAP97Q9P2B7 532 aa1.32□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms