RNA–Protein interactions for RNA: ENST00000381513.8

SMARCD1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCD1, Length 3,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-201ENST00000381513 ALDH16A1Q8IZ83 802 aa19.76■□□□□ 0.75
SMARCD1-201ENST00000381513 CENPSQ8N2Z9 138 aa19.76■□□□□ 0.75
SMARCD1-201ENST00000381513 DDX17Q92841 729 aaKnown RBP19.76■□□□□ 0.75
SMARCD1-201ENST00000381513 ATP6V0A1Q93050 837 aa19.76■□□□□ 0.75
SMARCD1-201ENST00000381513 ACSS3Q9H6R3 686 aa19.76■□□□□ 0.75
SMARCD1-201ENST00000381513 XPNPEP1Q9NQW7 623 aa19.76■□□□□ 0.75
SMARCD1-201ENST00000381513 HOMER2Q9NSB8 354 aa19.76■□□□□ 0.75
SMARCD1-201ENST00000381513 PSMD13Q9UNM6 376 aa19.76■□□□□ 0.75
SMARCD1-201ENST00000381513 APOBEC2Q9Y235 224 aaKnown RBP19.76■□□□□ 0.75
SMARCD1-201ENST00000381513 PHRF1Q9P1Y6 1649 aaKnown RBP19.76■□□□□ 0.75
SMARCD1-201ENST00000381513 C10orf71Q711Q0 1435 aa19.76■□□□□ 0.75
SMARCD1-201ENST00000381513 SPATA31A1Q5TZJ5 1347 aa19.76■□□□□ 0.75
SMARCD1-201ENST00000381513 ZBED1O96006 694 aa19.76■□□□□ 0.75
SMARCD1-201ENST00000381513 CYP11B1P15538 503 aa19.76■□□□□ 0.75
SMARCD1-201ENST00000381513 KLRK1P26718 216 aa19.76■□□□□ 0.75
SMARCD1-201ENST00000381513 KLF1Q13351 362 aaPredicted RBP19.76■□□□□ 0.75
SMARCD1-201ENST00000381513 CDHR3Q6ZTQ4 885 aa19.76■□□□□ 0.75
SMARCD1-201ENST00000381513 DCAKDQ8WVC6 231 aa19.76■□□□□ 0.75
SMARCD1-201ENST00000381513 CPA5Q8WXQ8 436 aa19.76■□□□□ 0.75
SMARCD1-201ENST00000381513 ZNF512Q96ME7 567 aaPredicted RBP19.76■□□□□ 0.75
SMARCD1-201ENST00000381513 C10orf88Q9H8K7 445 aa19.76■□□□□ 0.75
SMARCD1-201ENST00000381513 PLCH1Q4KWH8 1693 aa19.75■□□□□ 0.75
SMARCD1-201ENST00000381513 SLC16A2P36021 539 aa19.75■□□□□ 0.75
SMARCD1-201ENST00000381513 STAT2P52630 851 aa19.75■□□□□ 0.75
SMARCD1-201ENST00000381513 PPP3CAQ08209 521 aa19.75■□□□□ 0.75
SMARCD1-201ENST00000381513 CD300CQ08708 224 aa19.75■□□□□ 0.75
SMARCD1-201ENST00000381513 ATP13A4Q4VNC1 1196 aa19.75■□□□□ 0.75
SMARCD1-201ENST00000381513 SYCP2LQ5T4T6 812 aa19.75■□□□□ 0.75
SMARCD1-201ENST00000381513 KRT80Q6KB66 452 aa19.75■□□□□ 0.75
SMARCD1-201ENST00000381513 ELMSAN1Q6PJG2 1045 aa19.75■□□□□ 0.75
SMARCD1-201ENST00000381513 DCDC5Q6ZRR9 648 aa19.75■□□□□ 0.75
SMARCD1-201ENST00000381513 CASQ2O14958 399 aaPredicted RBP19.75■□□□□ 0.75
SMARCD1-201ENST00000381513 MCF2LO15068 1137 aa19.75■□□□□ 0.75
SMARCD1-201ENST00000381513 DHRS4L1P0CG22 281 aa19.75■□□□□ 0.75
SMARCD1-201ENST00000381513 SPIDRQ14159 915 aa19.75■□□□□ 0.75
SMARCD1-201ENST00000381513 MSS51Q4VC12 460 aa19.75■□□□□ 0.75
SMARCD1-201ENST00000381513 LMO3Q8TAP4 145 aa19.75■□□□□ 0.75
SMARCD1-201ENST00000381513 SCINQ9Y6U3 715 aa19.75■□□□□ 0.75
SMARCD1-201ENST00000381513 CICQ96RK0 1608 aaPredicted RBP19.75■□□□□ 0.75
SMARCD1-201ENST00000381513 DOCK2Q92608 1830 aa19.75■□□□□ 0.75
SMARCD1-201ENST00000381513 H3BNX3 289 aa19.74■□□□□ 0.75
SMARCD1-201ENST00000381513 IPO5O00410 1097 aaKnown RBP19.74■□□□□ 0.75
SMARCD1-201ENST00000381513 NAT1P18440 290 aa19.74■□□□□ 0.75
SMARCD1-201ENST00000381513 HMOX2P30519 316 aa19.74■□□□□ 0.75
SMARCD1-201ENST00000381513 TAS2R40P59535 323 aa19.74■□□□□ 0.75
SMARCD1-201ENST00000381513 PSMC1P62191 440 aaKnown RBP19.74■□□□□ 0.75
SMARCD1-201ENST00000381513 APOFQ13790 326 aa19.74■□□□□ 0.75
SMARCD1-201ENST00000381513 NRF1Q16656 503 aa19.74■□□□□ 0.75
SMARCD1-201ENST00000381513 RHOT1Q8IXI2 618 aa19.74■□□□□ 0.75
SMARCD1-201ENST00000381513 CCDC33Q8N5R6 958 aa19.74■□□□□ 0.75
SMARCD1-201ENST00000381513 ALLCQ8N6M5 410 aa19.74■□□□□ 0.75
SMARCD1-201ENST00000381513 NLRP7Q8WX94 980 aa19.74■□□□□ 0.75
SMARCD1-201ENST00000381513 ZNF287Q9HBT7 754 aa19.74■□□□□ 0.75
SMARCD1-201ENST00000381513 SF3B1O75533 1304 aaKnown RBP eCLIP19.74■□□□□ 0.754e-7■■■■■ 133.7
SMARCD1-201ENST00000381513 LIASO43766 372 aa19.74■□□□□ 0.75
SMARCD1-201ENST00000381513 HSPA1LP34931 641 aa19.74■□□□□ 0.75
SMARCD1-201ENST00000381513 CDKL1Q00532 357 aa19.74■□□□□ 0.75
SMARCD1-201ENST00000381513 FNBP1LQ5T0N5 605 aa19.74■□□□□ 0.75
SMARCD1-201ENST00000381513 METTL21CQ5VZV1 264 aa19.74■□□□□ 0.75
SMARCD1-201ENST00000381513 LMBRD2Q68DH5 695 aaPredicted RBP19.74■□□□□ 0.75
SMARCD1-201ENST00000381513 ACAD10Q6JQN1 1059 aa19.74■□□□□ 0.75
SMARCD1-201ENST00000381513 XKR5Q6UX68 686 aa19.74■□□□□ 0.75
SMARCD1-201ENST00000381513 IFNLR1Q8IU57 520 aaPredicted RBP19.74■□□□□ 0.75
SMARCD1-201ENST00000381513 WDR75Q8IWA0 830 aaKnown RBP19.74■□□□□ 0.75
SMARCD1-201ENST00000381513 GRIN3AQ8TCU5 1115 aa19.74■□□□□ 0.75
SMARCD1-201ENST00000381513 WRNIP1Q96S55 665 aa19.74■□□□□ 0.75
SMARCD1-201ENST00000381513 NEURL2Q9BR09 285 aa19.74■□□□□ 0.75
SMARCD1-201ENST00000381513 NYXQ9GZU5 481 aa19.74■□□□□ 0.75
SMARCD1-201ENST00000381513 TMA7Q9Y2S6 64 aaKnown RBP19.74■□□□□ 0.75
SMARCD1-201ENST00000381513 TRIM49D1C9J1S8 452 aa19.74■□□□□ 0.75
SMARCD1-201ENST00000381513 ODR4Q5SWX8 454 aa19.74■□□□□ 0.75
SMARCD1-201ENST00000381513 RNASEH2BQ5TBB1 312 aaKnown RBP19.74■□□□□ 0.75
SMARCD1-201ENST00000381513 CPNE9Q8IYJ1 553 aa19.74■□□□□ 0.75
SMARCD1-201ENST00000381513 LARGE2Q8N3Y3 721 aa19.74■□□□□ 0.75
SMARCD1-201ENST00000381513 RIOX1Q9H6W3 641 aa19.74■□□□□ 0.75
SMARCD1-201ENST00000381513 C6orf203Q9P0P8 240 aaPredicted RBP19.74■□□□□ 0.75
SMARCD1-201ENST00000381513 ZNHIT2Q9UHR6 403 aa19.74■□□□□ 0.75
SMARCD1-201ENST00000381513 H0YIN7 160 aa19.73■□□□□ 0.75
SMARCD1-201ENST00000381513 NOP56O00567 594 aaKnown RBP19.73■□□□□ 0.75
SMARCD1-201ENST00000381513 CCDC153Q494R4 210 aa19.73■□□□□ 0.75
SMARCD1-201ENST00000381513 TPH2Q8IWU9 490 aa19.73■□□□□ 0.75
SMARCD1-201ENST00000381513 BORCS5Q969J3 196 aa19.73■□□□□ 0.75
SMARCD1-201ENST00000381513 C7orf26Q96N11 449 aa19.73■□□□□ 0.75
SMARCD1-201ENST00000381513 C17orf75Q9HAS0 396 aa19.73■□□□□ 0.75
SMARCD1-201ENST00000381513 PARVGQ9HBI0 331 aa19.73■□□□□ 0.75
SMARCD1-201ENST00000381513 EBF1Q9UH73 591 aa19.73■□□□□ 0.75
SMARCD1-201ENST00000381513 SPATA31C1P0DKV0 1188 aa19.73■□□□□ 0.75
SMARCD1-201ENST00000381513 RPA1P27694 616 aa19.73■□□□□ 0.75
SMARCD1-201ENST00000381513 ESRRGP62508 458 aa19.73■□□□□ 0.75
SMARCD1-201ENST00000381513 ANKRD22Q5VYY1 191 aa19.73■□□□□ 0.75
SMARCD1-201ENST00000381513 SLFN12Q8IYM2 578 aa19.73■□□□□ 0.75
SMARCD1-201ENST00000381513 FBXW8Q8N3Y1 598 aa19.73■□□□□ 0.75
SMARCD1-201ENST00000381513 MZB1Q8WU39 189 aa19.73■□□□□ 0.75
SMARCD1-201ENST00000381513 DHX38Q92620 1227 aaKnown RBP19.73■□□□□ 0.75
SMARCD1-201ENST00000381513 PLEKHA8Q96JA3 519 aa19.73■□□□□ 0.75
SMARCD1-201ENST00000381513 BIRC8Q96P09 236 aa19.73■□□□□ 0.75
SMARCD1-201ENST00000381513 SLC38A7Q9NVC3 462 aa19.73■□□□□ 0.75
SMARCD1-201ENST00000381513 SHOC2Q9UQ13 582 aa19.73■□□□□ 0.75
SMARCD1-201ENST00000381513 AOC1P19801 751 aa19.72■□□□□ 0.75
SMARCD1-201ENST00000381513 CDK8P49336 464 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms