RNA–Protein interactions for RNA: ENST00000381118.7

ERCC8-202, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 2

Gene ERCC8, Length 2,236 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-202ENST00000381118 FAM149B1Q96BN6 582 aa8.41□□□□□ -1.06
ERCC8-202ENST00000381118 SMOQ99835 787 aa8.41□□□□□ -1.06
ERCC8-202ENST00000381118 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.41□□□□□ -1.06
ERCC8-202ENST00000381118 RAB6CQ9H0N0 254 aa8.41□□□□□ -1.06
ERCC8-202ENST00000381118 ABI2Q9NYB9 513 aaPredicted RBP8.41□□□□□ -1.06
ERCC8-202ENST00000381118 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.41□□□□□ -1.06
ERCC8-202ENST00000381118 SF3B1O75533 1304 aaKnown RBP eCLIP8.4□□□□□ -1.062e-11■■■■■ 62
ERCC8-202ENST00000381118 ZNF638Q14966 1978 aaKnown RBP8.4□□□□□ -1.06
ERCC8-202ENST00000381118 CES2O00748 559 aa8.4□□□□□ -1.06
ERCC8-202ENST00000381118 GPD1P21695 349 aa8.4□□□□□ -1.06
ERCC8-202ENST00000381118 PAX3P23760 479 aa8.4□□□□□ -1.06
ERCC8-202ENST00000381118 CYP2F1P24903 491 aa8.4□□□□□ -1.06
ERCC8-202ENST00000381118 CTNNA2P26232 953 aa8.4□□□□□ -1.06
ERCC8-202ENST00000381118 TKTL1P51854 596 aa8.4□□□□□ -1.06
ERCC8-202ENST00000381118 SNX16P57768 344 aa8.4□□□□□ -1.06
ERCC8-202ENST00000381118 BTG3Q14201 252 aaPredicted RBP8.4□□□□□ -1.06
ERCC8-202ENST00000381118 SMC1AQ14683 1233 aaKnown RBP8.4□□□□□ -1.06
ERCC8-202ENST00000381118 CTXN3Q4LDR2 81 aa8.4□□□□□ -1.06
ERCC8-202ENST00000381118 KCNT1Q5JUK3 1230 aa8.4□□□□□ -1.06
ERCC8-202ENST00000381118 SPATA2LQ8IUW3 424 aaPredicted RBP8.4□□□□□ -1.06
ERCC8-202ENST00000381118 KLHL7Q8IXQ5 586 aa8.4□□□□□ -1.06
ERCC8-202ENST00000381118 C7orf61Q8IZ16 206 aa8.4□□□□□ -1.06
ERCC8-202ENST00000381118 SIX6OS1Q8N1H7 587 aa8.4□□□□□ -1.06
ERCC8-202ENST00000381118 RASGEF1CQ8N431 466 aa8.4□□□□□ -1.06
ERCC8-202ENST00000381118 STKLD1Q8NE28 680 aa8.4□□□□□ -1.06
ERCC8-202ENST00000381118 ACTRT1Q8TDG2 376 aa8.4□□□□□ -1.06
ERCC8-202ENST00000381118 HSFY1Q96LI6 401 aa8.4□□□□□ -1.06
ERCC8-202ENST00000381118 PKMYT1Q99640 499 aa8.4□□□□□ -1.06
ERCC8-202ENST00000381118 CWH43Q9H720 699 aa8.4□□□□□ -1.06
ERCC8-202ENST00000381118 ZWILCHQ9H900 591 aa8.4□□□□□ -1.06
ERCC8-202ENST00000381118 PRDM10Q9NQV6 1147 aa8.4□□□□□ -1.06
ERCC8-202ENST00000381118 RNF14Q9UBS8 474 aa8.4□□□□□ -1.06
ERCC8-202ENST00000381118 PCSK1NQ9UHG2 260 aa8.4□□□□□ -1.06
ERCC8-202ENST00000381118 TMEM59LQ9UK28 342 aa8.4□□□□□ -1.06
ERCC8-202ENST00000381118 PATJQ8NI35 1801 aa8.4□□□□□ -1.06
ERCC8-202ENST00000381118 C2CD4BA6NLJ0 364 aa8.39□□□□□ -1.07
ERCC8-202ENST00000381118 PI4K2BG5E9Z4 385 aa8.39□□□□□ -1.07
ERCC8-202ENST00000381118 KRIT1O00522 736 aa8.39□□□□□ -1.07
ERCC8-202ENST00000381118 C2CD2LO14523 706 aa8.39□□□□□ -1.07
ERCC8-202ENST00000381118 DYNC1I1O14576 645 aa8.39□□□□□ -1.07
ERCC8-202ENST00000381118 SYN3O14994 580 aa8.39□□□□□ -1.07
ERCC8-202ENST00000381118 PSTPIP1O43586 416 aa8.39□□□□□ -1.07
ERCC8-202ENST00000381118 LRCH4O75427 683 aa8.39□□□□□ -1.07
ERCC8-202ENST00000381118 CPB1P15086 417 aa8.39□□□□□ -1.07
ERCC8-202ENST00000381118 SDC4P31431 198 aa8.39□□□□□ -1.07
ERCC8-202ENST00000381118 MAN1A1P33908 653 aa8.39□□□□□ -1.07
ERCC8-202ENST00000381118 GRIK1P39086 918 aa8.39□□□□□ -1.07
ERCC8-202ENST00000381118 ACADSBP45954 432 aa8.39□□□□□ -1.07
ERCC8-202ENST00000381118 ZNF143P52747 638 aaPredicted RBP8.39□□□□□ -1.07
ERCC8-202ENST00000381118 ODF2Q5BJF6 829 aa8.39□□□□□ -1.07
ERCC8-202ENST00000381118 PRSS55Q6UWB4 352 aaPredicted RBP8.39□□□□□ -1.07
ERCC8-202ENST00000381118 C16orf59Q7L2K0 433 aa8.39□□□□□ -1.07
ERCC8-202ENST00000381118 UBE2Q1Q7Z7E8 422 aa8.39□□□□□ -1.07
ERCC8-202ENST00000381118 ZDHHC17Q8IUH5 632 aa8.39□□□□□ -1.07
ERCC8-202ENST00000381118 ARFGAP1Q8N6T3 406 aa8.39□□□□□ -1.07
ERCC8-202ENST00000381118 SPATA18Q8TC71 538 aa8.39□□□□□ -1.07
ERCC8-202ENST00000381118 KHSRPQ92945 711 aaKnown RBP eCLIP8.39□□□□□ -1.079e-6■■■□□ 17.9
ERCC8-202ENST00000381118 RNF25Q96BH1 459 aaPredicted RBP8.39□□□□□ -1.07
ERCC8-202ENST00000381118 RPGRIP1Q96KN7 1286 aa8.39□□□□□ -1.07
ERCC8-202ENST00000381118 YME1L1Q96TA2 773 aa8.39□□□□□ -1.07
ERCC8-202ENST00000381118 KRT12Q99456 494 aa8.39□□□□□ -1.07
ERCC8-202ENST00000381118 TMEM175Q9BSA9 504 aa8.39□□□□□ -1.07
ERCC8-202ENST00000381118 NGRNQ9NPE2 291 aaKnown RBP8.39□□□□□ -1.07
ERCC8-202ENST00000381118 IL23AQ9NPF7 189 aa8.39□□□□□ -1.07
ERCC8-202ENST00000381118 RNF8O76064 485 aa8.39□□□□□ -1.07
ERCC8-202ENST00000381118 OAZ2O95190 189 aa8.39□□□□□ -1.07
ERCC8-202ENST00000381118 USP17L7P0C7H9 530 aa8.39□□□□□ -1.07
ERCC8-202ENST00000381118 TFE3P19532 575 aaPredicted RBP8.39□□□□□ -1.07
ERCC8-202ENST00000381118 RPL34P49207 117 aaKnown RBP8.39□□□□□ -1.07
ERCC8-202ENST00000381118 MRPS5P82675 430 aaKnown RBP8.39□□□□□ -1.07
ERCC8-202ENST00000381118 SLC7A5Q01650 507 aa8.39□□□□□ -1.07
ERCC8-202ENST00000381118 ADCY1Q08828 1119 aa8.39□□□□□ -1.07
ERCC8-202ENST00000381118 MAPRE1Q15691 268 aaKnown RBP8.39□□□□□ -1.07
ERCC8-202ENST00000381118 CCDC14Q49A88 953 aa8.39□□□□□ -1.07
ERCC8-202ENST00000381118 ZNF280DQ6N043 979 aa8.39□□□□□ -1.07
ERCC8-202ENST00000381118 SCYL2Q6P3W7 929 aa8.39□□□□□ -1.07
ERCC8-202ENST00000381118 C4orf50Q6ZRC1 276 aa8.39□□□□□ -1.07
ERCC8-202ENST00000381118 FAM43BQ6ZT52 329 aaPredicted RBP8.39□□□□□ -1.07
ERCC8-202ENST00000381118 ZNF365Q70YC5 407 aa8.39□□□□□ -1.07
ERCC8-202ENST00000381118 SCN4BQ8IWT1 228 aa8.39□□□□□ -1.07
ERCC8-202ENST00000381118 NIPA2Q8N8Q9 360 aa8.39□□□□□ -1.07
ERCC8-202ENST00000381118 FNIP1Q8TF40 1166 aa8.39□□□□□ -1.07
ERCC8-202ENST00000381118 ZNF689Q96CS4 500 aaPredicted RBP8.39□□□□□ -1.07
ERCC8-202ENST00000381118 HEMGNQ9BXL5 484 aa8.39□□□□□ -1.07
ERCC8-202ENST00000381118 ULBP1Q9BZM6 244 aa8.39□□□□□ -1.07
ERCC8-202ENST00000381118 ZCWPW1Q9H0M4 648 aa8.39□□□□□ -1.07
ERCC8-202ENST00000381118 DDX47Q9H0S4 455 aaKnown RBP8.39□□□□□ -1.07
ERCC8-202ENST00000381118 ANKZF1Q9H8Y5 726 aa8.39□□□□□ -1.07
ERCC8-202ENST00000381118 ASNSD1Q9NWL6 643 aa8.39□□□□□ -1.07
ERCC8-202ENST00000381118 NR2E1Q9Y466 385 aa8.39□□□□□ -1.07
ERCC8-202ENST00000381118 CHD7Q9P2D1 2997 aa8.38□□□□□ -1.07
ERCC8-202ENST00000381118 SYNJ2BP-COX16A0A087WUM0 186 aa8.38□□□□□ -1.07
ERCC8-202ENST00000381118 TCRBV7S2A1N4TA0A589 114 aa8.38□□□□□ -1.07
ERCC8-202ENST00000381118 ZMYND10O75800 440 aa8.38□□□□□ -1.07
ERCC8-202ENST00000381118 KRT1P04264 644 aa8.38□□□□□ -1.07
ERCC8-202ENST00000381118 RPL17P18621 184 aaKnown RBP8.38□□□□□ -1.07
ERCC8-202ENST00000381118 FGFR3P22607 806 aa8.38□□□□□ -1.07
ERCC8-202ENST00000381118 IL1R2P27930 398 aa8.38□□□□□ -1.07
ERCC8-202ENST00000381118 MIPP30301 263 aa8.38□□□□□ -1.07
ERCC8-202ENST00000381118 GPR15P49685 360 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms