RNA–Protein interactions for RNA: ENST00000381089.7

VCX3A-201, Transcript of variable charge X-linked 3A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VCX3A, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-201ENST00000381089 OR5B17Q8NGF7 314 aa17.05■□□□□ 0.32
VCX3A-201ENST00000381089 PCED1BQ96HM7 432 aa17.05■□□□□ 0.32
VCX3A-201ENST00000381089 FAM84AQ96KN4 292 aa17.05■□□□□ 0.32
VCX3A-201ENST00000381089 CLIC6Q96NY7 704 aa17.05■□□□□ 0.32
VCX3A-201ENST00000381089 ELOVL4Q9GZR5 314 aa17.05■□□□□ 0.32
VCX3A-201ENST00000381089 SLC32A1Q9H598 525 aa17.05■□□□□ 0.32
VCX3A-201ENST00000381089 SMPD4Q9NXE4 827 aa17.05■□□□□ 0.32
VCX3A-201ENST00000381089 F8VP50 259 aa17.04■□□□□ 0.32
VCX3A-201ENST00000381089 TNFRSF10BO14763 440 aa17.04■□□□□ 0.32
VCX3A-201ENST00000381089 KAT7O95251 611 aa17.04■□□□□ 0.32
VCX3A-201ENST00000381089 KLF8O95600 359 aaPredicted RBP17.04■□□□□ 0.32
VCX3A-201ENST00000381089 FAM163BP0C2L3 166 aa17.04■□□□□ 0.32
VCX3A-201ENST00000381089 MBL2P11226 248 aaPredicted RBP17.04■□□□□ 0.32
VCX3A-201ENST00000381089 TIE1P35590 1138 aa17.04■□□□□ 0.32
VCX3A-201ENST00000381089 GNL1P36915 607 aaPredicted RBP17.04■□□□□ 0.32
VCX3A-201ENST00000381089 GRIA2P42262 883 aa17.04■□□□□ 0.32
VCX3A-201ENST00000381089 USP46P62068 366 aa17.04■□□□□ 0.32
VCX3A-201ENST00000381089 TNNC1P63316 161 aa17.04■□□□□ 0.32
VCX3A-201ENST00000381089 TRIM61Q5EBN2 209 aa17.04■□□□□ 0.32
VCX3A-201ENST00000381089 MDH1BQ5I0G3 518 aa17.04■□□□□ 0.32
VCX3A-201ENST00000381089 SPDYCQ5MJ68 293 aa17.04■□□□□ 0.32
VCX3A-201ENST00000381089 SCARA3Q6AZY7 606 aa17.04■□□□□ 0.32
VCX3A-201ENST00000381089 NUDT18Q6ZVK8 323 aa17.04■□□□□ 0.32
VCX3A-201ENST00000381089 PGBD3Q8N328 593 aa17.04■□□□□ 0.32
VCX3A-201ENST00000381089 ALLCQ8N6M5 410 aa17.04■□□□□ 0.32
VCX3A-201ENST00000381089 TXNDC5Q8NBS9 432 aaKnown RBP17.04■□□□□ 0.32
VCX3A-201ENST00000381089 PDZD8Q8NEN9 1154 aa17.04■□□□□ 0.32
VCX3A-201ENST00000381089 OR6B3Q8NGW1 331 aa17.04■□□□□ 0.32
VCX3A-201ENST00000381089 FNBP1Q96RU3 617 aa17.04■□□□□ 0.32
VCX3A-201ENST00000381089 ADAM33Q9BZ11 813 aa17.04■□□□□ 0.32
VCX3A-201ENST00000381089 ARHGEF4Q9NR80 690 aa17.04■□□□□ 0.32
VCX3A-201ENST00000381089 CFAP97Q9P2B7 532 aa17.04■□□□□ 0.32
VCX3A-201ENST00000381089 FRYQ5TBA9 3013 aa17.04■□□□□ 0.32
VCX3A-201ENST00000381089 C1QTNF9BB2RNN3 333 aa17.03■□□□□ 0.32
VCX3A-201ENST00000381089 PATE3B3GLJ2 98 aa17.03■□□□□ 0.32
VCX3A-201ENST00000381089 CDX4O14627 284 aaPredicted RBP17.03■□□□□ 0.32
VCX3A-201ENST00000381089 TACC1O75410 805 aa17.03■□□□□ 0.32
VCX3A-201ENST00000381089 OLFM2O95897 454 aa17.03■□□□□ 0.32
VCX3A-201ENST00000381089 C1QTNF9P0C862 333 aa17.03■□□□□ 0.32
VCX3A-201ENST00000381089 ADH5P11766 374 aa17.03■□□□□ 0.32
VCX3A-201ENST00000381089 TNNI1P19237 187 aa17.03■□□□□ 0.32
VCX3A-201ENST00000381089 P2RY2P41231 377 aa17.03■□□□□ 0.32
VCX3A-201ENST00000381089 TNFRSF4P43489 277 aa17.03■□□□□ 0.32
VCX3A-201ENST00000381089 IRX4P78413 519 aa17.03■□□□□ 0.32
VCX3A-201ENST00000381089 ZXDBP98169 803 aa17.03■□□□□ 0.32
VCX3A-201ENST00000381089 CEBPZQ03701 1054 aaKnown RBP17.03■□□□□ 0.32
VCX3A-201ENST00000381089 TAF10Q12962 218 aa17.03■□□□□ 0.32
VCX3A-201ENST00000381089 GAB4Q2WGN9 574 aa17.03■□□□□ 0.32
VCX3A-201ENST00000381089 BTBD8Q5XKL5 378 aa17.03■□□□□ 0.32
VCX3A-201ENST00000381089 TMEM92Q6UXU6 159 aa17.03■□□□□ 0.32
VCX3A-201ENST00000381089 TRAPPC11Q7Z392 1133 aa17.03■□□□□ 0.32
VCX3A-201ENST00000381089 TRMT11Q7Z4G4 463 aaKnown RBP17.03■□□□□ 0.32
VCX3A-201ENST00000381089 CBWD2Q8IUF1 395 aa17.03■□□□□ 0.32
VCX3A-201ENST00000381089 SYT12Q8IV01 421 aa17.03■□□□□ 0.32
VCX3A-201ENST00000381089 IL17RCQ8NAC3 791 aa17.03■□□□□ 0.32
VCX3A-201ENST00000381089 OLIG1Q8TAK6 271 aa17.03■□□□□ 0.32
VCX3A-201ENST00000381089 OTUB2Q96DC9 234 aa17.03■□□□□ 0.32
VCX3A-201ENST00000381089 FGFBP2Q9BYJ0 223 aa17.03■□□□□ 0.32
VCX3A-201ENST00000381089 RNF38Q9H0F5 515 aa17.03■□□□□ 0.32
VCX3A-201ENST00000381089 HSPBP1Q9NZL4 362 aa17.03■□□□□ 0.32
VCX3A-201ENST00000381089 ZMIZ1Q9ULJ6 1067 aa17.03■□□□□ 0.32
VCX3A-201ENST00000381089 FAM208BQ5VWN6 2430 aa17.03■□□□□ 0.32
VCX3A-201ENST00000381089 ATP8B3O60423 1300 aa17.02■□□□□ 0.32
VCX3A-201ENST00000381089 PTPRJQ12913 1337 aa17.02■□□□□ 0.32
VCX3A-201ENST00000381089 PTPRDP23468 1912 aa17.02■□□□□ 0.32
VCX3A-201ENST00000381089 ZBTB24O43167 697 aaPredicted RBP17.02■□□□□ 0.32
VCX3A-201ENST00000381089 RTN3O95197 1032 aaPredicted RBP17.02■□□□□ 0.32
VCX3A-201ENST00000381089 OAS1P00973 400 aaKnown RBP17.02■□□□□ 0.32
VCX3A-201ENST00000381089 DLATP10515 647 aaKnown RBP17.02■□□□□ 0.32
VCX3A-201ENST00000381089 SLC6A11P48066 632 aa17.02■□□□□ 0.32
VCX3A-201ENST00000381089 ATXN3P54252 364 aaPredicted RBP17.02■□□□□ 0.32
VCX3A-201ENST00000381089 GAD2Q05329 585 aa17.02■□□□□ 0.32
VCX3A-201ENST00000381089 IFRD2Q12894 506 aaPredicted RBP17.02■□□□□ 0.32
VCX3A-201ENST00000381089 LYSMD4Q5XG99 296 aa17.02■□□□□ 0.32
VCX3A-201ENST00000381089 KDF1Q8NAX2 398 aaPredicted RBP17.02■□□□□ 0.32
VCX3A-201ENST00000381089 HMGB4Q8WW32 186 aa17.02■□□□□ 0.32
VCX3A-201ENST00000381089 OVCA2Q8WZ82 227 aa17.02■□□□□ 0.32
VCX3A-201ENST00000381089 PANK2Q9BZ23 570 aa17.02■□□□□ 0.32
VCX3A-201ENST00000381089 CACNA1GO43497 2377 aa17.02■□□□□ 0.31
VCX3A-201ENST00000381089 A0A0A0MRY4 1105 aa17.01■□□□□ 0.31
VCX3A-201ENST00000381089 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.01■□□□□ 0.31
VCX3A-201ENST00000381089 E2F8A0AVK6 867 aa17.01■□□□□ 0.31
VCX3A-201ENST00000381089 SGK1O00141 431 aa17.01■□□□□ 0.31
VCX3A-201ENST00000381089 EIF3DO15371 548 aaKnown RBP eCLIP17.01■□□□□ 0.31
VCX3A-201ENST00000381089 PTPN1P18031 435 aaKnown RBP17.01■□□□□ 0.31
VCX3A-201ENST00000381089 YWHAQP27348 245 aa17.01■□□□□ 0.31
VCX3A-201ENST00000381089 RDXP35241 583 aaKnown RBP17.01■□□□□ 0.31
VCX3A-201ENST00000381089 HOXD12P35452 270 aa17.01■□□□□ 0.31
VCX3A-201ENST00000381089 AMPD3Q01432 767 aa17.01■□□□□ 0.31
VCX3A-201ENST00000381089 KDSRQ06136 332 aa17.01■□□□□ 0.31
VCX3A-201ENST00000381089 TRPC3Q13507 836 aa17.01■□□□□ 0.31
VCX3A-201ENST00000381089 SNRNP35Q16560 246 aaKnown RBP17.01■□□□□ 0.31
VCX3A-201ENST00000381089 WDR72Q3MJ13 1102 aa17.01■□□□□ 0.31
VCX3A-201ENST00000381089 RHBDF2Q6PJF5 856 aa17.01■□□□□ 0.31
VCX3A-201ENST00000381089 ARMCX6Q7L4S7 300 aa17.01■□□□□ 0.31
VCX3A-201ENST00000381089 RABEPKQ7Z6M1 372 aa17.01■□□□□ 0.31
VCX3A-201ENST00000381089 TMEFF1Q8IYR6 380 aa17.01■□□□□ 0.31
VCX3A-201ENST00000381089 NUP93Q8N1F7 819 aa17.01■□□□□ 0.31
VCX3A-201ENST00000381089 DEFB124Q8NES8 71 aa17.01■□□□□ 0.31
VCX3A-201ENST00000381089 KCNV2Q8TDN2 545 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms