RNA–Protein interactions for RNA: ENST00000380805.6

GMDS-201, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 2

Gene GMDS, Length 1,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-201ENST00000380805 PEBP4Q96S96 227 aa20.17■□□□□ 0.82
GMDS-201ENST00000380805 CDC42EP4Q9H3Q1 356 aaKnown RBP20.17■□□□□ 0.82
GMDS-201ENST00000380805 RSAD1Q9HA92 442 aa20.17■□□□□ 0.82
GMDS-201ENST00000380805 FAM105AQ9NUU6 356 aa20.17■□□□□ 0.82
GMDS-201ENST00000380805 ST3GAL5Q9UNP4 418 aa20.17■□□□□ 0.82
GMDS-201ENST00000380805 CHRNA1P02708 482 aa20.16■□□□□ 0.82
GMDS-201ENST00000380805 CHKAP35790 457 aa20.16■□□□□ 0.82
GMDS-201ENST00000380805 TRIP13Q15645 432 aaPredicted RBP20.16■□□□□ 0.82
GMDS-201ENST00000380805 CCDC14Q49A88 953 aa20.16■□□□□ 0.82
GMDS-201ENST00000380805 CEP128Q6ZU80 1094 aa20.16■□□□□ 0.82
GMDS-201ENST00000380805 SLC26A9Q7LBE3 791 aa20.16■□□□□ 0.82
GMDS-201ENST00000380805 HACE1Q8IYU2 909 aa20.16■□□□□ 0.82
GMDS-201ENST00000380805 GSTCDQ8NEC7 633 aa20.16■□□□□ 0.82
GMDS-201ENST00000380805 TNIP3Q96KP6 325 aa20.16■□□□□ 0.82
GMDS-201ENST00000380805 TBCBQ99426 244 aa20.16■□□□□ 0.82
GMDS-201ENST00000380805 SNX25Q9H3E2 840 aa20.16■□□□□ 0.82
GMDS-201ENST00000380805 GOLGA2P5Q9HBQ8 144 aa20.16■□□□□ 0.82
GMDS-201ENST00000380805 PCDH9Q9HC56 1237 aa20.16■□□□□ 0.82
GMDS-201ENST00000380805 RNF19AQ9NV58 838 aa20.16■□□□□ 0.82
GMDS-201ENST00000380805 SLC38A7Q9NVC3 462 aa20.16■□□□□ 0.82
GMDS-201ENST00000380805 ZNF148Q9UQR1 794 aa20.16■□□□□ 0.82
GMDS-201ENST00000380805 SRRM3A6NNA2 597 aaPredicted RBP20.16■□□□□ 0.82
GMDS-201ENST00000380805 DNALI1O14645 258 aaPredicted RBP20.16■□□□□ 0.82
GMDS-201ENST00000380805 EIF3HO15372 352 aaKnown RBP eCLIP20.16■□□□□ 0.82
GMDS-201ENST00000380805 HUS1O60921 280 aa20.16■□□□□ 0.82
GMDS-201ENST00000380805 GNRH1P01148 92 aa20.16■□□□□ 0.82
GMDS-201ENST00000380805 HOXD10P28358 340 aa20.16■□□□□ 0.82
GMDS-201ENST00000380805 PTPN9P43378 593 aa20.16■□□□□ 0.82
GMDS-201ENST00000380805 RGS7P49802 495 aa20.16■□□□□ 0.82
GMDS-201ENST00000380805 CACNB2Q08289 660 aaPredicted RBP20.16■□□□□ 0.82
GMDS-201ENST00000380805 TNFAIP8L3Q5GJ75 292 aa20.16■□□□□ 0.82
GMDS-201ENST00000380805 IZUMO3Q5VZ72 239 aa20.16■□□□□ 0.82
GMDS-201ENST00000380805 LRRC31Q6UY01 552 aa20.16■□□□□ 0.82
GMDS-201ENST00000380805 ADGRF2Q8IZF7 708 aa20.16■□□□□ 0.82
GMDS-201ENST00000380805 HSFY1Q96LI6 401 aa20.16■□□□□ 0.82
GMDS-201ENST00000380805 C11orf84Q9BUA3 381 aaPredicted RBP20.16■□□□□ 0.82
GMDS-201ENST00000380805 ROPN1BQ9BZX4 212 aaPredicted RBP20.16■□□□□ 0.82
GMDS-201ENST00000380805 ADAM7Q9H2U9 754 aa20.16■□□□□ 0.82
GMDS-201ENST00000380805 ROPN1Q9HAT0 212 aaPredicted RBP20.16■□□□□ 0.82
GMDS-201ENST00000380805 LRRC4CQ9HCJ2 640 aa20.16■□□□□ 0.82
GMDS-201ENST00000380805 SLC12A6Q9UHW9 1150 aa20.16■□□□□ 0.82
GMDS-201ENST00000380805 ERICH4A6NGS2 130 aa20.15■□□□□ 0.82
GMDS-201ENST00000380805 ZNF487B1APH4 448 aa20.15■□□□□ 0.82
GMDS-201ENST00000380805 APOC4-APOC2K7ER74 178 aa20.15■□□□□ 0.82
GMDS-201ENST00000380805 GABRDO14764 452 aa20.15■□□□□ 0.82
GMDS-201ENST00000380805 CST8O60676 142 aa20.15■□□□□ 0.82
GMDS-201ENST00000380805 APOC2P02655 101 aa20.15■□□□□ 0.82
GMDS-201ENST00000380805 CD48P09326 243 aa20.15■□□□□ 0.82
GMDS-201ENST00000380805 LMO2P25791 158 aa20.15■□□□□ 0.82
GMDS-201ENST00000380805 ACADSBP45954 432 aa20.15■□□□□ 0.82
GMDS-201ENST00000380805 GSTA5Q7RTV2 222 aa20.15■□□□□ 0.82
GMDS-201ENST00000380805 MRPL10Q7Z7H8 261 aaKnown RBP20.15■□□□□ 0.82
GMDS-201ENST00000380805 ZCCHC9Q8N567 271 aaKnown RBP20.15■□□□□ 0.82
GMDS-201ENST00000380805 XPNPEP3Q9NQH7 507 aa20.15■□□□□ 0.82
GMDS-201ENST00000380805 PCSK1NQ9UHG2 260 aa20.15■□□□□ 0.82
GMDS-201ENST00000380805 HCRTO43612 131 aa20.14■□□□□ 0.81
GMDS-201ENST00000380805 TTC4O95801 387 aa20.14■□□□□ 0.81
GMDS-201ENST00000380805 OTUD4Q01804 1114 aaKnown RBP20.14■□□□□ 0.81
GMDS-201ENST00000380805 ARHGEF6Q15052 776 aa20.14■□□□□ 0.81
GMDS-201ENST00000380805 ZSCAN26Q16670 478 aa20.14■□□□□ 0.81
GMDS-201ENST00000380805 BOLA3Q53S33 107 aa20.14■□□□□ 0.81
GMDS-201ENST00000380805 UBAP2Q5T6F2 1119 aaKnown RBP20.14■□□□□ 0.81
GMDS-201ENST00000380805 ZNF618Q5T7W0 954 aa20.14■□□□□ 0.81
GMDS-201ENST00000380805 MFSD5Q6N075 450 aa20.14■□□□□ 0.81
GMDS-201ENST00000380805 GLIS1Q8NBF1 620 aa20.14■□□□□ 0.81
GMDS-201ENST00000380805 KCTD6Q8NC69 237 aa20.14■□□□□ 0.81
GMDS-201ENST00000380805 ACTL9Q8TC94 416 aa20.14■□□□□ 0.81
GMDS-201ENST00000380805 CENPIQ92674 756 aaPredicted RBP20.14■□□□□ 0.81
GMDS-201ENST00000380805 HNRNPABQ99729 332 aaKnown RBP20.14■□□□□ 0.81
GMDS-201ENST00000380805 MDM4O15151 490 aa20.13■□□□□ 0.81
GMDS-201ENST00000380805 GPR182O15218 404 aa20.13■□□□□ 0.81
GMDS-201ENST00000380805 CCDC130P13994 396 aa20.13■□□□□ 0.81
GMDS-201ENST00000380805 ELNP15502 786 aa20.13■□□□□ 0.81
GMDS-201ENST00000380805 SDC4P31431 198 aa20.13■□□□□ 0.81
GMDS-201ENST00000380805 GNGT1P63211 74 aa20.13■□□□□ 0.81
GMDS-201ENST00000380805 TRIM32Q13049 653 aa20.13■□□□□ 0.81
GMDS-201ENST00000380805 PDK2Q15119 407 aa20.13■□□□□ 0.81
GMDS-201ENST00000380805 TAF5Q15542 800 aa20.13■□□□□ 0.81
GMDS-201ENST00000380805 CCDC142Q17RM4 750 aa20.13■□□□□ 0.81
GMDS-201ENST00000380805 C15orf59Q2T9L4 293 aaPredicted RBP20.13■□□□□ 0.81
GMDS-201ENST00000380805 P3H1Q32P28 736 aa20.13■□□□□ 0.81
GMDS-201ENST00000380805 C6orf118Q5T5N4 469 aa20.13■□□□□ 0.81
GMDS-201ENST00000380805 SH3PXD2AQ5TCZ1 1133 aa20.13■□□□□ 0.81
GMDS-201ENST00000380805 OSTM1Q86WC4 334 aa20.13■□□□□ 0.81
GMDS-201ENST00000380805 B3GALNT2Q8NCR0 500 aa20.13■□□□□ 0.81
GMDS-201ENST00000380805 ZFP42Q96MM3 310 aa20.13■□□□□ 0.81
GMDS-201ENST00000380805 GIT1Q9Y2X7 761 aa20.13■□□□□ 0.81
GMDS-201ENST00000380805 TSC2P49815 1807 aa20.13■□□□□ 0.81
GMDS-201ENST00000380805 PIK3R2O00459 728 aa20.13■□□□□ 0.81
GMDS-201ENST00000380805 XPO1O14980 1071 aaKnown RBP20.13■□□□□ 0.81
GMDS-201ENST00000380805 PRPSAP2O60256 369 aa20.13■□□□□ 0.81
GMDS-201ENST00000380805 ZNF623O75123 536 aa20.13■□□□□ 0.81
GMDS-201ENST00000380805 CAND2O75155 1236 aa20.13■□□□□ 0.81
GMDS-201ENST00000380805 TCEA3O75764 348 aa20.13■□□□□ 0.81
GMDS-201ENST00000380805 ASGR1P07306 291 aa20.13■□□□□ 0.81
GMDS-201ENST00000380805 MDH1P40925 334 aaKnown RBP20.13■□□□□ 0.81
GMDS-201ENST00000380805 VPS41P49754 854 aa20.13■□□□□ 0.81
GMDS-201ENST00000380805 MORF4L2Q15014 288 aa20.13■□□□□ 0.81
GMDS-201ENST00000380805 DNAJC21Q5F1R6 531 aaKnown RBP20.13■□□□□ 0.81
GMDS-201ENST00000380805 SCUBE3Q8IX30 993 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 143.3 ms